FB2026_03 , released September 17, 2026
Transcript: Dmel\dj-RA
Open Close
General Information
Symbol
Dmel\dj-RA
Species
D. melanogaster
Annotation Symbol
CG1980-RA
FlyBase ID
FBtr0089742
Feature type
mRNA
Associated gene
Dmel\dj
Evidence Rank
Length (nt)
1152
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 3 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        Contained within the annotated transcript, internally consistent
        End(s) extend beyond the annotated transcript, internally consistent
          Sequence
          Sequence Downloader
          CCACAGACAAATAGTCTCCAGCTGTGGTTTTTTCAAAATTCTTTGTAAAACTTTTGGTACAAAATTTAAAAATTTTTCTC
GAAATGTTTAAGAGAACCGCTTTAATTTTACGTCGGTGCTTTCAGCCCACTTTTATACGGCCTCACCACATCAATGTCCT
TGAGAACTTTAAGGAAGCCGATGACCTTCCCAATCAGGGGCAAGCAAAATTTGTCGATGTCTCTATTCACGATCCGCAAC
ACATTCGTTCTGCACTCGTCAGTCCAATGCAACGAAAGTTCTTGCAAGACCTGGAGCAGCAACAGACTGTTAGGATCAAG
TGGTTTAAGGAAGGGAATCAGGATGAACTTGAAAACATGAAAAATGAATGCCGGAGGCTAGCTCTAGAAATCATCATGGC
TGCTAAAGGTGGCGACATCAAAAAAGCCTGCAAGGAACTGGCTGAAAAAGAAAAGTGCAAGCAGATAGAACTGAAAAAGA
AATGCAAGGAATTGGAGAAGAAGACGAAGTGCGCGAAGAAAGACCCTTGCAAAAAGAAAGATCCTTGCAAAAAGAAAGAT
CCCTGCAAAAAGAAAGATCCTTGCAAAAAGAAAGATCCTTGCAAAAAGAAAGATCCCTGCAAAAAGAAAGATCCTTGCAA
AAAGAAAGATCCGTGCAAAAAAAAGGGTGGGGACCTAAAAAAGAAGTGCAAAAAATTGGCCGAAAAGGAAAAGTGCAAAA
AACTGGCCAAAAAAGAAAAAATGAAAAAGTTGCAGAAAAAGTGCAAAAAAATGGCTCAGAAGGAAAAATGCAAGAAAATG
GCTAAAAAAGACAAATGCAAGAAAAAGTGAAGCTTTCGCGGATTATTCAATGAAATACATACGTACCTGGTTTAATTCAT
TCAGCTCTGTTCAACGCGGCTTTATCTAAAATATGGTTTTTTCATAATATACAATACGGCATTTTACCGAAAAATTAGAT
TTTATTTATTTAAAAAAATAACAAGGGGGAAAACAGTTAATGAGCATGTAACCCCCAGCTTTCGAGTAATGAGTCCGTGG
CAAGATTTCGTCGTTCATACGGACAGACTGATAGTCAGACGGTCATGTTTGTTAAGGAATCTATCTATATATATATATAT
AGATTTATATATCATATAAATAAATATGATTT
          Other Products of this Gene
          Other Transcripts
          Name
          FlyBase ID
          Length (nt)
          dj-RB
          FBtr0089741
          1132
          dj-RC
          FBtr0305962
          1209
          Polypeptides
          Derived from THIS transcript
          Name
          FlyBase ID
          Length (aa)
          dj-PA
          FBpp0088683
          248
          Derived from OTHER transcripts
          Name
          FlyBase ID
          Length (aa)
          dj-PB
          FBpp0088682
          218
          dj-PC
          FBpp0297104
          187
          Comments

          Unconventional splice site postulated (GT-AA): supported by RNA-Seq data.

          Annotation of Isoform A is based on O01352; U90537.

          Transcript terminates at site supported by polyadenylated cDNA.

          transcript_exception: non_canonical_splice_site

          External Crossreferences and Linkouts ( 1 )
          Crossreferences
          RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
          Synonyms and Secondary IDs (4)
          Reported As
          Symbol Synonym
          CG1980-RA
          Isoform A
          dj-RA
          (FlyBase, 1996-)
          dj-RB
          Secondary FlyBase IDs
            References (2)