FB2026_01 , released March 12, 2026
FB2026_01 , released March 12, 2026
Transcript: Dmel\Pkc53E-RA
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General Information
Symbol
Dmel\Pkc53E-RA
Species
D. melanogaster
Annotation Symbol
CG6622-RA
FlyBase ID
FBtr0087049
Feature type
mRNA
Associated gene
Dmel\Pkc53E
Evidence Rank
Length (nt)
3175
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 7 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        Contained within the annotated transcript, internally consistent
        End(s) extend beyond the annotated transcript, internally consistent
          Sequence
          Sequence Downloader
          GAATTCTAATAATACCCCTCGGGATAATAACGAAAAAGCAGTCATAGCCATTATGGCCATTAAGCACAAAAAAGTGACAT
GAAAACGTGAAGGGAAATGTGTTCCACAAATGGAGAAGAAGAAAAAAACGCGCTAACGCAAGTCGTTCGGAAATGATAGT
AACTGTTGCATTTCGCTCACAAAGACTATGATAGTTTTGCTAACACAGAGTTTCAGTCGAGTCCTGAATTGTCCTTTTTG
TGGTTTAGTTTGCGGTTGCAATCAATGCTGAATATGTTGTATGCAGGGTAGCAATAGAGTTGTACTTACTGCTGATTAGA
TAATTAAATGTACATCTTGGATAGATGAAAATGTTCTTGCTTTAAAATGTTTCAATTAGTTCATTGATTGAGTTGAACCA
ATTATTTTGCAATTAGCCAACATTTCTTGATATAATTAAAGCTTAAATTGGGACTAAATTGACTAAGGATTTATTTATTT
TAAAATTCTCAGAGTGTTATCATGTTATAGCTGAATTAAATCAAATTATTTGAGTGTTTGCATTAGTAAGCCACCGAGCC
GACTGCTTATGTTTACAGGGTATGGCACCATCGTATCCCAAGTGGGCCCACCTGCACAGATGGCATTTAATGTCTAATAA
AAACACGCCGACAACAAAAACTGAAAATCAATAAACACAAAGCCAGCAAAAAGTACGTAACCAGCAACAACAACACCAAC
AACAACACCCAAATGCGGCAACAACAAGTGAGCAAGTTAAAGAACCTTTGCGATTTGTAAACGCTGCGAAATACCCGTTG
TGCAGAAAAAAAAAACACCAACAAATAAACAAAAAAGCAACAAGAAGAAAAAAAAAGCAAAAAAAAGAACATTTAGCAAC
AATGTCGGAGGGCAGCGATAACAACGGGGATCCCCAGCAGCAGGGGGCGGAGGGGGAGGCGGTGGGCGAGAACAAAATGA
AGTCCCGCCTCCGCAAAGGAGCCCTCAAGAAGAAGAACGTCTTCAATGTCAAGGATCACTGCTTCATCGCCCGGTTCTTC
AAGCAGCCCACGTTCTGCTCCCACTGCAAGGACTTTATCTGGGGCTTCGGAAAGCAAGGATTTCAGTGCCAAGTTTGCTC
CTATGTGGTGCACAAGCGGTGCCACGAATATGTCACCTTCATCTGCCCGGGCAAGGATAAGGGCATCGATTCGGACTCAC
CAAAAACTCAACACAATTTCGAGCCATTCACATACGCAGGACCCACGTTCTGCGATCATTGTGGGTCCCTGCTGTATGGC
ATTTACCACCAGGGTCTCAAATGCTCAGCATGTGACATGAACGTGCATGCCCGCTGCAAGGAGAACGTGCCCAGCCTTTG
CGGATGCGATCACACGGAGCGGCGGGGTCGCATTTATCTGGAGATCAATGTCAAGGAGAATCTGCTAACTGTCCAGATCA
AGGAGGGTCGCAATCTCATACCCATGGACCCAAACGGACTGAGCGATCCCTATGTGAAGGTGAAGCTAATTCCAGATGAC
AAGGATCAATCCAAGAAGAAGACTCGCACCATTAAGGCTTGCCTAAATCCTGTCTGGAATGAGACACTCACTTATGATCT
AAAGCCCGAAGACAAGGATCGACGCATCCTGATCGAAGTGTGGGACTGGGATCGCACTTCACGCAATGACTTTATGGGTG
CTTTGTCCTTCGGAATCTCAGAGATCATCAAGAACCCAACCAATGGCTGGTTCAAACTGCTCACCCAGGACGAAGGCGAG
TACTACAATGTGCCATGTGCGGATGATGAGCAGGACCTACTGAAGCTCAAGCAGAAACCATCGCAAAAGAAGCCGATGGT
AATGCGCAGCGATACGAACACGCATACTTCTTCCAAAAAGGATATGATCCGGGCCACGGACTTTAATTTCATCAAAGTTC
TCGGCAAGGGCTCATTTGGAAAGGTTTTGCTGGCTGAGCGCAAAGGCAGCGAGGAGTTGTATGCCATTAAGATACTCAAA
AAGGATGTGATCATTCAGGACGACGACGTCGAGTGCACCATGATCGAAAAGCGTGTCCTGGCGCTGGGCGAAAAGCCACC
TTTCCTGGTCCAATTACACTCCTGCTTTCAGACGATGGACCGTTTGTTCTTTGTAATGGAGTATGTGAATGGCGGCGATT
TGATGTTCCAAATCCAACAGTTTGGCAAGTTTAAGGAACCAGTGGCCGTATTTTATGCCGCTGAAATAGCAGCAGGTCTT
TTCTTCCTTCATACCAAGGGCATACTGTATCGAGATCTAAAGCTGGATAATGTGCTCCTAGACGCCGATGGACATGTGAA
GATTGCGGACTTTGGCATGTGCAAGGAGAACATAGTGGGTGATAAGACCACAAAGACTTTCTGCGGTACACCTGATTACA
TTGCTCCAGAGATAATACTGTATCAGCCCTATGGCAAATCGGTGGACTGGTGGGCCTATGGAGTACTGCTTTATGAGATG
TTAGTGGGCCAGCCACCTTTCGATGGCGAAGATGAGGAGGAGCTGTTTGCCGCCATAACTGATCATAATGTGTCCTATCC
AAAGAGCCTGAGCAAAGAGGCCAAAGAGGCCTGCAAGGGCTTCCTAACTAAGCAGCCAAATAAGCGTTTGGGTTGTGGTT
CCTCTGGCGAGGAGGATGTGCGTCTGCATCCCTTTTTCAGACGCATCGATTGGGAGAAAATCGAAAATCGCGAAGTGCAA
CCGCCATTTAAGCCGAAAATTAAACACCGCAAGGATGTGTCCAACTTTGACAAGCAGTTCACATCAGAGAAAACAGACTT
GACGCCCACGGACAAGGTGTTTATGATGAATCTGGATCAGTCGGAATTCGTTGGCTTCTCCTACATGAATCCCGAATATG
TTTTCAGCCCATAGATCCGATCTGATCCGATCTAATTTCCATTCTTCGCGTTGTGTCCCCTAAGTCTATTTTGATATTGA
TTACTAAAAAGACATCTTGTTAATCTTTGTTAAGTTTTCTGTTTGATTTTCAACCATTATATGTATCTATATTTATTGAA
TTGTTAAGTTTTTAGTTAATTTTAAGATCTAGAAACTGTGAAACAGAGCTTTAGTTATGGAATATTCGAATACTGTTCAA
AGGCACGTCCTTACCTCAAGCCAACAAAAAAAGCAATAAAAGCAACATGTCAAAT
          Other Products of this Gene
          Other Transcripts
          Name
          FlyBase ID
          Length (nt)
          Pkc53E-RB
          FBtr0087048
          2696
          Pkc53E-RC
          FBtr0112819
          2693
          Pkc53E-RD
          FBtr0305069
          2024
          Pkc53E-RE
          FBtr0305070
          2633
          Pkc53E-RF
          FBtr0331960
          4711
          Polypeptides
          Derived from THIS transcript
          Name
          FlyBase ID
          Length (aa)
          Pkc53E-PA
          FBpp0086198
          670
          Derived from OTHER transcripts
          Name
          FlyBase ID
          Length (aa)
          Pkc53E-PB
          FBpp0086197
          679
          Pkc53E-PC
          FBpp0111731
          678
          Pkc53E-PD
          FBpp0293606
          525
          Pkc53E-PE
          FBpp0293607
          678
          Pkc53E-PF
          FBpp0304291
          670
          Comments

          Transcript terminates at site supported by polyadenylated cDNA.

          External Crossreferences and Linkouts ( 1 )
          Crossreferences
          RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
          Synonyms and Secondary IDs (1)
          Reported As
          Symbol Synonym
          Pkc53E-RA
          (FlyBase, 1996-)
          Secondary FlyBase IDs
            References (2)