FB2026_02 , released June 18, 2026
Transcript: Dmel\ChAT-RA
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General Information
Symbol
Dmel\ChAT-RA
Species
D. melanogaster
Annotation Symbol
CG12345-RA
FlyBase ID
FBtr0089367
Feature type
mRNA
Associated gene
Dmel\ChAT
Evidence Rank
Length (nt)
4011
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 29 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        Contained within the annotated transcript, internally consistent
        End(s) extend beyond the annotated transcript, internally consistent
          Sequence
          Sequence Downloader
          TCGCCAGACAGAAGTTACCTTTGCTCCTGCCCGGACGACTGAACGCACGCTGCTGCTGTAACGCCGTAGTCGCCGTCCGT
CGCCTGGAAAAAGAACTCCCCGGAGCTACATTGTATAGCCAGGAATAGAAAAAAAAAAAAAATAAATAAAAGAAGTATCA
TTTTTTGTGGACAAGCTCAGCCAGGGAAATCCAAGCGAACGAGCGGTCGAGCGAAGCGGTTGCATTGCGGGTAGAGTGTC
AGTGTGTGTGTGTTTTGGCGTCGGTGTGAGCGTCTTGGCGATCGATTAGCGCGCGCTGCCCTTTTACATAATCGCAGCGA
GAAAAGTCCGCGCGCTTTCGTGTGCTATTTGCTTTTGGGTGATTTGGGCGATCATCCCAAGCGACAAAGAAAAAGGGGCC
AAACCAACCGGATCCGAAAGGAGCGAACGTGGCGTCCAACGAGGCCAGCACCAGCGCAGCGGGCAGTGGCCCGGAGTCCG
CCGCCCTGTTCTCCAAGTTGCGTAGCTTCTCCATTGGCAGCGGGCCGAACTCGCCGCAGCGCGTCGTCTCCAATCTCCGA
GGATTCCTCACCCATCGCCTCAGCAACATCACACCGAGCGATACAGGATGGAAAGACTCGATTCTGTCGATACCAAAGAA
ATGGCTCTCAACGGCCGAGTCTGTGGACGAGTTTGGATTCCCTGACACTCTACCCAAGGTGCCCGTTCCAGCACTGGATG
AAACGATGGCCGACTATATCCGCGCCCTGGAACCGATTACCACGCCGGCGCAGCTCGAGCGGACCAAGGAGCTGATCAGG
CAGTTCTCGGCTCCCCAGGGAATCGGAGCGCGGCTGCATCAGTATCTGCTGGACAAGCGTGAGGCGGAGGATAACTGGGC
CTATTACTACTGGCTCAACGAGATGTACATGGATATTCGCATCCCTTTGCCGATCAACTCGAATCCGGGCATGGTGTTCC
CGCCGCGTCGCTTCAAGACCGTCCACGACGTGGCCCACTTCGCCGCTCGCCTGCTGGACGGCATTCTGAGCCACCGCGAG
ATGCTGGACAGTGGGGAGCTGCCGCTGGAGCGGGCCGCCTCGCGGGAAAAGAATCAGCCGCTGTGCATGGCGCAGTACTA
CCGCCTGCTGGGCTCCTGTCGTCGGCCTGGTGTCAAGCAGGACTCGCAGTTCCTGCCGTCGCGGGAGCGACTGAACGACG
AGGATCGCCATGTGGTGGTTATTTGCCGCAACCAAATGTATTGCGTCGTGCTGCAGGCTAGCGATCGTGGAAAGTTGTCG
GAGAGTGAGATCGCCTCACAGATCCTCTATGTGCTCAGTGATGCTCCCTGTCTGCCAGCTAAACCAGTGCCGGTGGGTCT
GCTGACCGCTGAGCCGAGGAGCACGTGGGCACGGGACCGGGAAATGCTTCAGGAGGACGAACGCAATCAACGCAATCTGG
AGCTCATCGAGACGGCACAGGTGGTCCTCTGTCTGGACGAACCGCTGGCTGGGAACTTTAATGCGCGCGGTTTTACGGGT
GCCACGCCCACAGTTCATCGGGCGGGGGATCGGGACGAGACGAACATGGCCCATGAGATGATCCACGGCGGAGGCAGCGA
GTACAATTCCGGAAATCGCTGGTTTGACAAGACCATGCAGCTCATTATTTGCACCGATGGAACCTGGGGCCTTTGCTATG
AGCACTCCTGTTCCGAAGGCATTGCTGTTGTCCAGCTGCTGGAGAAGATCTACAAAAAAATCGAGGAGCACCCGGACGAG
GATAACGGTCTACCGCAACACCACTTGCCACCACCGGAGCGTCTGGAGTGGCATGTGGGTCCGCAATTGCAATTGCGCTT
TGCCCAAGCCTCCAAGAGTGTGGACAAATGCATCGATGACCTGGACTTCTATGTGTACCGCTACCAGAGTTACGGAAAGA
CCTTTATCAAATCGTGCCAGGTCAGTCCGGATGTGTACATTCAACTGGCCCTGCAACTGGCTCACTACAAGCTGTACGGA
CGTCTGGTGGCCACCTACGAAAGTGCGTCCACTCGACGATTTCTGCACGGTCGCGTAGACTGCATCAGAGCGGCCAGCAC
GGAGGCATTGGAGTGGGCCAAGGCCATGTGCCAGGGTGAGGGTGCAAACGTGCCCCTGGAGAGCGATCGCGAGGATGAGG
AGGAGTCGCGAAAGGTCAAGTTTAGCATTTACAGTAAGGATCATCTCCGGGAGCTTTTCCGGTGCGCCGTCGCCCGCCAG
ACTGAGGTGATGGTGAAGAACATCCTGGGCAATGGCATCGACATCCCGCTGCTGGGCCTGCGAGAGGCCAGTATAGAGGT
CACCGGCGAGATGCACGAGCTGTTCAAAGACGAGTCCTACATCATCTCGCAGTGCTTCCTGCTCTCCACCAGTCAGGTGG
CCTGCTCTACGGACAGCTTCATGGGATACGGACCGGTAACGCCACGTGGTTATGGCTGCTCCTACAATCCGCATCCGGAA
CAGATCGTCTTCTGCGTCTCGGCCTTCTACTCCTGTGAGGATACGAGTGCCTCGCGCTACGCCAAATCGCTGCAGGACTC
GCTGGACATAATGCGTGATCTACTGCAAAACTAGACGAACTAGACTAGAATGTCGCTAGGATTGGGGTCCACCAGAAAAA
AAAAAAACATATCAGTTAATGTACCTAAGCAGGTTAGCGAACGAAAGTAAGTAAGTGTAACTAGCGACCACACACGGGCG
TTTCATTTGTGACCAAGCACCACCAAGCGAGCCACCCAACGAGGGGTGGGCATCTGAGGAATAAGATGGATAACGATAAC
GAAATCGGAATCGAAAACTGATGTCAATCACTATCAAGTTGAGACAAAAAAAAAAACACAAAAAAAAAGAAATAAGAAAA
CTATACGCAACCCATTCGCTTTACATATCCGTTACCAAAGTATCCTCGTAGTTTGAATTAGAGCAACTCTAGTCAATTAA
ATGTTTTAGAGCCGTTTTATGCGCAAATTGTTAGTGCTGTTATCTAAGTGTGTTAATTGTGCTATATTAAATATGAGTGT
TATACCAATCACTAACTAACTTAGCAGAGCTTACGAACTTGTTTATACCCCTACTGTCAGCGAATTATGGCAAGCAAGCC
CACAAGTATGCAATACTTTTCGTTACGAAAGTTGTGTTTCAAATACAATACGTTCTATAGTTGTTACAAAAGATACTAGC
TAAAGCATATACTAAAAGTACTATCTGCGCTTGTTACTGCAATTTCGTTGTTTGTTTGAGGACTTATTACAAAAAAAGAA
TTATATAATGTCTGTTAATATATTTCCATATATATTCGTGTTTTAGAGAGCAAATGGTATACCGTAACTAAAGGCTTTTT
GGATGAATATATATATATATATATATATATAATAATATATGTATGTACAACCCGTAAATGAATAATGAAATGAATGTAGA
GGAATATATAGAATACGCGTATAGACTTGAGACGTAACAATACATATCAATAAATTTATATACATCCCAGGAAGGCAAAT
GATGCCCCACGGCGCAGGACGATTTAGAATGATATAGATACATATATAACCTATGTGTGTTTGTTTGTCTGTTCGAGCCG
TTAGCAAAAAAAAAAGATGTTTCGATGGCGATCCACCAAAGCTGTCAATAATCTGCAAAGAATATATTATATACATAAAT
ACTATACGTATGTTATTTACAATGGAAAATATATGAGAAACGTTAAAGGACAACCAGATACTTATATCAAACTAGTTGCT
GTGTTCATTGTTGCTATATATGTACTATATGTATGATTATCTTCTAAACTGTTAACCGAACTATCACTACGTACTATCCA
ACTAACTATCTATCTTACCTGTATTATTCGATCTGTGTATCAATCATTACGTTACCATACTGTTCTGTACTGTCGTTAAG
TTTGACTCGTTTCCATATGGCCAAGAGCCGCAATTAATGTATGCATAAATAATCACGAACCGAATAAATTGAAATAAATG
CATTACAAACC
          Other Products of this Gene
          Other Transcripts
          Name
          FlyBase ID
          Length (nt)
          ChAT-RB
          FBtr0089368
          2824
          Polypeptides
          Derived from THIS transcript
          Name
          FlyBase ID
          Length (aa)
          ChAT-PA
          FBpp0088397
          721
          Derived from OTHER transcripts
          Name
          FlyBase ID
          Length (aa)
          ChAT-PB
          FBpp0088977
          714
          Comments

          Unconventional translation start postulated (GUG encoding Met); FBrf0052176.

          Transcript terminates at site supported by polyadenylated cDNA.

          translation_exception: non_canonical_start_codon

          External Crossreferences and Linkouts ( 1 )
          Crossreferences
          RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
          Synonyms and Secondary IDs (3)
          Reported As
          Symbol Synonym
          CG12345-RA
          ChAT-RA
          Cha-RA
          (FlyBase, 1996-)
          Secondary FlyBase IDs
            References (2)