FB2026_01 , released March 12, 2026
FB2026_01 , released March 12, 2026
Transcript: Dmel\Clk-RF
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General Information
Symbol
Dmel\Clk-RF
Species
D. melanogaster
Annotation Symbol
CG7391-RF
FlyBase ID
FBtr0100134
Feature type
mRNA
Associated gene
Dmel\Clk
Evidence Rank
Length (nt)
3695
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 9 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
      cDNA Clones, End Sequence Only (ESTs)
      Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        Sequence
        Sequence Downloader
        GGAATGCTTGCACATATCGCGTATACGCCCCGGCCGGCAAAAGGCATTACAACAGACTTGTAGACCGACTGACTCTCCCG
ACCGATTCGGTTTCGTATCTTTGTATCGTTATTCAAAATGTGGCATATTGAGCATATGGAAATCAATTGTTGCGTGAACA
TTACCTGAACTTTAAACCAAAGACAAGAGCACATATGAACAAAATTATGTGAGCGTGTAACTAATTTGTGGCATTTGTGA
GCAAATCTTCAAAAGAAGTGGAAGTTTCGAACTTTCTTCGGTTCTTCTCGTTTGCCCCTTTTCCCATTTTTTTTTCGGCA
TTTGTTTAAAAATTGTGCGCCTTGTAGTGGACTATCCTACAGACCCGAAAATGGACGACGAGAGCGACGACAAGGATGAT
ACAAAAAGCTTCCTTTGCAGGAAATCGCGTAATCTCAGCGAGAAGAAGCGACGAGATCAGTTCAACTCGCTGGTCAACGA
TCTCAGCGCCTTGATATCCACATCCAGCAGAAAGATGGATAAGTCCACGGTCCTGAAGTCCACGATAGCCTTCCTGAAAA
ATCATAATGGCCACCGATCGCTCCAAGGTTTTCGAAATACAACAGGACTGGAAGCCTGCGTTCCTCAGCAATGACGAATA
CACTCACCTCATGCTGGAGTCTCTCGATGGTTTTATGATGGTCTTCAGCAGCATGGGCTCCATCTTTTACGCCTCGGAAA
GTATTACCTCCCAGCTGGGCTATCTGCCGCAAGATTTGTACAACATGACCATTTATGACCTGGCCTATGAGATGGACCAT
GAGGCGCTGCTGAATATCTTTATGAATCCCACACCGGTAATCGAGCCCAGACAGACGGACATAAGTTCCAGTAACCAGAT
CACATTCTACACTCATTTGAGACGCGGCGGGATGGAGAAAGTGGATGCCAATGCCTACGAGTTGGTCAAATTCGTGGGCT
ACTTTCGTAACGATACCAATACTTCGACGGGTTCCAGTTCGGAGGTTTCGAATGGCTCAAATGGACAACCTGCGGTGCTG
CCGCGCATCTTCCAGCAGAATCCCAATGCCGAGGTGGACAAAAAGCTGGTTTTCGTGGGCACTGGACGCGTACAGAATCC
CCAACTGATCAGGGAAATGAGCATTATTGATCCCACAAGTAATGAGTTCACTTCGAAACACAGCATGGAGTGGAAGTTTT
TGTTTCTGGATCACCGTGCTCCTCCGATCATTGGCTATATGCCCTTCGAGGTTCTGGGGACGTCCGGCTATGATTATTAC
CACTTTGATGATCTGGACAGTATTGTGGCGTGCCATGAAGAGCTAAGGCAAACGGGTGAGGGCAAGTCTTGCTACTACCG
ATTCCTTACGAAGGGCCAACAGTGGATATGGTTGCAAACGGACTACTATGTGAGCTATCACCAGTTCAATTCCAAACCAG
ACTACGTGGTCTGCACCCATAAGGTTGTCAGCTATGCCGAGGTTCTGAAGGATAGTCGAAAGGAGGGCCAAAAATCGGGA
AATAGCAACAGCATCACCAACAATGGGAGCAGTAAGGTCATAGCCTCCACGGGAACTAGCAGCAAATCCGCATCTGCCAC
CACAACACTGAGGGACTTCGAGCTGAGCAGCCAAAATCTGGATAGCACATTGCTCGGAAATAGTCTGGCCAGTTTGGGCA
CTGAAACAGCAGCCACTTCACCCGCCGTGGACTCGTCGCCCATGTGGTCAGCGTCGGCTGTCCAACCGTCGGGATCATGC
CAAATAAATCCCCTGAAGACATCGCGTCCCGCTTCGAGTTATGGCAATATCAGCTCCACAGGAATATCGCCGAAGGCCAA
ACGAAAGTGCTACTTCTACAACAACCGGGGGAATGACTCGGATTCAACGTCCATGTCGACGGATTCGGTCACCAGCCGGC
AGTCCATGATGACGCACGTCAGTTCGCAAAGCCAACGGCAGCGATCGCATCACCGAGAACACCATCGAGAAAATCATCAC
AATCAGTCACATCATCACATGCAGCAACAGCAGCAGCATCAGAACCAGCAGCAGCAACATCAGCAGCACCAGCAACTGCA
ACAGCAGCTGCAACATACAGTGGGTACTCCGAAAATGGTGCCTCTCCTGCCGATTGCGTCCACACAAATAATGGCTGGAA
ATGCGTGTCAGTTTCCCCAACCCGCCTATCCGCTTGCTAGTCCCCAACTGGTGGCACCGACATTTCTTGAGCCGCCGCAA
TATCTCACCGCCATTCCCATGCAGCCAGTGATCGCTCCGTTTCCGGTGGCGCCAGTGCTTTCCCCACTTCCGGTGCAGTC
ACAAACGGATATGCTGCCCGATACGGTGGTTATGACGCCAACACAGAGTCAGTTGCAGGATCAATTGCAGCGGAAGCACG
ACGAACTGCAAAAACTGATCCTCCAGCAACAGAATGAGCTGAGGATCGTATCAGAGCAGCTCCTCCTATCCCGCTACACA
TATCTGCAGCCCATGATGTCGATGGGATTCGCACCTGGCAACATGACAGCAGCAGCGGTGGGTAATTTGGGAGCCAGTGG
CCAACGTGGACTGAATTTCACCGGCAGCAATGCCGTGCAGCCGCAATTCAATCAGTATGGATTTGCACTGAACTCGGAGC
AGATGCTTAACCAGCAGGATCAGCAGATGATGATGCAGCAGCAGCAGAATCTGCACACGCAGCACCAGCACAATCTCCAG
CAGCAACATCAGAGCCACTCACAGTTGCAGCAACATACCCAGCAGCAACATCAGCAGCAGCAGCAACAACAGCAACAACA
GCAGCAACAGCAGCAGCAGCAACAGCAACAACAGCAGCAGCAACAACAGCAGCAACAGCAGCAGCAACAGTTGCAGCTGC
AACAACAAAATGATATTTTACTGCGTGAGGATATCGATGATATAGACGCCTTTCTCAATCTGTCCCCCCTGCACTCATTG
GGCTCGCAATCCACCATTAATCCCTTCAACTCCAGCAGCAATAACAACAATCAAAGCTACAATGGAGGCAGTAATCTGAA
TAATGGCAACCAGAACAACAACAATCGCAGTTCAAATCCTCCGCAAAATAATAACGAGGACTCGCTGTTGTCCTGCATGC
AGATGGCCACCGAATCGAGTCCTTCGATCAACTTTCACATGGGCATCAGCGATGATGGCTCCGAAACGCAGAGCGAGGAC
AACAAGATGATGCACACTTCCGGCAGCAATCTGGTGCAGCAGCAACAGCAGCAGCAGCAACAACAACAAATCCTGCAGCA
GCATCAACAGCAGTCAAATAGCTTCTTCAGTTCGAATCCCTTTCTCAACAGTCAGAATCAGAATCAAAACCAATTGCCAA
ACGATCTGGAAATATTGCCATACCAGATGTCCCAAGAGCAATCACAGAATCTATTCAACTCGCCACACACAGCCCCAGGC
AGTAGTCAATAGCGTATACCCACTGTATATAACACTCTGTAGCGATAGGAAAAGATAGAATTGTATAACTCCAGGCAACC
CATATAACCACATATCCGTGTATTATCAAGTTTGGCCTCTGGCTCTCTTTATCGAACCTCATCTATCGGAAGCCCAGAGC
TAGTTGTAGATCTCAACAGACTGAGTATTGTCCCACCCCGCTCCCATTATGCGTTGTATATAACATAAACATAGGTGTAC
TATAGAAAAGGTCTC
        Other Products of this Gene
        Other Transcripts
        Name
        FlyBase ID
        Length (nt)
        Clk-RA
        FBtr0076785
        4422
        Clk-RD
        FBtr0100132
        3697
        Clk-RG
        FBtr0334647
        3028
        Clk-RH
        FBtr0334648
        3765
        Polypeptides
        Derived from THIS transcript
        Name
        FlyBase ID
        Length (aa)
        Clk-PF
        FBpp0099480
        961
        Derived from OTHER transcripts
        Name
        FlyBase ID
        Length (aa)
        Clk-PA
        FBpp0076500
        1023
        Clk-PD
        FBpp0099478
        1027
        Clk-PG
        FBpp0306709
        895
        Clk-PH
        FBpp0306710
        895
        Comments

        Transcript terminates at site supported by polyadenylated cDNA.

        Gene model supported by FBrf0102836. Two conceptual proteins possible from this transcript. Both observed in vitro. Clk-RF starts at an alternative Kozak consensus start site and contains the PAS A and carboxy-terminal domains.

        External Crossreferences and Linkouts ( 1 )
        Crossreferences
        RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
        Synonyms and Secondary IDs (2)
        Reported As
        Symbol Synonym
        CG7391-RF
        Clk-RF
        (FlyBase, 1996-)
        Secondary FlyBase IDs
          References (2)