FB2026_02 , released June 18, 2026
Transcript: Dmel\Ca-α1D-RJ
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General Information
Symbol
Dmel\Ca-α1D-RJ
Species
D. melanogaster
Annotation Symbol
CG4894-RJ
FlyBase ID
FBtr0332025
Feature type
Associated gene
Evidence Rank
Length (nt)
8450
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 19 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        End(s) extend beyond the annotated transcript, internally consistent
          Sequence
          GTTCTCGGCTGATCGTTGGCGTGAATTGGTTTGGTTCGGTTCCCGCGCCAGCGACCGTGTGTGTTCAGATTTATTTTTAA
          GCTGTACGCAGAAAATTCTTTTTCTGGTCGTAATAGTAGTAACTATTATTTAAGGAGGTTGGCAGATTCGCAGCCCAACG
          AATGATATGTACTAGCAGTCGAGAAGATATCTCCCAAAAAGTTTAAAAATATTAACGCCACGTATGCTGCCGTTGGATTT
          TTGGCTCGGATTTTCGTACGCACGACTGCTTCTCAACAAATAAAAATCGCAGCGTGTTTTTATTGTTGCCACGCGAGGGA
          ATCGCCGAGGGATCAGCTTCTGCAGTGCACTTGATCCGCCCGAGGATTCGAATCAGCCCAGCGGGACCAGGAGGCGACCC
          ACCAGCACCGAGCTCGCCCTCAGCAACGTCACCAGTCAGATTGTGAACAATGCCACCTACAAGCTAGACTTCAAGCAACG
          TCGTCACAAAAGCAACAACGGAGGCAGTGAGTCAGGATCTCTAACCGGAATAGCCACAGGACCGGCGACAAGTCCCGCAG
          GACCAACAGGACCAACCAGTTCCAGCGGCAAGCGGCGCAAGTCCAGTTGCACATCCTGCGGCGGAGGTGGCATCAGTGCC
          CCACCCCCGAGACTAACGCCCGAGGAGGCGTGGCAACTGCAACCACAGAACAGTGTTACCAGTGCCGGCAGCACAAATAG
          TAGTTTCAGCAGCGGCGGCGGACGTGACGATAATAGTAGTTACAGTGCCGTCGGCGGCGATAGCAGCAGCAGCAATAGTT
          GCAACTGCGATATCACCGGTGATAACAGTACATTGCATGGTTTTGGCGTCGGCGACGTTTGTAGTTTCATCGCCGATTGT
          GACGACAATAGCGAGGACGACGACGGCGATCCGAATAACCAGGATCTCAGCTCGCAAACCCTGCGCACAGCGGCCATCGT
          AGCGGCAGTTGCGGCAGCAGCCAAGGAACAGGCCCAGGAGCAATCGCTCGCCGACTGCGAGAGCTTCAGCGATCGCCGGC
          AGGATGCCGATGAGGACGTCCGCATCATTCAGGATTGCTGCGGCGGCAACAACGACTCACTCGAAGACGTTGGCGAGGTG
          GACGACAACGCCGACGTTGTCGTGAGAAAGAACTCAAGGAATCGTCCCTCGATCAGAAGGACATGCAGGATAACCGAGGA
          GGACGACGACGAAGACGAGAACGCGGACTACGGTGATTTCGATCGGGAGGATCAAGAGCTAGACGACGAGGAGCCCGAGG
          GCACCACCATTGACATTGATGAGCAGGAACAGCAGCACGACCAAGGTGATTCCGCTGAAGAGGAAGACGACGACGAGGAC
          GTCGACGAGTACTTTGAGGAGGAGGAGGACGACACGCAGGCCTTTTCGCCATTCTACTCCAGTTCCGCGGAGCTAATTGA
          TAATTTTGGTGGCGGTGCGGGCAAGTTCTTCAACATAATGGACTTCGAGCGTGGAGCCTCCGGCGAGGGAGGCTTTTCGC
          CAAACGGCAACGGTGGTCCCGGCAGCGGTGATGTTTCCCGTACGGCGAGATACGACTCCGGGGAGGGGGATCTGGGCGGC
          GGCAACAATATCATGGGCATCGATTCTATGGGCATTGCAAACATTCCGGAAACCATGAACGGCACCACAATTGGACCAAG
          TGGAGCTGGTGGCCAAAAAGGTGGTGCTGCTGCAGGTGCCGCTGGCCAAAAGAGACAACAACGCCGTGGAAAACCGCAAC
          CAGACAGACCACAACGAGCATTATTTTGCCTGAGCGTCAAGAATCCCCTGCGAGCCCTGTGCATTCGCATTGTGGAGTGG
          AAACCATTTGAGTTCCTTATTTTGTTAACCATTTTTGCCAACTGTATTGCCTTGGCTGTTTACACCCCCTATCCGGGAAG
          CGATTCAAACGTGACGAATCAAACCTTGGAAAAAGTTGAATATGTATTCCTAGTTATATTCACAGCGGAATGTGTTATGA
          AAATTTTAGCATATGGTTTTGTGTTACATAATGGTGCATATCTAAGAAATGGATGGAATTTATTAGATTTTACAATTGTA
          GTTATAGGGGCGATAAGTACTGCACTCTCCCAATTGATGAAGGACGCCTTTGATGTTAAGGCCTTACGTGCCTTTCGAGT
          GCTACGTCCACTGCGACTTGTATCGGGTGTACCAAGTCTACAGGTTGTGCTGAATTCAATTTTAAAGGCCATGGTGCCAC
          TGTTTCACATTGCACTCCTGGTCCTATTCGTAATCATAATCTATGCGATAATTGGCCTAGAGCTCTTCTCTGGCAAATTG
          CACAAGGCGTGTCGCGATGAGATCACAGGTGAATACGAGGAAAACATCCGGCCCTGCGGAGTGGGCTACCAGTGTCCGCC
          GGGCTACAAGTGCTACGGCGGATGGGATGGACCAAACGACGGCATCACCAACTTCGACAACTTTGGCCTGGCCATGTTGA
          CGGTGTTCCAGTGCGTCACCCTTGAGGGCTGGACTGATGTCCTTTATAGCATCCAAGATGCAATGGGCAGCGATTGGCAG
          TGGATGTACTTCATTTCCATGGTTATCCTGGGTGCCTTCTTCGTGATGAATCTGATTCTCGGTGTGTTGTCCGGTGAGTT
          CTCCAAGGAGCGTAACAAGGCCAAAAACCGCGGCGACTTCCAGAAGCTGCGCGAGAAGCAGCAGATCGAAGAGGATCTGC
          GGGGCTATCTCGATTGGATTACCCAAGCCGAGGACATTGAACCAGACGCCGTGGGAGGTCTGATATCCGATGGCAAGGGC
          AAGCAGCCCAACGAAATGGATTCCACCGAGAATCTGGGCGAAGAAATGCCCGAGGTCCAAATGACTGAATCACGATGGCG
          CAAAATGAAGAAGGACTTCGATCGAGTCAATCGTCGAATGCGAAGAGCCTGTCGCAAGGCAGTCAAGTCGCAGGCCTTCT
          ATTGGCTCATCATCGTTTTGGTGTTTCTCAATACGGGTGTCTTGGCCACGGAACATTATGGCCAACTTGATTGGCTAGAT
          AACTTCCAGGAGTACACCAACGTGTTCTTCATCGGACTGTTCACCTGCGAAATGTTGTTGAAGATGTACAGCTTGGGCTT
          TCAGGGCTACTTCGTTTCGCTGTTCAATCGTTTTGATTGTTTTGTGGTGATTGGCAGCATTACGGAAACCCTACTAACGA
          ATACGGGAATGATGCCGCCATTGGGTGTCTCCGTGCTGCGTTGTGTACGTCTCCTGAGAGTCTTTAAAGTAACTAAATAC
          TGGCGGTCTCTCTCAAATCTCGTCGCTTCCCTATTGAACTCTATACAATCGATTGCTTCACTTTTGTTACTGCTCTTCCT
          ATTTATTGTGATATTTGCTCTGCTGGGCATGCAAGTTTTTGGCGGTAAATTTAATTTTGATGGCAAAGAGGAGAAGTATC
          GAATGAACTTCGACTGCTTCTGGCAGGCTCTACTCACAGTGTTTCAGATCATGACTGGCGAGGATTGGAATGCTGTGATG
          TATGTGGGCATCAATGCCTATGGCGGTGTGTCCTCCTATGGTGCCTTGGCCTGTATTTACTTTATTATTTTGTTCATATG
          CGGTAACTACATCCTGCTAAACGTGTTCTTGGCCATTGCTGTGGATAATTTGGCCGATGCCGACTCGCTCTCTGAGGTCG
          AAAAAGAAGAGGAACCTCACGATGAATCTGCTCAGAAAAAGTCACATAGTCCGACTCCAACAATTGATGGCATGGATGAT
          CACCTCAGCATAGATATCGATATGGAGCAACAGGAACTGGATGACGAAGACAAAATGGACCATGAAACATTATCAGACGA
          GGAAGTTCGTGAAATGTGCGAGGAGGAAGAGGAAGTGGATGAAGAAGGCATGATTACAGCACGACCCCGACGTATGTCTG
          AGGTTAATACGGCAACGAAAATTCTACCCATACCGCCGGGCACATCATTTTTTCTTTTCTCACAAACGAACAGATTTCGC
          GTCTTCTGCCACTGGCTTTGCAATCACAGCAATTTCGGCAACATTATCCTGTGTTGCATTATGTTTTCATCGGCTATGTT
          GGCAGCAGAGAATCCTCTGAGAGCCAATGATGACCTGAATAAAGTGCTCAATAAATTTGATTATTTTTTCACGGCAGTTT
          TCACAATAGAACTGATTCTGAAATTGATTTCATACGGCTTCGTATTACACGACGGAGCCTTTTGCAGATCCGCATTTAAT
          CTATTAGATTTACTTGTGGTCTGCGTGTCATTGATTTCTCTAGTGTCCAGTTCGAATGCGATTTCAGTCGTGAAAATTCT
          ACGTGTGCTCCGTGTTTTAAGGCCACTCAGAGCCATTAATCGTGCCAAGGGACTGAAGCATGTTGTTCAATGTGTCATAG
          TCGCTGTTAAGACTATCGGAAATATTGTGCTCGTCACATGCCTACTGCAGTTCATGTTTGCCGTAATAGGAGTCCAATTG
          TTTAAGTATGTGGTCAAATGCGTTGTAGTCGCAATCAAAACCATTGGTAATATCATGTTGGTGACATATTTGTTACAATT
          CATGTTCGCTGTTATTGGAGTACAACTCTTTAAGGGCAAATTTTTCAAGTGCACTGATGGTTCCAAAATGACTCAAGATG
          AATGCTACGGAACCTATCTGGTCTATGATGATGGCGATGTTCATAAGCCGCGACTCAGGGAACGGGAATGGAGTAACAAT
          CGCTTCCACTTCGATGATGTGGCCAAGGGCATGTTGACTTTGTTCACGGTGTCCACATTTGAGGGCTGGCCAGGTTTGCT
          GTATGTTTCAATTGATTCGAATAAGGAAAACGGCGGTCCAATACACAACTTCCGTCCGATCGTAGCTGCCTACTATATAA
          TCTACATTATTATTATTGCCTTCTTCATGGTGAACATATTCGTCGGTTTCGTTATCGTCACTTTCCAAAATGAGGGTGAA
          CAGGAATATAAGAATTGTGATCTGGATAAGAATCAGCGCAATTGCATAGAATTTGCCTTGAAAGCGAAACCCGTTAGACG
          CTATATACCAAAGCATGGTATACAATATAAGGTCTGGTGGTTCGTCACGTCGTCATCCTTCGAGTACACAATATTCATAC
          TGATCATGATAAACACGGTAACGCTGGCTATGAAGTTTTACAATCAGCCGCTGTGGTACACGGAACTTTTAGATGCCTTA
          AATATGATATTTACGGCGGTGTTTGCTTTGGAATTTGTCTTTAAATTAGCCGCGTTTCGATTTAAGAACTACTTTGGAGA
          TGCTTGGAACGTATTCGATTTTATCATCGTTTTAGGCAGTTTCATAGACATTGTCTACTCTGAAATTAAGAGCAAGGATA
          CTTCTCAGATAGCAGAATGTGACATAGTAGAGGGCTGCAAATCCACCAAGAAATCAGCTGGTTCAAATTTAATATCCATC
          AATTTCTTCCGACTGTTCCGAGTTATGCGACTCGTCAAGCTTCTCAGCAAAGGCGAAGGCATTCGAACATTACTGTGGAC
          TTTTATCAAATCCTTCCAGGCACTGCCCTACGTAGCCCTGCTAATTGTGCTTCTATTTTTCATTTATGCGGTTGTGGGGA
          TGCAAGTGTTCGGCAAAATTGCTCTAGATGGTGGAAACGCCATCACGGCCAATAACAATTTCCAAACGTTCCAGCAGGCT
          GTTTTAGTACTCTTCCGATCGGCCACCGGAGAAGCTTGGCAGGAAATTATGATGTCCTGCTCGGCGCAACCGGATGTGAA
          GTGCGATATGAATTCAGATACGCCGGGAGAACCATGCGGTTCCTCAATAGCCTATCCGTACTTTATTTCCTTCTATGTTC
          TCTGCTCGTTTTTGATTATTAATCTTTTCGTGGCCGTCATTATGGACAACTTTGACTATCTGACTCGTGATTGGTCGATT
          TTGGGTCCCCACCACCTGGACGAGTTTATTCGCCTTTGGAGCGAATACGATCCGGATGCAAAGGGACGCATCAAACACTT
          GGATGTGGTCACATTGCTGAGAAAGATCTCCCCACCACTTGGCTTCGGCAAACTGTGTCCACATAGAATGGCCTGCAAGC
          GACTGGTTTCCATGAACATGCCTCTTAACTCAGATGGAACGGTTCTCTTCAATGCCACACTGTTTGCTGTGGTCCGCACT
          TCGCTGAGCATCAAAACTGACGGTAATATCGATGATGCCAACTCCGAGCTGCGCGCCACTATCAAGCAGATCTGGAAGCG
          TACCAATCCGAAGCTTCTGGATCAGGTTGTACCACCGCCGGGCAACGATGACGAGGTGACCGTCGGCAAGTTCTACGCCA
          CATATCTAATTCAGGACTACTTCCGGCGCTTCAAGAAGCGCAAGGAACAGGAGGGCAAGGAGGGTCATCCGGACAGCAAT
          ACAGTCACGCTGCAGGCCGGCTTGCGAACCCTACACGAAGTGTCCCCAGCTCTAAAGAGAGCCATCTCCGGCAATCTCGA
          CGAGCTGGACCAGGAGCCGGAGCCCATGCATCGTCGTCATCATACGCTTTTCGGCAGCGTGTGGTCATCGATCCGCCGAC
          ATGGAAACGGAACCTTCAGGCGAAGTGCCAAGGCAACTGCTTCGCAGAGCAACGGAGCCTTGGCGATCGGTGGATCAGCG
          TCCGCGGCCTTGGGTGTGGGCGGTAGCTCGCTGGTCCTGGGAAGCAGCGATCCCGCTGGCGGGGATTATCTGTACGACAC
          TCTGAACCGCAGCGTAGCCGACGGAGTGAACAATATAACGCGGAACATAATGCAGGCCCGTTTGGCGGCAGCCGGAAAGC
          TGCAGGACGAACTGCAGGGGGCAGGAAGTGGCGGAGAGCTAAGGACATTCGGCGAGAGCATATCCATGCGACCGCTGGCC
          AAAAATGGAGGCGGAGCGGCCACTGTGGCCGGAACACTGCCGCCTGAGGCGAATGCCATTAACTATGACAACCGCAATCG
          TGGTATTTTATTGCATCCATATAACAATGTCTACGCACCCAATGGTGCTCTTCCTGGCCACGAACGCATGATCCAATCGA
          CACCAGCTAGTCCCTACGATCAGCGTCGTTTACCAACTTCATCTGATATGAACGGTCTAGCCGAATCATTGATTGGAGGG
          GTACTCGCCGCTGAGGGATTGGGTAAATACTGCGACTCCGAGTTCGTGGGGACTGCTGCACGGGAGATGCGCGAGGCGCT
          GGACATGACGCCCGAGGAAATGAACCTGGCCGCCCACCAGATCCTCTCTAACGAGCACTCGCTGAGTCTGATCGGCAGTA
          GCAATGGTAGCATCTTCGGTGGATCCGCCGGTGGCCTGGGAGGGGCTGGATCTGGAGGTGTGGGTGGATTGGGCGGTAGT
          AGCAGCATTCGCAACGCTTTCGGCGGAAGCGGAAGTGGACCGTCCTCACTGTCGCCGCAACATCAGCCTTACTCGGGCAC
          TCTGAACTCACCACCGATTCCGGATAATCGTCTGAGACGTGTTGCCACAGTCACGACCACAAACAATAACAATAAGTCCC
          AAGTTAGCCAAAACAATTCGAATAGCTTAAATGTTAGGGCTAATGCCAATAGCCAAATGAACATGTCACCAACTGGACAA
          CCAGTGCAGCAACAATCGCCGCTAAGAGGACAGGGCAATCAGACTTACTCCTCATAGCACCCACATTGTAAGCTATACAT
          ACAGAATGTCTTCTTGATGGAACTTTAAGTGTGCATTCAGCGCAAGCTGAGGTTTATTGGCTAATTTATTTGTTATTTTT
          AGCGAAGAAAAACACATTAGTCTTAGCATCGGGAATTGTTATATTTGAATTGTTCGCACACACACAAGCGGGAACCAAAC
          CAACAAAACTTGTATAACTTGTATAAAGAAAATCAGCTAATTGTATATGTATAAATATATTAATGTTTTTGCCTTTTTGA
          GAAATCTATCGTGGGCCTTCGTCCTCTAACGAGCCAGAAAACCAAAAAACCAACAACACTAAACTGAACAAATTAAGGAA
          AAATGTATATTTTTGGATAAAAAAAAAAAAGAAAAGAGGAAACCAACCTAAACTGATAACGTTTAACTTCTAATTAGAAA
          TATAGATCAAAACCAAAAATATATAAATAAAAACCACACCAATATAATTGATTAGGTAATAATCACCAAAACGGAAATGA
          AATAATTATACATTAACATTGAACATTACATTATTGAGAGCGACAGTGTAATTACCTATTTCGATTTAGACGCATTTTAT
          TTTTTAAGTATTTAAAATATGAACAATTTACGATAAAAGGAATTGTTTACTATATATGTAGCAGACATACATATATGTAT
          AAAATTCATAAATGTAATAGCATAATTTCAAACTGAACGAGAGTCCCAAGCCCCTTAAAAAGTAATGTAAACTGAATTTT
          AATTGTTATGATTGAATTTTTACAATAAAACCGAGAAAATGTGAGAAAAT
          
          Other Products of this Gene
          Other Transcripts
          Name
          FlyBase ID
          Length (nt)
          FBtr0332021
          7881
          FBtr0332022
          8226
          FBtr0332023
          7881
          FBtr0332024
          7890
          FBtr0479784
          9425
          FBtr0479785
          8973
          FBtr0479786
          8986
          FBtr0479787
          9298
          FBtr0479788
          8968
          Polypeptides
          Derived from THIS transcript
          Name
          FlyBase ID
          Length (aa)
          FBpp0304341
          2059
          Derived from OTHER transcripts
          Name
          FlyBase ID
          Length (aa)
          FBpp0304337
          2023
          FBpp0304338
          1799
          FBpp0304339
          2023
          FBpp0304340
          2026
          FBpp0428117
          2669
          FBpp0428118
          2672
          FBpp0428119
          2705
          FBpp0428120
          2453
          FBpp0428121
          2699
          Comments

          Extended 3' UTR based on EST and RNA-Seq data.

          Transcriptional initiation is supported by short-capped RNA data (FBrf0209722).

          External Crossreferences and Linkouts ( 1 )
          Crossreferences
          RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
          Synonyms and Secondary IDs (1)
          Reported As
          Symbol Synonym
          Ca-α1D-RJ
          Secondary FlyBase IDs
            References (0)