FB2026_01 , released March 12, 2026
FB2026_01 , released March 12, 2026
Transcript: Dmel\f-cup-RC
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General Information
Symbol
Dmel\f-cup-RC
Species
D. melanogaster
Annotation Symbol
CG9611-RC
FlyBase ID
FBtr0112937
Feature type
mRNA
Associated gene
Dmel\f-cup
Evidence Rank
Length (nt)
3407
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 27 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
      cDNA Clones, End Sequence Only (ESTs)
      Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        Sequence
        Sequence Downloader
        CTCAGTCAGCAAATTTGGGCAATTTTTGGAAGCCTTAGTAAAAATTAAAAAAAAAATTCTTTAGTTCTAAAATTGATTTC
GCTATCAACCGACCGCAAAGAAGTCGCGCATAAAACTCTTGAAGACACCGGCTGCCATTGCGTGGATAATCCAAGGAAGC
CGAGGCAGAAGCCAAACGATAGACAAAGGGATCCCCAACGAGATGATGAACTTAAGCAACGTAGAACTTGGCTCATTCCG
CGGTGCCCAGGAATGTGACCAGGCATCCGCATTTGGCGGCGACTTCGACTTTGGCCATTCCTGCTTCACCCACTACGGCT
GTCCAAGCGACATGAGTGACAAAACCGGCCGAGGACGGAGTAACCCCTCCACCAGCCGGATTCCTCGCAGCGCACAAAGT
CCGCGCCAAGCCTCAGTGGTCCACTCGCCCAGGACAAACTGTGCCTTTCGCCCGATTTTTCACGAGAGGAGCACTCACGA
GGACGACCAGGTGCTCACCCAAGAACTATGGAAGCTGGCGCGTAAATCGGGCACCCTGAATCTTTCCAACAAAGCATTGG
CCAGAGTGGTGACCCAGGAGCAGCTGCGTCGTTGGAAGTCCATGGTCCCACCAAAAACAAGTCAGCCGGTCAGTGATCAA
TGGAGCCCCGGCCTCGTTGACAGCAGCGCCTTGTGGTTCCAGTTCATGTGAGGCAAAAGCGATTTCGATCTCGAACTTGA
CCCTGGAGAATCCCAAAAATGGAGCGAAGCATATTTGCCGCTTCACTGACCAGTATGCGGGGCTCGTAATGATCCATAAA
GGTGCTCCAGGGGTGCGTCCCCAGATCAGTCATCGCTTGATTCAGTCTACCCACTGAGCTGAGCGCCATCGGTTGTGTGA
CTCTACCGAAGCATCTCCCAAGATTGCGTCCTCCAGGAAACAGCTCACTTCGTTCTGCATGTGCGGTCCTTATCCGCGGA
GGCGTCGCTACTACCAGATTCGCGAATTCCAGATGGCCTCCTCGGCGGACGAGCTGGAAAGCGAGGATCCGGACGATGAG
CTGGAACTGGACGATTCCGAACCTCCAACCCGCGCTGAAGACTTGCCCAAGCGACTGTACGACATTAACGAGGCGGATGC
GGACAGCAAGGCCGTAAATCTAGAGCAGCTAACGATTAAAGAGGAGGATGCCTGGTGGAACCAAGTGCCATTGAACAACC
TGGACCTGAGCTCAAACACCTTAACGCACATATCGCCAAAGATCGAGAATCTGCAATCACTTACCGTGCTTACGCTGCAC
GATAATGCTTTGGTGGAGTTACCACCGGAGATCGGCAAGCTGGAAAAGCTAGTGCGCCTTAATGTGAGCCACAACAAACT
CAGCCAGCTGCCGCGTGCGATGTACAGTCTACCGGAGCTGCGGCACCTCAACATCTCGTACAACGAGTTCGTCGAACTTA
ATCCGGACATCAGTGACCTTCACATGCTTGAGTTTTTGGACGGTGGGCATAACAATATTCAATCCCTGCCCGGTGGCATT
GGGTTCCTGGTGCGTCTAACTGCGCTCTTGTTGCCCTATAATCACATCAAGGAACTGCCGCCCGATCTTGTTAACATGCG
CTCTTTGCAAAAGATTGATCTGATGCATAATGATCTGACCAGCTTGCCGGAGGATATGGGCCTTTTGAGAAAGCTGGATT
GCCTTTATCTGCAGCATAACGACATACTGGAACTGCCCGAGTTCGAGGGAAACGAGGCCTTGAACGAGCTACATGCCAGC
AATAATTTCATCAAGATCATACCAAAAGCTATGTGTAGTAACTTGCCACACCTGAAGATACTGGATTTGCGGGACAATAA
GATCACGGAGCTGCCCGACGAGCTGTGCCTGCTGCGCAATCTAAACCGTCTCGATGTGTCCAATAATACGATCAGCGTGC
TGCCAGTCACATTGTCCTCCTTGGCTCATCTGATTAGCCTGCAGGTGGAGGGAAATCCCATAAAGACAATCAGACGCGAC
ATCCTACAGTGTGGAACAACGAGGATCTTAAAGACTCTGCACGATAGAGCTGTGGCGAAGGCCAAGGAGGAGGGAGGTGG
CGTCGACGACGCTTCCACGTCAGCGGGCATCAGTGTTACCCGTTTGCGTGGTGGCCAAATGGACGATGGTGATATACCCG
GAAACTTTCCGGATAGCTTTCACCACCAGCAACAGCAGAACGGATTCCAATGTCCTTGTTCATATCCATGTCAGCAGCAG
CAAATGCAGCAGCAGTTTTGTGTGTATGAGCCGCTCAGAAACTGTCAGGAATATGATCGCCAGACCCAAGGGCGCATATA
TGAGCCCGAAAACTACCAACAGCAACATCAGAATGGCAGCTTGAGATCACTTTTTGTGCAACAGCAGCAGCAGCGAATGG
AGTATCCCTATCCAGGATACTTTATGTACCAACAGCAGCAGCAACAGCAGTTCTCCTATGAGCAAGATCCATCCTCTCGC
TCAGCTGTCCATCCACGTTGGGTGTAGTATACAAACTACGACATACACGTACATTAGCTGTCAATCTGGAGGAGCTCACG
TCAGTGCCTGACCAGGTGTTCCAGATCGCCAGGGATGAGGGTGTGCATGTGGTGGACTTTGCGCGCAACCAGCTGAGCAC
TTTGCCCAATGGACTGCAGCACATGAAAGATTTAGTTACGGAACTAGTTTTATCCAACAATGTCATCGGCTATGTGCCAC
AGTTCATCTCCCAGTTTACACGTATATCTTTCTTGAATTTGTCCAACAATCTGTTGAATGACCTGCCCACGGAGTTTGGT
GTCTTGAATACACTGCGTGAACTAAACATTGCAAACAATCGCTTTCCGTGTATTCCCAACTGTGTGTACGAGCTGCAAGG
CCTGGAGATCCTCATTGCCAGTGAGAACCACATAAAAATGTTAAATGTATCGGGTCTGCAGAACATGCGACGTTTGAGCA
CATTGGATTTGCGCAATAACGACATCGAGACAGTGCCACCAATTTTGGGGAACCTGACAAACATAACTCACTTGGAGCTG
GTGGGCAATCCATTTCGACAGCCCCGCCACCAAATCCTGATGAAGGGCACTGACGCCATCATGTCGTATTTGCGCGATCG
CATACCCACATAGAAGAGCAATTCACACCGTTTTTTGAGAAACACTTCACTAGCAATATGTTTATTTTGAGGAATAGCGT
AATGGAAATTGATAGATCCGCTCGACCATGCCCACAAACAATCAATCTATGGATTGGCTGTTTGTGGACATGGATGAGGG
GTGGCGTTACAAGTACAACATACGACACACACCGTGCATCAACCAACCAAACTAGTCTGCATGCCACAATACCTAATGCA
CGTTGTTAATCCTGGCTGAGTATCTGCAATAAATGGGAATAGTAGGG
        Other Products of this Gene
        Other Transcripts
        Name
        FlyBase ID
        Length (nt)
        f-cup-RA
        FBtr0082846
        2558
        f-cup-RB
        FBtr0082847
        2470
        f-cup-RD
        FBtr0112938
        2532
        f-cup-RE
        FBtr0112939
        2219
        f-cup-RF
        FBtr0334526
        2885
        f-cup-RG
        FBtr0334527
        2797
        f-cup-RH
        FBtr0334528
        2795
        f-cup-RI
        FBtr0334529
        3319
        Polypeptides
        Derived from THIS transcript
        Name
        FlyBase ID
        Length (aa)
        f-cup-PC
        FBpp0111850
        522
        Derived from OTHER transcripts
        Name
        FlyBase ID
        Length (aa)
        f-cup-PA
        FBpp0082311
        693
        f-cup-PB
        FBpp0082312
        650
        f-cup-PD
        FBpp0111851
        474
        f-cup-PE
        FBpp0111852
        620
        f-cup-PF
        FBpp0306593
        802
        f-cup-PG
        FBpp0306594
        759
        f-cup-PH
        FBpp0306595
        571
        f-cup-PI
        FBpp0306596
        522
        Comments

        Transcript terminates at site supported by polyadenylated cDNA.

        Evidence supports alternative splice leading to premature stop codon and/or downstream start; may or may not produce functional polypeptide.

        External Crossreferences and Linkouts ( 1 )
        Crossreferences
        RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
        Synonyms and Secondary IDs (2)
        Reported As
        Symbol Synonym
        CG9611-RC
        f-cup-RC
        Secondary FlyBase IDs
          References (0)