FB2026_03 , released September 17, 2026
Transcript: Dmel\Prp39-RC
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General Information
Symbol
Dmel\Prp39-RC
Species
D. melanogaster
Annotation Symbol
CG1646-RC
FlyBase ID
FBtr0085325
Feature type
mRNA
Associated gene
Dmel\Prp39
Evidence Rank
Length (nt)
3573
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 31 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        Contained within the annotated transcript, internally consistent
        End(s) extend beyond the annotated transcript, internally consistent
        Sequence
        Sequence Downloader
        TTGCAATGTTAATATGGCGTCAGAGGGCGAAAACGTTGTTATGGAAAGTCCAGTCCTTACTAGCCCATTTCGGTAGCTGA
CACTGACAGTTAGCTGGAGCAGCCCATTAAAGCATTTGGAAAAAAGTGAACATCACGAGGCAGCGAACAACCCACAACAC
CGCGCGTACAGTTTATGTAAACCGCATGGATTAACCAAGAAAGTTAATTGACGTTTTCCAGGTCGCCGCACACGTTCTGG
TCGGAAGGCCGCATCCCCGGCTGCATCGCTGCCAACCAGAAGCACCCGGCGCACATCCAAGCGGAACGTACAGCTAAGTG
ACCACGAAGAGGAGGCCGAAGAGCAAGTGGTCATGGTTCAGGAAGAGGAGGAGCCCTTTAGAGGGACAAACACTGCGGAG
GCACCTGCTTTGGAGCCCCAATTCGAGGAGACTCAGCACCAGATAGAGGATGACGTGGAAATGCTGCCAGCCGAAGCTGC
TGGGGTTGATGAAAAGAGCTCTTCCTTCCCGTTTGGCACGGTGGCGGAGCTGCATTCAGAGACTAGTGATGATATTAAAG
AGACACGCGGTCAGGCTGGCGTGGACACCCTACTGGCTTCTTTAGCCGGCGATAATGCCAACAGCCTGCCCTCCGTGGGT
GGAAATGACGAGAGTGACAATGTCAAGAAGGCGGACTTTGAGTACAATGTAGACTCCCTGCAGCCGCAGATGGAGAAAAT
GAATTCCTCTGAGGACTCCAGCTCACAACATGCCATTGCCGAGGATCTGGCCGATGCGGACACCAGCAATGCAACCATTG
TCAACACAGAGATAGTCTCCGAGGATGAGCTACCTCTGCCCAGCAAGCCTGAAATAAATGATGCCGAGGAAGTTTCCGAT
GAAGAGCTTCCAGCACCGCAGCGGGCTGAATTGCCAGAGGATGCTGAAGTAATCTCGGAGGATGAACTGCCCGCCAGTAA
TAACAATAACACCGCCACTGAGCCCAAGGCACCTTTGAAGCGCAAGGCGGAAAACGAAAGCGTTAAGAGCACCGAAGATA
AGGATGCAAGCAGTCATGAATCAAGCACAAAGGATAAATCCTCCGAGCAATATAATCCGGGCAGTCCCACATCTGAGAGC
AACGACGCACAGCCCTCAGAGAAAAAACTCAAGGTCGAAGAATCGGAGCCCAAGGAGAAAAAGAAGGAAAAGGAGCGCGA
TAAAGATAAGGAGAAGGATAAGGACAAAGATAATAATAAGGATAAGGAAAAGGAGCGAAAGAAGCTGCCGGACCTAGATA
AGTACTGGAGAGCTGTCAAAGAAGACTCCACCGACTTCACCGGCTGGACGTACTTGCTGCAATATGTTGACAATGAGTCT
GATGCGGAGGCGGCGCGCGAGGCCTACGACACATTCCTGTCCCACTATCCTTACTGCTACGGATATTGGCGCAAGTATGC
CGACTACGAGAAGCGCAAGGGCATCAAGGCAAACTGCTATAAGGTGTTTGAGCGCGGACTGGAGGCGATTCCGCTGTCCG
TGGATCTGTGGATCCACTACCTAATGCACGTTAAGTCCAATCACGGAGATGATGAAACATTCGTCCGCTCCCAGTATGAA
AGGGCAGTGAAGGCGTGCGGCCTGGAATTTCGATCGGACAAACTCTGGGATGCCTACATTCGTTGGGAGAACGAGTCAAA
GCGGTACCACCGTGTGGTCCAGATCTACGATAGACTTCTGGCCATACCGACACAGGGCTATAATGGTCACTTCGACAATT
TCCAAGATTTGATCAATCAGCATGATGTAACTATCACACTTGCAAACGAGGAGGTGATCCGTCTGCGCAAAGACTTCCAC
GAACGTCAGCAGAGCAAGTCCTCCAAGTCCTCGTCGAAGCATCGCCGGGACAGCAGCAGCAGCTCCAAGGACAAAGACTC
AAAGGAGCGAGAACGTGAGAAGGACAAGGATAAGGACAAAGACAAGGACAAGGAGAAGCGAGAAACTGTCGGGGGCGGTG
TTGGTAAGTCGCCAAAAGATACAAGTGAAACTCAAGTCGATGAATCAGATAGTACTACCGATCTGACCACCGAAAGCGAG
TCATCGCATGCAGCTTCAAAGCCGGCAATGCAGATCGATTTCAGTGATCTTAGCACTCTGAATGACGAAGAGGTGGTCAG
CATTAGGGACAGGGCTATCTCGGCGCGGCGCAAAGTCCACAAGTTGACCGTTAGCGCAGTGACAGCCCGCTGGTCCTTCG
AGGAGGGCATCAAGCGGCCTTATTTCCATGTGAAGCCACTCGAGAGGGCACAGCTCAAGAATTGGAAGGACTACTTGGAT
TTCGAGATCGAAAAGGGTGATCGCGAGCGAGTCCTGGTTTTGTTCGAAAGGTGCCTAATCGCCTGTGCTTTGTATGACGA
GTTCTGGCTGAAGATGCTTCGTTATTTAGAGTCTTTGGAGGATCAGAGCGGAGTTGTGGATCTGGTACGTGATGTTTACC
GCCGCGCCTGTCGCATCCATCATCCGGACAAACCGAGTCTGCACCTGATGTGGGCCGCCTTCGAGGAATGCCAGATGAAC
TTTGACGACGCCGCTGAAATTTTGCAGCGTATCGATCAGCGCTGCCCCAATCTCCTGCAGCTTTCCTATCGTCGTATCAA
CGTGGAAAGGCGTCGAGGAGCACTGGACAAGTGTCGCGAGCTGTACAAGCACTATATAGAGAGTACAAAGAACAAGGGCA
TTGCCGGCAGTCTGGCCATCAAGTATGCCCGTTTCCTCAATAAAATCTGTCATGATCTCGACGCCGGCTTGGCCGCCCTG
CAGCAGGCGCTGGAACGTGATCCAGCCAACACTCGTGTGGCCCTGCAAATGATCGATTTGTGCCTACAGCGCCCAAAAGT
CGATGAGCAGGAGGTAGTCGAAATTATGGATAAGTTCATGGCTCGTGCGGACATCGAACCCGATCAGAAGGTTTTGTTTG
CCCAGCGCAAAGTGGAGTTCCTTGAGGATTTCGGCAGCACGGCCAGGGGTCTACAAGACGCACAGCGCGCTCTGCAGCAG
GCACTCACTAAAGCCAAGGAAGCGCAAAAGAAAAGTGATGGCAGTCCTAGTCGCAAAAACTCATCAAGCAGCAAAGAAGG
TCCTGTCCCCACAGGATCCGCGGCGGCAGCTTACAACAATGGTGGCTCGGCCGCAGCAGTCGCAGGCTACAACTATGGAG
CAGCAAATCCATACTATGGTCAGCAGAATACCGCAGCAGCCTATCCCTCACAGACGCCACAACAGGCGTCCTACGACTCT
TACTACAATCAGTGGGGCTACGGTTCCGGTGGGGCCAGCGCCAACAGTGGTGGTAGCGGCTACAACTACGGCCAGTGGAG
CGGTTATGGCAACTACTATTAAGTTCGCTGCCTAGATGTAACCCACTCCGCCACCTGTAGCTCTAAGACGCTACGGCTTG
TTTAGTTTTGCCTTGCTGCTCTGTTAAGTTGTACACATCTAATTGTAATTTTTTATCAACCCCTATTTGAGCCCACAAAA
TAACCCCACCATTGCGAAAAATAAAATATACCAGCTTTTTATCGGTCCACCAT
        Other Products of this Gene
        Other Transcripts
        Name
        FlyBase ID
        Length (nt)
        Prp39-RA
        FBtr0085323
        3563
        Prp39-RB
        FBtr0085322
        3405
        Prp39-RE
        FBtr0113299
        3582
        Prp39-RH
        FBtr0113301
        4604
        Polypeptides
        Derived from THIS transcript
        Name
        FlyBase ID
        Length (aa)
        Prp39-PC
        FBpp0084694
        1009
        Derived from OTHER transcripts
        Name
        FlyBase ID
        Length (aa)
        Prp39-PA
        FBpp0084692
        1009
        Prp39-PB
        FBpp0084691
        1066
        Prp39-PE
        FBpp0112211
        1009
        Prp39-PH
        FBpp0112213
        501
        Comments

        Transcript terminates at site supported by polyadenylated cDNA.

        External Crossreferences and Linkouts ( 1 )
        Crossreferences
        RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
        Synonyms and Secondary IDs (2)
        Reported As
        Symbol Synonym
        CG1646-RC
        (FlyBase, 1996-)
        Prp39-RC
        Secondary FlyBase IDs
          References (2)