FB2026_02 , released June 18, 2026
Transcript: Dmel\Spn42Da-RE
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General Information
Symbol
Dmel\Spn42Da-RE
Species
D. melanogaster
Annotation Symbol
CG9453-RE
FlyBase ID
FBtr0086199
Feature type
mRNA
Associated gene
Dmel\Spn42Da
Evidence Rank
Length (nt)
1643
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 18 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        Contained within the annotated transcript, internally consistent
        End(s) extend beyond the annotated transcript, internally consistent
          Sequence
          Sequence Downloader
          GGCCAGTCTATTACGTACGCTTTGCAGACTAGGTTTACTGTAAGCAAAATTACTGAGTATGGATTATCGTTTGGTGCCAT
GTGGTTGCTGGTTGCTCCCCCTGCTCGGCCTAGCCCTCTTCCCGTTTCCACCGGTCCACACGGCTGACGTCACCATGGCT
GACGCCGCCCACCAGGAGTTCGCCCGCCGGCTGGCCCTTTTCTCTATCAACGTGTACGGCAAGCTGTCGGGGCAGAAGCC
CGGCGAGAACATCGTCTTCTCGCCCTTTTCCATCCAGACTTGTGCGGCGATGGCCAGGCTGGGTGCAGAAAACGAGACGG
CTACCCAGCTGGACCAGGGACTGGGCTTGGCCTCTAGTGACCCAGAGCAAATCGCACACAGTTTTCACCAGGTGCTGGCC
GCCTACCAGGACAGTCAGATCTTGCGCATCGCCAACAAGATTTTCGTCATGGATGGCTACCAGCTGCGCCAGGAGTTTGA
TCAGCTGTTATCCAAGCAGTTCCTCTCGGCGGCTCAGAGCGTGGACTTTTCCAAAAATGTACAAGCAGCGGCCACCATCA
ACAATTGGGTTGAGCAGCGCACCAACCATCTGATCAAGGACCTTGTGCCGGCTGATGTATTGAACTCCGAATCGCGACTC
GTCCTTGTGAACGCCATTCACTTCAAGGGCACCTGGCAGCACCAGTTCGCCAAACACTTAACCCGCCCAGACACCTTTCA
CCTGGATGGGGAGCGAACAGTTCAGGTTCCGATGATGAGTTTAAAGGAGCGGTTCCGCTACGCCGATCTGCCGGCGCTAG
ATGCCATGGCTCTGGAACTGCCCTACAAGGACTCAGACCTCTCTATGCTGATCGTACTGCCCAACACCAAGACGGGTCTG
CCCGCTCTGGAGGAGAAGTTGCGCCTCACGACCCTCTCGCAGATCACGCAGTCGTTGTACGAAACAAAGGTAGCGCTCAA
ATTGCCCAGGTTCAAGGCAGAGTTCCAAGTGGAATTGTCTGAGGTTTTCCAGAAGCTGGGCATGTCAAGGATGTTCTCCG
ATCAGGCTGAATTTGGAAAAATGCTACAAAGTCCGGAGCCATTGAAAGTGTCAGCCATCATACACAAGGCCTTCATTGAA
GTCAACGAGGAGGGAACGGAGGCTGCGGCCGCCACGGGAATGGTCATGTGCTACGCCTCCATGCTCACGTTCGAACCGCA
GCCCGTCCAATTCCATGTCCAGCATCCATTTAACTATTACATTATCAATAAGGATTCTACTATTTTGTTTGCGGGAAGAA
TCAATAAGTTTTGAAGTTAGCACTCCATCAAAATCCACCAATCACAACCATTGAACTGAAATGCAATGTAATCCCAATTC
ACAGGACTCAACCGCTCTCTTCGCTGGCAGCATAAAGAAACTCTAAATAGGCAAACATACTAACCAATCCACAATGTTAC
TCGAGGGTCTCGTATTCATTTAACGTGCAAGCGGGTCAGTCCTATATTGCTGGCTTGACGAGCATATTCAGCTTTTACAT
TGTCTATAAGGATTCACAAAATTATAGTCTGTGCGCAATTGATGATCTTATATATACACTTAATATTTTTATACTAACCA
AGCATGTAGCCGTAGCCTCAATAAAGTCTAAAAGCAAATGTCT
          Other Products of this Gene
          Other Transcripts
          Name
          FlyBase ID
          Length (nt)
          Spn42Da-RA
          FBtr0086197
          1505
          Spn42Da-RB
          FBtr0086196
          1385
          Spn42Da-RD
          FBtr0086198
          1531
          Spn42Da-RF
          FBtr0086200
          1669
          Spn42Da-RG
          FBtr0086201
          1651
          Spn42Da-RH
          FBtr0086202
          1763
          Spn42Da-RI
          FBtr0086203
          1370
          Spn42Da-RJ
          FBtr0086204
          1490
          Spn42Da-RK
          FBtr0086205
          1789
          Spn42Da-RL
          FBtr0300336
          2155
          Polypeptides
          Derived from THIS transcript
          Name
          FlyBase ID
          Length (aa)
          Spn42Da-PE
          FBpp0089190
          411
          Derived from OTHER transcripts
          Name
          FlyBase ID
          Length (aa)
          Spn42Da-PA
          FBpp0085524
          392
          Spn42Da-PB
          FBpp0085523
          424
          Spn42Da-PD
          FBpp0089189
          411
          Spn42Da-PF
          FBpp0089191
          411
          Spn42Da-PG
          FBpp0089192
          379
          Spn42Da-PH
          FBpp0089193
          379
          Spn42Da-PI
          FBpp0089207
          406
          Spn42Da-PJ
          FBpp0089208
          374
          Spn42Da-PK
          FBpp0089206
          379
          Spn42Da-PL
          FBpp0289565
          379
          Comments

          Encodes protein variant B (FBrf0151323).

          Transcript terminates at site supported by polyadenylated cDNA.

          External Crossreferences and Linkouts ( 1 )
          Crossreferences
          RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
          Synonyms and Secondary IDs (3)
          Reported As
          Symbol Synonym
          CG9453-RE
          (FlyBase, 1996-)
          Spn4-RE
          (FlyBase, 1996-)
          Spn42Da-RE
          Secondary FlyBase IDs
            References (2)