FB2026_02 , released June 18, 2026
Transcript: Dmel\CAP-RF
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General Information
Symbol
Dmel\CAP-RF
Species
D. melanogaster
Annotation Symbol
CG18408-RF
FlyBase ID
FBtr0088342
Feature type
mRNA
Associated gene
Dmel\CAP
Evidence Rank
Length (nt)
3510
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 41 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        Contained within the annotated transcript, internally consistent
        End(s) extend beyond the annotated transcript, internally consistent
        Sequence
        Sequence Downloader
        CGTAGTCGTCGTCGTGTTAAAGTCGTGTGAGCAACGCGAAGGCGCGTCAGAAAACAGAAAATAGAAAATATAGAAAAGTC
CGAAGTCGGAAATTGAAATTCAAAAAAGAAGTCGCTTCTATATTTCCACAGCACAAATGGGGCAGGGTTAGTTGAGTGTT
TCGTGTTTTCGAATTTGTTTGTGTGCCGCGCAAACGTTTTGCCACTTCCTCAGTATCGAAAATTATCAAAAAGATACCAA
GATGCACGAGCTGCACACGAAGTGAAGTGCTTGAAGTGAAAGAGTATCCCGATCTAAATCGCCGTTCTGGCCATTTGCAA
TTTGATTTTTGCAGAGCACACACAAAGCACGACGGGCACCGCGATGTTTGCACCCAAATTCAAGGCGCGCGCGCCACCAG
GCTCAGGCGTGTGGACACCTTACGGTTCCAGCGGCGATCTAAATCAATCGGGCGCCACCTCGGCCACGCCACCGCCCCCG
CCGCCACCCTCGCTGCCCGTTTGGACACCCCAGCCATCGCCGGTGTTGAGCGGACGCAAGGAGTTCCGTCCGGTCCGCTT
CGAGTCCCCCACTCTGCCCCGTCGCTATACGGCGCAGCAGCAACAGAAGACGACGACTACGATCCCGCCGTGGTCCAGTG
CGGAGAACGGAGAAGGTGGCCCACCTCCCACCGCACCAGCCTCCCTCAACTCCGTGAACTCCAACTCGGACTACGCCGAA
ACCGACTGCTCCGGACACTTTGGTCCCGTGGCGCCCAGTGCCAGTGTCTCCGACAAGATCAGAACATTCGAACGCTCTTC
GTCCAACTCGGAGCTGCAGAGGCCGTTTGTGCGGCGCCAGCTGTCCGACGCCAGTCGTCCAGCCTACAGGCCCAATGAAG
TCATCTACAAAGTCAAGCACGAGTATATGAGCGAACCGGAGACGGGCAGCGATCGTCCCCGGAAAATGGCACAGTTAGGG
CGAAGGCAGTACGACGGCATCGGTCCGGTGACCAACGATGGAATGCCCATCATCCTGAGATCGGAGGTCAAGGAGCCGCA
TCAGCATGAGTGGTACAAGCGTCTGTATCAGACGATACACAAGCAGAAGAACGGCGATGATTTCGTGATTCGCTACAAGT
GTCCTAGAGCCCGTCCGTCGTACAAGAGCAACGGATACGTCTCAGAGCCCGAGCCCAACTACGATTCGGATTACTCGACG
GTGAGGTACCGCACCCAGAATCCGCACCGCGTTCAGTCCGTCTCCTCGGCTGTCAATGTGCGCAACCTTAATCAGGACGA
GAAGTTGTATGGTACTATGCCAAATCCCATAAAATCAGCGCAAAACTCGTATAAGAATCAGCCAGGTCGCATCGAAAACT
ATACGACAGGTCATTCGTCTGTTTCCGAAAAGGAAAAGAAGGAGTGGTGGGACGAAGTGATGGACATCTTTAACGGGAAT
CTAGAACAATCGAAACTATCGCCATTGTACACTGAAGGTAACTTGTCCAGAGCTTTGGCCAAGGAATCCGGCTATACTAG
CGATTCCAATCTGGTCTTCCGTAAGAAGGAGGTACCCGTGAGCAGTCCCCTTAGCCCCGTTGAACAAAAGCAGGCTTACA
AGAGTCTCCAGGCAGGGGGAGAGCCACCTCTGCTCGGCTTCCGTAAACCAGCGCCCGAGAAACCCCGTGATCTCGACCCG
AACGCGCCCCCCATTCCCCCACAGCCACCAGTCAAGGGTCTCTCCTCCTACGATTTCCCGTACAGCACCGACACCGTCGA
CGGATCAGACGTGAACATCCACTTCAAGACCCCCATCAGGCATGAGCAGCGTCAGAACTTGTCGGAAGAGGAACTAGCCA
TTCGCCAAGCGGAGCACATGCAGAAGCTCTACCACGAGGAGCGCCGTCGCAAGTATCTACAGGAGCTGCAGGACATGAAT
TCGCGCCGCCACACGGACAACTTCACCCCGTCGCAGAAGTCGCCCATCGCCCTCAATCGCTACGATGACTTCCCCACGGA
CGTGACCCTCAAGTCGCTGGTGGGCCCCAAGACGGTGGCCCGGGCTCTCTTTAACTTCCAGGGACAGACCTCGAAGGAGC
TATCCTTCCGCAAGGGCGACACAATCTACATCAGGCGGCAGATTGATGCCAACTGGTATGAGGGCGAGCACAATGCCATG
ATTGGACTGCTTCCAGCCAGCTATGTTGAGATTGTCAGTCGAGATGGAGCCCGTACCCCATCCAAACGGCCATCGGAGGG
TCAGGCCCGTGCCAAATACAACTTCCAGGCCCAGTCGGGCATTGAACTCTCCTTGAACAAGGGCGAATTGGTCACTTTGA
CACGCCGAGTGGATGGCAACTGGTTCGAGGGCAAGATTGCCAACAGGAAGGGCATCTTCCCGTGCTCCTACGTGGAGGTA
CTTACTGATATTGGTGCTGAGGACATTGCGGCCAGGACAACCACCGTGATCACCAGCCAGAGCACCACGAATCTGCGGCC
CAATCTCGACGTGCTGCGCACAAACATCAACAATGAGTTCAATACGCTGACGCAAAATGGAGCACAGCCACCGAACGGAA
TCCTCAAGGAAACGCGGACACTTCACAAGACGGACGCCCTCCATGTGGACACCAGTTCCGAACCATTGGCGTACCGCGCA
CTGTACAAGTACCGGCCCCAGAACTCCGACGAACTGGAACTGCTCGAGGGAGATGTGGTCCATGTGCTGGAGAAGTGCGA
CGACGGATGGTTCGTGGGCACCTCGCAGAGGACCGGCTGCTTCGGCACATTCCCCGGCAACTACGTGGAACGGGCCTAGA
GGAGATCGATCCAATGATCCAGCCCCCGGAGCGGCGATCGTGCCTAATCTTAATGAATTTGTAGTCTAATACGAGGAGGA
ATCAGCGTGGCCGGGGCAAAGGCAGTTCTATGATTAACTCTGATTTGGTTTTACTGGATTATTTTATGTTGTTGTTGAAT
AATTCTTATCCCGCTAATTCTGCTGCTTTCGTTTTGCCGTATTTTAAAGCTATTTATTTATTTTTAAACAGAGCATTAAT
TTTATCAATGTTGGAATTACGTTTATTTATGACATCCAAATATTAACCAAAAGTTGTCCCCTCCACCTCCCCCACTCCAA
CACACACACACACCAAATATCGAAGGACCTTAATTAAGATCATACATACATACATATGTACTTTGTCGTTTACCTACTAA
TTTTAACTAGTCACAGCTAATTTCCAAAAAGAATATCAATTGCGAAAAAAAGAAGAGACCGTTGAACTAAAGTGCCTTAA
AGTTGAAATTTAAATGACTAAAACGATATAAAATGTTTCAAAGTGCTAAGATTCAAGTGCCCTTGTTGAGTCGGCAGAGT
GGATAATTACTATTGATAATTATGAATATTATTTATGATATTGTCGTGTCCGAACCAACAGAAACCATTTTAAAAAATCT
ATACAAAAATCGTTTATTACACAGACACTGTTGCAAGCGTAATTAGTAAATAAAGAAGAAACTAAAAAAC
        Other Products of this Gene
        Other Transcripts
        Name
        FlyBase ID
        Length (nt)
        CAP-RA
        FBtr0088341
        8447
        CAP-RAA
        FBtr0479877
        3579
        CAP-RAB
        FBtr0479878
        8885
        CAP-RAC
        FBtr0479879
        9023
        CAP-RAD
        FBtr0479880
        5858
        CAP-RAE
        FBtr0479881
        8876
        CAP-RB
        FBtr0088344
        6205
        CAP-RC
        FBtr0088343
        3322
        CAP-RD
        FBtr0088345
        2376
        CAP-RE
        FBtr0088346
        1788
        CAP-RG
        FBtr0088340
        3521
        CAP-RH
        FBtr0088339
        2578
        CAP-RI
        FBtr0088338
        2663
        CAP-RJ
        FBtr0088347
        2702
        CAP-RK
        FBtr0299825
        3301
        CAP-RL
        FBtr0299826
        8414
        CAP-RN
        FBtr0299828
        3157
        CAP-RO
        FBtr0299829
        2824
        CAP-RP
        FBtr0299830
        6531
        CAP-RQ
        FBtr0301131
        8555
        CAP-RR
        FBtr0301965
        6232
        CAP-RS
        FBtr0306688
        2384
        CAP-RU
        FBtr0306690
        2872
        CAP-RV
        FBtr0306691
        8693
        CAP-RW
        FBtr0336694
        5528
        CAP-RX
        FBtr0336695
        8834
        CAP-RY
        FBtr0336696
        8546
        Polypeptides
        Derived from THIS transcript
        Name
        FlyBase ID
        Length (aa)
        CAP-PF
        FBpp0087431
        811
        Derived from OTHER transcripts
        Name
        FlyBase ID
        Length (aa)
        CAP-PA
        FBpp0087430
        2376
        CAP-PAA
        FBpp0428210
        834
        CAP-PAB
        FBpp0428211
        2522
        CAP-PAC
        FBpp0428212
        2568
        CAP-PAD
        FBpp0428213
        1696
        CAP-PAE
        FBpp0428214
        2519
        CAP-PB
        FBpp0087433
        1734
        CAP-PC
        FBpp0087432
        824
        CAP-PD
        FBpp0087434
        527
        CAP-PE
        FBpp0087435
        313
        CAP-PG
        FBpp0087429
        500
        CAP-PH
        FBpp0087428
        500
        CAP-PI
        FBpp0087427
        639
        CAP-PJ
        FBpp0087436
        565
        CAP-PK
        FBpp0289103
        630
        CAP-PL
        FBpp0289104
        2365
        CAP-PN
        FBpp0289106
        313
        CAP-PO
        FBpp0289107
        630
        CAP-PP
        FBpp0289108
        1883
        CAP-PQ
        FBpp0290354
        2412
        CAP-PR
        FBpp0291177
        1743
        CAP-PS
        FBpp0297627
        554
        CAP-PU
        FBpp0297629
        674
        CAP-PV
        FBpp0297630
        2458
        CAP-PW
        FBpp0307675
        1586
        CAP-PX
        FBpp0307676
        2505
        CAP-PY
        FBpp0307677
        2409
        Comments

        Transcript terminates at site supported by polyadenylated cDNA.

        External Crossreferences and Linkouts ( 1 )
        Crossreferences
        RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
        Synonyms and Secondary IDs (5)
        Reported As
        Symbol Synonym
        CAP-RF
        (FlyBase, 1996-)
        CG18408-RF
        (FlyBase, 1996-)
        CG18409-RA
        rexin-RD
        rexin-RE
        Secondary FlyBase IDs
          References (2)