FB2026_01 , released March 12, 2026
FB2026_01 , released March 12, 2026
Transcript: Dmel\Nhe2-RI
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General Information
Symbol
Dmel\Nhe2-RI
Species
D. melanogaster
Annotation Symbol
CG9256-RI
FlyBase ID
FBtr0306016
Feature type
mRNA
Associated gene
Dmel\Nhe2
Evidence Rank
Length (nt)
6466
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 10 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        Contained within the annotated transcript, internally consistent
        End(s) extend beyond the annotated transcript, internally consistent
          Sequence
          Sequence Downloader
          TTCTCGACTGTTGAGCGCGCAACTGTTTTCATTTTTCCGGCTCGGTCGCAAAATTCGATTTTCCACTACACTTTATTTGG
GAACAATTCGGATACGTTTCGGGAAACTTTTTAAATATGCAAATCGAACCGAAGCAAGCCGTGTTTTTTCCTTACTTTTA
AGGTTGTGTGTTTTTATACTCGTAATGTGTAAACATACGTATACGTATGTATCTACGCCCTCTTCAGTCAATAAATATTA
ATGCTATTTTGTGCAGTTAGACAGGCATGAATTAGAAAGCATTATTTATTGCACACGTCTGCAGTGTGAATCAAAACAAA
ATCGGAAGCGGCCCGAGAGTGGGTGAGAAAGAGGAGGAGGAGGAGAGCGTGAGAAACCCAGTGGAAAAGAAATAACAGCT
GCCGGCTGATTTGTTGCCGAAAAGGAATACGAAGAAAGAAGAAAAACGTGAAGAAACATAGCAGCTGAAAGGAACCTGGC
TGAGTAGAAGTACGTTGTAGCATGCCAGGATCAAAAAAGTGAATAACAGATCATAATGAGCATCCGCACGGAGCAGGATT
ACGACAGTGCCACTCCGGCGCTGGCACAGCAAATGAATTTGGCCCGAAGAGCCTGCTGGAGGATCAAATCCTACAGCTCG
GAATCCCTCTTCAAGACCTATGCTTCTGTAATAACAGATACTAGTGCAAATGAAATCGATGCAGAAGCACCTCCACCACC
GAGAGATAAAACCAAAACGAGAATAGAGCCACAGATAGCGCCCGCAAAACGCAACTCATCCTGCACATCATCCGACTGGC
GGGGGATGTTCAGCAAAAGGACGCTGCTCATCTGCGCCCTGGCACTGATCCTTGGAAGTGCCCAGGCGCGGCCCAACACG
AGTGCTGTGGGAGTGGCTCCGAGAAAGGTCAGCCAGGACATTGTGGATGCGGTCACCCAGCTAAATCTGGGCCAGTCGGC
GCCCATTGATGCGGTGGATGTGGGGCTGGATCCAACGCCATCGGCGAGAGTGCCACGTCCCGAACCATTGAAATCCGGCG
ACGAGAATGCGAAGGGCGACGAGGGACACAAGATGGAGCGGTATCCCCTCTCCAGTGTGGACTTCGCTCGGGTAAAGACG
CCGTTCATCATTGGAATCTGGATCCTGTCGGCCAGTATAGCTAAAATCGGTTTCCATATGACGCCCAAACTGCACCTAAT
ATTTCCGGAATCGTGCCTGCTGATTGTCGTGGGCGTGGTCATTGGCGTGGTGCTCTATTTCTGCACCGATGTCGCCGTCT
CCCCGCTGACTCCCAATACCTTCTTCTTCTACATGCTTCCACCGATTATCCTGGACGCGGGCTACTTTATGCCCAACAGA
TTGTTCTTCGACAACCTGGGCACCATCCTGCTGATGGCGGTGGTCGGAACCATCTTCAACATAGCTACCATCGGTGGCTC
CTTGTACGCCTGCGGAAAGATGGGAATTTACGGGGAAAGCGAGACTCCGGGTCTAATGGACGTGTTTCTATTTGCCTCAC
TGATATCTGCAGTGGATCCGGTGGCCGTATTGGCCGTATTCGAGGAGATACACGTGAACGAGATCCTATACATTGTCGTC
TTTGGCGAGTCCTTGCTGAACGATGCCGTCACGGTTGTGATGTACCACATGATGGAGTCCTACAATGAGATTGGCTTGGA
CAAAATCATCGCCCAGGACATTGCCAGCGGTGTGGGTTCCTTCTTCGTGGTAGCGCTCGGTGGCACTGCCATAGGCATCA
TCTGGGGCTTTCTCACGGGCTTGGTGACCCGATTCACCGATCACGTGCGTGTCATAGAACCCATTTTCATATTTGTGATG
GCGTACTTGGCCTATCTCAATGCGGAAATATTCCACATGAGCGGCATTTTAGCCATCACTTTCTGTGGTATCACAATGAA
AAACTATGTGGAATCTAATATTTCACAAAAGTCGCATACGACTGTCAAATATGCCTTAAAGATGTTGTCCAGCTCGGCGG
AGACCATTATATTTATGTTCCTAGGCGTGGCCACTGTGAACAACATGCACGTATGGAATACGTGGTTTGTAGTGCTGACC
ATTGCCTTCTGTTCAGTATTTCGTGTCATTGGCGTCATTTTGCTATCGGCCCTTGCCAATCGCTTCCGCTTGCACAAATT
GTCCCGGGTGGATCAGTTTGTGATGTCCTACGGAGGATTGCGTGGTGCTGTGGCCTTTGCCCTGGTGCTGTTGGTGGACG
AGAATGTGGTTAAGCAGAAGAACATGTTTGTTACCACCACGATAGCTGTGATTTACTTTACTGTCTTCCTGCAAGGAATC
ACTATAAAGCCGCTGGTGAAAATCCTTAATGTCAAGCGCGCTAATAAACGCAAGCCAACCATGAATGAGCGCATTCATGA
ACGGTTCATGGATCACTTGATGGCTGGAATTGAGGATATAGTGGGCAAGACGGGCAACTACAACGTGCGTGACAAGTTCA
AGCGTTTCGACAATCGCTTTATTCGCCCGCTGCTGATCAGAGATCTTAAGGGAGCTGAGCCGAAGATCATCGAGACGTAC
TCCAAACTGACGATGCGCGATGCTATGGAAGTTATGAGGCGAAATCCATCCACTATTGGCCAGATGACGGGAACCGAGTC
GATGAGCGCCCTTTTCCGGAATTATACCAATAACTATATTGGCGGCAGCCCCAGTCTGACAAATCTAGACAATACCTGTT
CCCGTAATCTGGACATGGCTGAGCTGGATTATAATCCATCCAAGAAGGATCTAACCGATGCCAGGATCCATCATCTTTTG
GCCGAAGAACTGAAGCCTTATAGAAGGCACCGTCGTCTTAGTTATAGCCGACACGCAGTAGATGACAGAGATTTGTCAAC
CCAGGTCAATTACAAGATGCAAATGAACTTCAGGCGGATGTTTAATGATCGAAAACATCACAAACGCAGCAAACGTGGTG
CCAGCAACAAGGAGGCCAAGGAGAACGTTAAGCAGAATCATGTCTCGTTCCATGACTTTCAACAGAACGGCACCACTAAG
CAACTCACCAATGGTACGGAATCGAGTTCAAACCATTCACGAAAAAAATCTTACAGAAAAAGACATACTCACAATTCACT
TAACAAATATCGTAGATTAGAAATAGCCGAGGAGTGCCAACAGAATCCCAACGAGATCAATGTTGTTGGCCCGAGCGACG
ATTGGGATGATGGCCTGACCTTCACCGCCAAATCATCACCTGACTCGGATCGTGCCAATAACAATTCTCTGATAGCCCAC
ATCCAAAACCTGCCGGGTTTCGATGCCTCCAAGGCCCGTATCGTCGTCCAGCACTATGCGCCCAAGGCCGACGACAATCC
GGACACAGATATAGAGTCCCCGGAGCAGGCCATTGGGCCCACGGCCGCCGAATTGATATTGCCGTGGCGGCGGGATCGTT
CATACCAGAGCATTGTGGCCGAACATCCCATTCCCGAGGAGGATCGTAATCTGTCCCGCGAATCCGACGGAGAAAGGCGT
GTGGCCACACCCACCGCCACGGAATCCCAATTGCCGTGGAAAAGACAGGGTGACGAATGCACGGATGCAGTGCAGCAGAA
CGAGTTTCCCGCTTGGGCCTCCAACAAGGAGTACTTGGCTTACAATTCCCCCAGTGCAACATTCCTAGGTGGTATAAACA
AGCCTAAACAGCCCAAGTCCGTCATAGGTCTCTTCCGCCGTGAGAGTTCCAGCTCGAAGGCCGGGAGCGTTGGCGTCGGC
AGCACAGGAGCCATGGACTCCGCCGCCAGTGGCTCCGAAACGATGGTGGTGTCCATGTCCAGCCAACCGCCCAACGCTCC
ATCGACGTCCATCCACAATCCGCGGCTGGACAAGCGCTCCCAGTCGATCTCCTCAAGCTCGCTGGGCGCCGGAGCCCATC
AGCTAGGTCCGGAGGGTCATTCCGGCCCATTTCCGGTTACGGCCAGTCATCGGCGGAACGTGCGCAGGGGCTCCATGCTG
GAGCTAAGCGGCGGCGTCTCAATTGAATCTGATTAATCAAATCCGAAACGAGCACAGAGCCAGAGCAATTAACTAGCTAA
ACTGTACAGTAAATGCACAAACACTCACCATATTTCTACACGCACACAAGCACACACTGACACCAAACTGTTATACAATT
GAGAGCACCTGTGATAACTTTCCCTAGACACAATTTCTATGCCTAAAGCGTATCTTTAAACGGCTTTAATCACACGAACT
ATGTAGACACAATACCGGAGGAGTCGTCGTACCAGCACGGACACTCCAAGTCCTTGTGCGAGCCGGCGGACTCCGATGAA
TGGGAGGGAGCACCGTTGTCCGCAGCCGGCGGAGCAAACAGCGAGCTTTTGATGCGAATGAGCGGCAGGGAACCACTCCT
GCCACGCCCATCCAACACGCCTCGTGCCCAGATTCGGCGCATGAACGCCGGGGCGGTGGGCGGTGCAGGCGTGAGCCAGG
CGGGCCGTAAGAACCAGGTGACCAAGGCACTGTTGGACTACGAGGATTCCGAAACCGACTCCGATGAGAACGATGATGAT
GAGGACGAGGACTTCGATTCCTACGATGACGAGAACATTGTGGTCACCACCTTTACAACACCGGCCACGGGCAGAAGACC
GGGATCTAGTCCAGGATCCGGGTCAGAAGCCAACACCGCCACTACCACCACGACAAGCATTCGGCTGACCCGCAACAACG
ACGAAAGCATCATTTGAGTATCAAGCACGGATGGCGACGCGGAGGATCTGGAGGATGATGAGCCACCGGTGTCAGCACCA
CCATCTAACAATCCAAAAAGTTTGCGTCTGCATCTATTCCCGTATGAGATGTTCTAAGCTCACATTTAAATGACCTAGGT
CGTAAGACAAAAGTTGAAAAAAAACGTTGGAAAATAGTTTCAAAATAAGGTTTAGACCAAAAAGGTTTATAACTATATTA
ACATATGAATCGGACAAATGTTAAGATAATGGAATAGCAAAAATTGTATATAACACCAGATATGAATAACTTAATTAATT
TCTCTTGGTCGTTTAAGTCGCTTTTTAAGATTTTTAACTTCCAGTTTTGTGCTTAGTCCCGATCAATTCTTATTATGTAC
CACAAACATATATATCGAAAAATAATTTAGTGATTTCAGCTGATGTGTTCCAAAATAGCAAGCAAAAAAATTGTGAATTG
TGTAATAATTAACACAGCGTAGCCAAAGTTCATGTTAAGCGTACAACTAACGTTTATTTCTTTATTTGTAATTTAGACAA
AATGTGCTAACTGAAAATCACATTGCGAGTATATGTTGCAAGCAGTACTTAAGCGCTTACTTAGTTTAGTTCAATTTTAG
TCTTAGTTATTAAAGAGTTTAAAGCAATTAATTTCCGTATAGCCGCAGAGTCAGAACAAAAAATAATGCAGTAAAGTTTG
TCTCAGCTGGAACTGTCAGTAAACTTGCATCATTCATCAGTGTAAATAAATTTTTGGAGTATTTCGAAACTGTTTTGGGA
ACGGCAATGACCTCTATATGAACTGTATGATTTGGAAACGGTTCTTAAAAGAGGCTTTAAAGCAGGTTATGAAGCAGCGG
ATTTTCTACAGCCTCTATGAGATCTTACATCTTGTTGTAATACTCCAGCCCCCTTATAACTAGTTTCAAAACAAGGTTAC
TTCGCAGATACAGTTGAGCAGAATTTTACCTTACCCTAACTATAAAATATACACAAATGAAGTAACTGGTGTTTGACAGT
AAAACGGACAGAGTTATGTAACTTAAAATTATTTTTGTAAACATTTACGTACGATAAAGATAAAGATATAGATGCCCAAT
GGATCATGTTTGAACGAGCGAGAGTTTTGCAATAGCTTCTGTATGGAATTTGAATGTATGACTAGGATTGAGTTAACCAA
GCATAAGCGTGAACGTGCTCAAATCCCAAGTAAAAACTAGGAATAGTTGAAACAAGTAGATTTACTATGCTGACATAGAT
TTGAAGATGCATTAAAAGGAAGAAGGAACTCAAATTTCCAGACCAGACACCCACGGGACACACGGAGTCAACTGAGAACA
CAGTAGCCAATATCCGGAATGATACTTATTCTGGAACCTACCTACCTAAATATACTTGCGTGGACTGCTAACGATAGAGC
GTGGAAATGGAACACATACCTACCTACTACGTTTAACACAAAATAAATGCATATATTTTTAAACTCATGGGCAAACCGCA
TAGTAGCATAGAACTTGAATTAATCCATTTACATACCTGTAAACTTGGTATTTTGTAATCCCAATAGGTTCTGTACAAGA
ATGCCTTCGCCAGATCAGATAGAATTGGTTACTTTAGTTCTTCGCATTTTATTTTTATCAGTAAGACAATAAACAGCTAC
AAGAAGAGCTGGATCTTGGAAATTGTCATTTTGAAATAAATCATTAGTGGAAAACCAAAAAATCAG
          Other Products of this Gene
          Other Transcripts
          Name
          FlyBase ID
          Length (nt)
          Nhe2-RA
          FBtr0081466
          4788
          Nhe2-RB
          FBtr0081467
          4794
          Nhe2-RC
          FBtr0299908
          4578
          Nhe2-RD
          FBtr0299909
          2838
          Nhe2-RE
          FBtr0299910
          4602
          Nhe2-RF
          FBtr0299911
          2741
          Nhe2-RG
          FBtr0299912
          6233
          Nhe2-RH
          FBtr0306015
          5898
          Nhe2-RJ
          FBtr0334171
          4432
          Nhe2-RK
          FBtr0334172
          4792
          Nhe2-RL
          FBtr0334173
          4686
          Polypeptides
          Derived from THIS transcript
          Name
          FlyBase ID
          Length (aa)
          Nhe2-PI
          FBpp0297158
          1166
          Derived from OTHER transcripts
          Name
          FlyBase ID
          Length (aa)
          Nhe2-PA
          FBpp0080995
          1291
          Nhe2-PB
          FBpp0080996
          1291
          Nhe2-PC
          FBpp0289186
          1219
          Nhe2-PD
          FBpp0289187
          672
          Nhe2-PE
          FBpp0289188
          1229
          Nhe2-PF
          FBpp0289189
          723
          Nhe2-PG
          FBpp0289190
          1322
          Nhe2-PH
          FBpp0297157
          1222
          Nhe2-PJ
          FBpp0306288
          1305
          Nhe2-PK
          FBpp0306289
          1177
          Nhe2-PL
          FBpp0306290
          1257
          Comments

          Extended 3' UTR based on RNA-Seq and/or EST data.

          5' UTR based on RNA-Seq data.

          Monocistronic transcript; alternative dicistronic transcript(s) exist.

          External Crossreferences and Linkouts ( 1 )
          Crossreferences
          RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
          Synonyms and Secondary IDs (1)
          Reported As
          Symbol Synonym
          Nhe2-RI
          Secondary FlyBase IDs
            References (0)