FB2026_01 , released March 12, 2026
FB2026_01 , released March 12, 2026
Transcript: Dmel\hth-RF
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General Information
Symbol
Dmel\hth-RF
Species
D. melanogaster
Annotation Symbol
CG17117-RF
FlyBase ID
FBtr0100455
Feature type
mRNA
Associated gene
Dmel\hth
Evidence Rank
Length (nt)
2462
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 61 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
      cDNA Clones, End Sequence Only (ESTs)
      Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
      Sequence
      Sequence Downloader
      TTTCGATGAAATATCTTTCATCCGCACAGTGTATTTTTGACTGCGAAGCGCGTACGACGTGTGTCTGTGTTGCGTTGCGT
TCGAATAAAAAAGAGAAGAAAAGCGAAAAAGTGTTGCCGTCGGTGAAGTTTATTATTATTATGATTATTATTATTGCCCG
TTAACCACGCGTTTTGCCATCAATCAACAAATAAACAACACAAGAAACACTTTGGAAATCGCGCGCGTTTTTCCATCGCG
CGAACAAAACAATCACGTTTTTTAGTGTGTTTTTCAATCACAATCGAAAAGTTCTCCTTTTCACAATTGAAGGCCAAAAT
AAATACTGTTATTTGAGGGCCGCGGAGGGAATTTCTTTCAACGAGGGGATCCCGCCGATCCCCCCGCAAAAACAAAGAAA
CACGCAAATTGCCGTCGCAAAAACACAACAGAATATATTGCATTATATATTAACAATATAATTTGTTCATCTCTAGTAAC
GTAGTATGTAGAAGCAGCTGTGATAAATAGTGCGCATATTATACGAAAAAAGCAAAAAGAGTATACGACAAACAAATAAA
AATTAAAAGCAACCACAACTACTACTATAAAAATAACCAAGGAAAAGGCAAGGAAACTCGCAAAACGAGAGAGAGAGGAA
AAGGGAAAAAACGCCATGGATTTATGACAACAACAAATGCAACCCAGTAACAAATGATGTTGCAGCAACTACTACAATAC
ACGAGTATACCAAGAACATCAACAACAACAACTGCAACGGCAACCAACAACAAATTGTATACGATTTTTATAAACCAAAC
AAATGCTATGTAAATAATTATTATAACAAACACACAAGTAAAAAAAACATTCAAAACCAGATCTCCCGCTCTAGAAAACA
AACAACAAACGCGCGCGTAACAAAAACGACAACATCAACAATACAACAAGTATACAAACGTAATAATAATACATAAAATC
TAAACAAATGTGCCTGTGTTAAAAAAAAAGAAAGCAAAATCAAGAAGCAAAGCGTTCAAAAAGCAAAGGCTTCCCAATAC
ATGAAAAAAGTGCAAAACATATATAAAAATCCAAGAAAATAACATCCAAAACTGAAGAACTGGAAAAGCCAAGAGTAAAT
CTAAGGACTCCACACGGGCAGCTACAGTAGAGCTTCCCTAAAACCGAAGCAGTTGCAGCGGCGGAGCGGGACGTCGGTCA
GTGTGTTGCGCCCCCATTTGTTGTTCCTACTGTAAAAAGTGGCACAAATCGGGTTAGACGTCGCTCCCAGAGCATTAATG
GCTCAGCCCAGGTATGACGATGGCCTACACGGCTACGGCATGGACTCCGGAGCCGCAGCAGCGGCCATGTACGATCCACA
CGCCGGTCACCGGCCGCCCGGACTGCAGGGCCTCCCCTCGCACCACTCTCCGCACATGACGCACGCAGCGGCGGCGGCGG
CCACAGTGGGCATGCACGGCTACCATTCGGGGGCCGGGGGTCATGGAACACCTAGTCATGTATCGCCGGTCGGTAATCAC
CTAATGGGCGCAATACCCGAAGTACACAAACGTGATAAGGATGCGATTTATGAACATCCGCTATTCCCGCTTTTGGCGCT
GATCTTTGAGAAGTGCGAATTGGCCACATGTACGCCGAGGGAGCCCGGTGTGCAAGGTGGCGATGTCTGTTCGTCGGAAT
CGTTCAACGAGGATATTGCAATGTTCAGTAAACAGATAAGATCACAGAAACCCTATTATACCGCAGATCCCGAAGTCGAC
TCACTGATGGTGCAAGCAATACAAGTACTTCGGTTTCACCTTTTAGAATTAGAAAAAGTACACGAGTTATGCGATAACTT
CTGTCATCGGTATATATCGTGTTTAAAGGGTAAAATGCCAATAGATTTAGTGATCGACGAACGGGACACCACCAAACCAC
CGGAGTTGGGATCGGCGAACGGAGAAGGGCGCAGCAACGCCGACTCCACATCGCACACCGATGGAGCTAGTACACCAGAC
GTTGTGAGTACCCCCTTCGCGGGAGCACATGGTCCTATATTGGCGAGCTACAATGCGGTGGTGCACCCATGTTCGTAGTA
CGATAACGACCTTCTTGCAAAAACGAAGCGGGTGCTCACAATGCCCTGGGATTAAATGAATCAATAATAATAATTGCGAT
CAATCAATACGAAATGCCAATCGAGCGAATAACCGAGCGATAACCACAAAAAAAAGAAAGAAAAGAAAGTAAAGAAATGA
ATGTTGCTGCACACTGTTCAAGCAAATTAAGTAAAATTAATTCACTTTGTGCGAAAACAAACATAATATTAATATTGATG
AATTCAAATCCAAATCCGAACGCAGAAGAAGTTGTACGTCATTATGAACACACACAAAACACCCACACACACATTGTAAA
TTAGTCAGAATCAGTAAATGAAAACAAAAAAAAAAAAAACATACAAAAAGCGAAGAAAGCCC
      Other Products of this Gene
      Other Transcripts
      Name
      FlyBase ID
      Length (nt)
      hth-RA
      FBtr0082256
      4226
      hth-RC
      FBtr0082255
      6557
      hth-RE
      FBtr0100454
      3868
      hth-RI
      FBtr0344145
      6340
      Polypeptides
      Derived from THIS transcript
      Name
      FlyBase ID
      Length (aa)
      hth-PF
      FBpp0099879
      266
      Derived from OTHER transcripts
      Name
      FlyBase ID
      Length (aa)
      hth-PA
      FBpp0081733
      472
      hth-PC
      FBpp0081732
      487
      hth-PE
      FBpp0099878
      266
      hth-PI
      FBpp0310558
      266
      Comments

      Based on cDNA(s) that contain early stop codon; may or may not produce functional polypeptide.

      Transcript terminates at site supported by polyadenylated cDNA.

      External Crossreferences and Linkouts ( 1 )
      Crossreferences
      RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
      Synonyms and Secondary IDs (1)
      Reported As
      Symbol Synonym
      hth-RF
      (FlyBase, 1996-)
      Secondary FlyBase IDs
        References (2)