FB2026_03 , released September 17, 2026
Transcript: Dmel\Prp39-RA
Open Close
General Information
Symbol
Dmel\Prp39-RA
Species
D. melanogaster
Annotation Symbol
CG1646-RA
FlyBase ID
FBtr0085323
Feature type
mRNA
Associated gene
Dmel\Prp39
Evidence Rank
Length (nt)
3563
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 36 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
      cDNA Clones, End Sequence Only (ESTs)
      Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
      Sequence
      Sequence Downloader
      TTGCAATGTTAATATGGCGTCAGAGGGCGAAAACGTTGTTATGGAAAGTCCAGCCCATTTCGGTAGCTGACACTGACAGT
TAGCTGGAGCAGCCCATTAAAGCATTTGGAAAAAAGTGAACATCACGAGGCAGCGAACAACCCACAACACCGCGCGTACA
GTTTATGTAAACCGCATGGATTAACCAAGAAAGTTAATTGACGTTTTCCAGGTCGCCGCACACGTTCTGGTCGGAAGGCC
GCATCCCCGGCTGCATCGCTGCCAACCAGAAGCACCCGGCGCACATCCAAGCGGAACGTACAGCTAAGTGACCACGAAGA
GGAGGCCGAAGAGCAAGTGGTCATGGTTCAGGAAGAGGAGGAGCCCTTTAGAGGGACAAACACTGCGGAGGCACCTGCTT
TGGAGCCCCAATTCGAGGAGACTCAGCACCAGATAGAGGATGACGTGGAAATGCTGCCAGCCGAAGCTGCTGGGGTTGAT
GAAAAGAGCTCTTCCTTCCCGTTTGGCACGGTGGCGGAGCTGCATTCAGAGACTAGTGATGATATTAAAGAGACACGCGG
TCAGGCTGGCGTGGACACCCTACTGGCTTCTTTAGCCGGCGATAATGCCAACAGCCTGCCCTCCGTGGGTGGAAATGACG
AGAGTGACAATGTCAAGAAGGCGGACTTTGAGTACAATGTAGACTCCCTGCAGCCGCAGATGGAGAAAATGAATTCCTCT
GAGGACTCCAGCTCACAACATGCCATTGCCGAGGATCTGGCCGATGCGGACACCAGCAATGCAACCATTGTCAACACAGA
GATAGTCTCCGAGGATGAGCTACCTCTGCCCAGCAAGCCTGAAATAAATGATGCCGAGGAAGTTTCCGATGAAGAGCTTC
CAGCACCGCAGCGGGCTGAATTGCCAGAGGATGCTGAAGTAATCTCGGAGGATGAACTGCCCGCCAGTAATAACAATAAC
ACCGCCACTGAGCCCAAGGCACCTTTGAAGCGCAAGGCGGAAAACGAAAGCGTTAAGAGCACCGAAGATAAGGATGCAAG
CAGTCATGAATCAAGCACAAAGGATAAATCCTCCGAGCAATATAATCCGGGCAGTCCCACATCTGAGAGCAACGACGCAC
AGCCCTCAGAGAAAAAACTCAAGGTCGAAGAATCGGAGCCCAAGGAGAAAAAGAAGGAAAAGGAGCGCGATAAAGATAAG
GAGAAGGATAAGGACAAAGATAATAATAAGGATAAGGAAAAGGAGCGAAAGAAGCTGCCGGACCTAGATAAGTACTGGAG
AGCTGTCAAAGAAGACTCCACCGACTTCACCGGCTGGACGTACTTGCTGCAATATGTTGACAATGAGTCTGATGCGGAGG
CGGCGCGCGAGGCCTACGACACATTCCTGTCCCACTATCCTTACTGCTACGGATATTGGCGCAAGTATGCCGACTACGAG
AAGCGCAAGGGCATCAAGGCAAACTGCTATAAGGTGTTTGAGCGCGGACTGGAGGCGATTCCGCTGTCCGTGGATCTGTG
GATCCACTACCTAATGCACGTTAAGTCCAATCACGGAGATGATGAAACATTCGTCCGCTCCCAGTATGAAAGGGCAGTGA
AGGCGTGCGGCCTGGAATTTCGATCGGACAAACTCTGGGATGCCTACATTCGTTGGGAGAACGAGTCAAAGCGGTACCAC
CGTGTGGTCCAGATCTACGATAGACTTCTGGCCATACCGACACAGGGCTATAATGGTCACTTCGACAATTTCCAAGATTT
GATCAATCAGCATGATGTAACTATCACACTTGCAAACGAGGAGGTGATCCGTCTGCGCAAAGACTTCCACGAACGTCAGC
AGAGCAAGTCCTCCAAGTCCTCGTCGAAGCATCGCCGGGACAGCAGCAGCAGCTCCAAGGACAAAGACTCAAAGGAGCGA
GAACGTGAGAAGGACAAGGATAAGGACAAAGACAAGGACAAGGAGAAGCGAGAAACTGTCGGGGGCGGTGTTGGTAAGTC
GCCAAAAGATACAAGTGAAACTCAAGTCGATGAATCAGATAGTACTACCGATCTGACCACCGAAAGCGAGTCATCGCATG
CAGCTTCAAAGCCGGCAATGCAGATCGATTTCAGTGATCTTAGCACTCTGAATGACGAAGAGGTGGTCAGCATTAGGGAC
AGGGCTATCTCGGCGCGGCGCAAAGTCCACAAGTTGACCGTTAGCGCAGTGACAGCCCGCTGGTCCTTCGAGGAGGGCAT
CAAGCGGCCTTATTTCCATGTGAAGCCACTCGAGAGGGCACAGCTCAAGAATTGGAAGGACTACTTGGATTTCGAGATCG
AAAAGGGTGATCGCGAGCGAGTCCTGGTTTTGTTCGAAAGGTGCCTAATCGCCTGTGCTTTGTATGACGAGTTCTGGCTG
AAGATGCTTCGTTATTTAGAGTCTTTGGAGGATCAGAGCGGAGTTGTGGATCTGGTACGTGATGTTTACCGCCGCGCCTG
TCGCATCCATCATCCGGACAAACCGAGTCTGCACCTGATGTGGGCCGCCTTCGAGGAATGCCAGATGAACTTTGACGACG
CCGCTGAAATTTTGCAGCGTATCGATCAGCGCTGCCCCAATCTCCTGCAGCTTTCCTATCGTCGTATCAACGTGGAAAGG
CGTCGAGGAGCACTGGACAAGTGTCGCGAGCTGTACAAGCACTATATAGAGAGTACAAAGAACAAGGGCATTGCCGGCAG
TCTGGCCATCAAGTATGCCCGTTTCCTCAATAAAATCTGTCATGATCTCGACGCCGGCTTGGCCGCCCTGCAGCAGGCGC
TGGAACGTGATCCAGCCAACACTCGTGTGGCCCTGCAAATGATCGATTTGTGCCTACAGCGCCCAAAAGTCGATGAGCAG
GAGGTAGTCGAAATTATGGATAAGTTCATGGCTCGTGCGGACATCGAACCCGATCAGAAGGTTTTGTTTGCCCAGCGCAA
AGTGGAGTTCCTTGAGGATTTCGGCAGCACGGCCAGGGGTCTACAAGACGCACAGCGCGCTCTGCAGCAGGCACTCACTA
AAGCCAAGGAAGCGCAAAAGAAAAGTGATGGCAGTCCTAGTCGCAAAAACTCATCAAGCAGCAAAGAAGGTCCTGTCCCC
ACAGGATCCGCGGCGGCAGCTTACAACAATGGTGGCTCGGCCGCAGCAGTCGCAGGCTACAACTATGGAGCAGCAAATCC
ATACTATGGTCAGCAGAATACCGCAGCAGCCTATCCCTCACAGACGCCACAACAGGCGTCCTACGACTCTTACTACAATC
AGTGGGGCTACGGTTCCGGTGGGGCCAGCGCCAACAGTGGTGGTAGCGGCTACAACTACGGCCAGTGGAGCGGTTATGGC
AACTACTATTAAGTTCGCTGCCTAGATGTAACCCACTCCGCCACCTGTAGCTCTAAGACGCTACGGCTTGTTTAGTTTTG
CCTTGCTGCTCTGTTAAGTTGTACACATCTAATTGTAATTTTTTATCAACCCCTATTTGAGCCCACAAAATAACCCCACC
ATTGCGAAAAATAAAATATACCAGCTTTTTATCGGTCCACCAT
      Other Products of this Gene
      Other Transcripts
      Name
      FlyBase ID
      Length (nt)
      Prp39-RB
      FBtr0085322
      3405
      Prp39-RC
      FBtr0085325
      3573
      Prp39-RE
      FBtr0113299
      3582
      Prp39-RH
      FBtr0113301
      4604
      Polypeptides
      Derived from THIS transcript
      Name
      FlyBase ID
      Length (aa)
      Prp39-PA
      FBpp0084692
      1009
      Derived from OTHER transcripts
      Name
      FlyBase ID
      Length (aa)
      Prp39-PB
      FBpp0084691
      1066
      Prp39-PC
      FBpp0084694
      1009
      Prp39-PE
      FBpp0112211
      1009
      Prp39-PH
      FBpp0112213
      501
      Comments

      Transcript terminates at site supported by polyadenylated cDNA.

      External Crossreferences and Linkouts ( 1 )
      Crossreferences
      RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
      Synonyms and Secondary IDs (2)
      Reported As
      Symbol Synonym
      CG1646-RA
      (FlyBase, 1996-)
      Prp39-RA
      Secondary FlyBase IDs
        References (2)