FB2026_02 , released June 18, 2026
Transcript: Dmel\Nhe2-RA
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General Information
Symbol
Dmel\Nhe2-RA
Species
D. melanogaster
Annotation Symbol
CG9256-RA
FlyBase ID
FBtr0081466
Feature type
mRNA
Associated gene
Dmel\Nhe2
Evidence Rank
Length (nt)
4788
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 8 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        Contained within the annotated transcript, internally consistent
        End(s) extend beyond the annotated transcript, internally consistent
        Sequence
        Sequence Downloader
        AAAATCTTGAGTCGCGTCGCGAGGAAAATTCAGTCATCAACGCGTGTCCATCGAATCGGCAGTGAAAATGTGCCAGCGGC
GGTTCTTCAGCAGCAAATACACCAGTTTCCACAAGAATCACATCAAGTTGTTTGCCGTTTACATGAAAACGGCGAATTTG
ATGCAAAATTCGAACGTGCTAAAGCGTTCGCTGTAAGCGCCGCTGCCTGTGCCGTCGCCTCCCCCTCTCCCATGCAAAAA
AGAAGAAAAATTAACAAAAAGTTGATTCCCGGCTGTGTGTGCTAGTGCTTTCAGCTTAGTGCTAAATGGAAAATAAAACC
CCCTAACGCTTGAATGCAAAGTTAAAATGTCGGAACGGAAAAACCCCAAGAAGCTAGTGAAAATCCTTGTTAAGAGTTAT
TACAATTGAAAATCCATTTAGGCGTGTCTAGCCAAATAACAGTGAAGAAACATAGCAGCTGAAAGGAACCTGGCTGAGTA
GAAGTACGTTGTAGCATGCCAGGATCAAAAAAGTGAATAACAGATCATAATGAGCATCCGCACGGAGCAGGATTACGACA
GTGCCACTCCGGCGCTGGCACAGCAAATGAATTTGGCCCGAAGAGCCTGCTGGAGGATCAAATCCTACAGCTCGGAATCC
CTCTTCAAGACCTATGCTTCTGTAATAACAGATACTAGTGCAAATGAAATCGATGCAGAAGCACCTCCACCACCGAGAGA
TAAAACCAAAACGAGAATAGAGCCACAGATAGCGCCCGCAAAACGCAACTCATCCTGCACATCATCCGACTGGCGGGGGA
TGTTCAGCAAAAGGACGCTGCTCATCTGCGCCCTGGCACTGATCCTTGGAAGTGCCCAGGCGCGGCCCAACACGAGTGCT
GTGGGAGTGGCTCCGAGAAAGGTCAGCCAGGACATTGTGGATGCGGTCACCCAGCTAAATCTGGGCCAGTCGGCGCCCAT
TGATGCGGTGGATGTGGGGCTGGATCCAACGCCATCGGCGAGAGTGCCACGTCCCGAACCATTGAAATCCGGCGACGAGA
ATGCGAAGGGCGACGAGGGACACAAGATGGAGCGGTATCCCCTCTCCAGTGTGGACTTCGCTCGGGTAAAGACGCCGTTC
ATCATTGGAATCTGGATCCTGTCGGCCAGTATAGCTAAAATCGGTTTCCATATGACGCCCAAACTGCACCTAATATTTCC
GGAATCGTGCCTGCTGATTGTCGTGGGCGTGGTCATTGGCGTGGTGCTCTATTTCTGCACCGATGTCGCCGTCTCCCCGC
TGACTCCCAATACCTTCTTCTTCTACATGCTTCCACCGATTATCCTGGACGCGGGCTACTTTATGCCCAACAGATTGTTC
TTCGACAACCTGGGCACCATCCTGCTGATGGCGGTGGTCGGAACCATCTTCAACATAGCTACCATCGGTGGCTCCTTGTA
CGCCTGCGGAAAGATGGGAATTTACGGGGAAAGCGAGACTCCGGGTCTAATGGACGTGTTTCTATTTGCCTCACTGATAT
CTGCAGTGGATCCGGTGGCCGTATTGGCCGTATTCGAGGAGATACACGTGAACGAGATCCTATACATTGTCGTCTTTGGC
GAGTCCTTGCTGAACGATGCCGTCACGGTTGTGATGTACCACATGATGGAGTCCTACAATGAGATTGGCTTGGACAAAAT
CATCGCCCAGGACATTGCCAGCGGTGTGGGTTCCTTCTTCGTGGTAGCGCTCGGTGGCACTGCCATAGGCATCATCTGGG
GCTTTCTCACGGGCTTGGTGACCCGATTCACCGATCACGTGCGTGTCATAGAACCCATTTTCATATTTGTGATGGCGTAC
TTGGCCTATCTCAATGCGGAAATATTCCACATGAGCGGCATTTTAGCCATCACTTTCTGTGGTATCACAATGAAAAACTA
TGTGGAATCTAATATTTCACAAAAGTCGCATACGACTGTCAAATATGCCTTAAAGATGTTGTCCAGCTCGGCGGAGACCA
TTATATTTATGTTCCTAGGCGTGGCCACTGTGAACAACATGCACGTATGGAATACGTGGTTTGTAGTGCTGACCATTGCC
TTCTGTTCAGTATTTCGTGTCATTGGCGTCATTTTGCTATCGGCCCTTGCCAATCGCTTCCGCTTGCACAAATTGTCCCG
GGTGGATCAGTTTGTGATGTCCTACGGAGGATTGCGTGGTGCTGTGGCCTTTGCCCTGGTGCTGTTGGTGGACGAGAATG
TGGTTAAGCAGAAGAACATGTTTGTTACCACCACGATAGCTGTGATTTACTTTACTGTCTTCCTGCAAGGAATCACTATA
AAGCCGCTGGTGAAAATCCTTAATGTCAAGCGCGCTAATAAACGCAAGCCAACCATGAATGAGCGCATTCATGAACGGTT
CATGGATCACTTGATGGCTGGAATTGAGGATATAGTGGGCAAGACGGGCAACTACAACGTGCGTGACAAGTTCAAGCGTT
TCGACAATCGCTTTATTCGCCCGCTGCTGATCAGAGATCTTAAGGGAGCTGAGCCGAAGATCATCGAGACGTACTCCAAA
CTGACGATGCGCGATGCTATGGAAGTTATGAGGCGAAATCCATCCACTATTGGCCAGATGACGGGAACCGAGTCGATGAG
CGCCCTTTTCCGGAATTATACCAATAACTATATTGGCGGCAGCCCCAGTCTGACAAATCTAGACAATACCTGTTCCCGTA
ATCTGGACATGGCTGAGCTGGATTATAATCCATCCAAGAAGGATCTAACCGATGCCAGGATCCATCATCTTTTGGCCGAA
GAACTGAAGCCTTATAGAAGGCACCGTCGTCTTAGTTATAGCCGACACGCAGTAGATGACAGAGATTTGTCAACCCAGGT
CAATTACAAGATGCAAATGAACTTCAGGCGGATGTTTAATGATCGAAAACATCACAAACGCAGCAAACGTGGTGCCAGCA
ACAAGGAGGCCAAGGAGAACGTTAAGCAGAATCATGTCTCGTTCCATGACTTTCAACAGAACGGCACCACTAAGCAACTC
ACCAATGCCGAGGAGTGCCAACAGAATCCCAACGAGATCAATGTTGTTGGCCCGAGCGACGATTGGGATGATGGCCTGAC
CTTCACCGCCAAATCATCACCTGACTCGGATCGTGCCAATAACAATTCTCTGATAGCCCACATCCAAAACCTGCCGGGTT
TCGATGCCTCCAAGGCCCGTATCGTCGTCCAGCACTATGCGCCCAAGGCCGACGACAATCCGGACACAGATATAGAGTCC
CCGGAGCAGGCCATTGGGCCCACGGCCGCCGAATTGATATTGCCGTGGCGGCGGGATCGTTCATACCAGAGCATTGTGGC
CGAACATCCCATTCCCGAGGAGGATCGTAATCTGTCCCGCGAATCCGACGGAGAAAGGCGTGTGGCCACACCCACCGCCA
CGGAATCCCAATTGCCGTGGAAAAGACAGGGTGACGAATGCACGGATGCAGTGCAGCAGAACGAGTTTCCCGCTTGGGCC
TCCAACAAGGAGTACTTGGCTTACAATTCCCCCAGTGCAACATTCCTAGGTGGTATAAACAAGCCTAAACAGCCCAAGTC
CGTCATAGGTCTCTTCCGCCGTGAGAGTTCCAGCTCGAAGGCCGGGAGCGTTGGCGTCGGCAGCACAGGAGCCATGGACT
CCGCCGCCAGTGGCTCCGAAACGATGGTGGTGTCCATGTCCAGCCAACCGCCCAACGCTCCATCGACGTCCATCCACAAT
CCGCGGCTGGACAAGCGCTCCCAGTCGATCTCCTCAAGCTCGCTGGGCGCCGGAGCCCATCAGCTAGGTCCGGAGGGTCA
TTCCGGCCCATTTCCGGTTACGGCCAGTCATCGGCGGAACGTGCGCAGGGGCTCCATGCTGGAGCTAAGCGGAGACACAA
TACCGGAGGAGTCGTCGTACCAGCACGGACACTCCAAGTCCTTGTGCGAGCCGGCGGACTCCGATGAATGGGAGGGAGCA
CCGTTGTCCGCAGCCGGCGGAGCAAACAGCGAGCTTTTGATGCGAATGAGCGGCAGGGAACCACTCCTGCCACGCCCATC
CAACACGCCTCGTGCCCAGATTCGGCGCATGAACGCCGGGGCGGTGGGCGGTGCAGGCGTGAGCCAGGCGGGCCGTAAGA
ACCAGGTGACCAAGGCACTGTTGGACTACGAGGATTCCGAAACCGACTCCGATGAGAACGATGATGATGAGGACGAGGAC
TTCGATTCCTACGATGACGAGAACATTGTGGTCACCACCTTTACAACACCGGCCACGGGCAGAAGACCGGGATCTAGTCC
AGGATCCGGGTCAGAAGCCAACACCGCCACTACCACCACGACAAGCATTCGGCTGACCCGCAACAACGACGAAAGCATCA
TTTGAGTATCAAGCACGGATGGCGACGCGGAGGATCTGGAGGATGATGAGCCACCGGTGTCAGCACCACCATCTAACAAT
CCAAAAAGTTTGCGTCTGCATCTATTCCCGTATGAGATGTTCTAAGCTCACATTTAAATGACCTAGGTCGTAAGACAAAA
GTTGAAAAAAAACGTTGGAAAATAGTTTCAAAATAAGGTTTAGACCAAAAAGGTTTATAACTATATTAACATATGAATCG
GACAAATGTTAAGATAATGGAATAGCAAAAATTGTATATAACACCAGATATGAATAACTTAATTAATTTCTCTTGGTCGT
TTAAGTCGCTTTTTAAGATTTTTAACTTCCAGTTTTGTGCTTAGTCCCGATCAATTCTTATTATGTAC
        Other Products of this Gene
        Other Transcripts
        Name
        FlyBase ID
        Length (nt)
        Nhe2-RB
        FBtr0081467
        4794
        Nhe2-RC
        FBtr0299908
        4578
        Nhe2-RD
        FBtr0299909
        2838
        Nhe2-RE
        FBtr0299910
        4602
        Nhe2-RF
        FBtr0299911
        2741
        Nhe2-RG
        FBtr0299912
        6233
        Nhe2-RH
        FBtr0306015
        5898
        Nhe2-RI
        FBtr0306016
        6466
        Nhe2-RJ
        FBtr0334171
        4432
        Nhe2-RK
        FBtr0334172
        4792
        Nhe2-RL
        FBtr0334173
        4686
        Polypeptides
        Derived from THIS transcript
        Name
        FlyBase ID
        Length (aa)
        Nhe2-PA
        FBpp0080995
        1291
        Derived from OTHER transcripts
        Name
        FlyBase ID
        Length (aa)
        Nhe2-PB
        FBpp0080996
        1291
        Nhe2-PC
        FBpp0289186
        1219
        Nhe2-PD
        FBpp0289187
        672
        Nhe2-PE
        FBpp0289188
        1229
        Nhe2-PF
        FBpp0289189
        723
        Nhe2-PG
        FBpp0289190
        1322
        Nhe2-PH
        FBpp0297157
        1222
        Nhe2-PI
        FBpp0297158
        1166
        Nhe2-PJ
        FBpp0306288
        1305
        Nhe2-PK
        FBpp0306289
        1177
        Nhe2-PL
        FBpp0306290
        1257
        Comments

        Dicistronic transcript (potential); alternative monocistronic transcript(s) exist.

        External Crossreferences and Linkouts ( 1 )
        Crossreferences
        RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
        Synonyms and Secondary IDs (2)
        Reported As
        Symbol Synonym
        CG9256-RA
        (FlyBase, 1996-)
        Nhe2-RA
        (FlyBase, 1996-)
        Secondary FlyBase IDs
          References (2)