FB2026_02 , released June 18, 2026
Transcript: Dmel\Ca-α1D-RN
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General Information
Symbol
Dmel\Ca-α1D-RN
Species
D. melanogaster
Annotation Symbol
CG4894-RN
FlyBase ID
FBtr0479787
Feature type
Associated gene
Evidence Rank
Length (nt)
9298
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 20 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
    End(s) extend beyond the annotated transcript, internally consistent
      cDNA Clones, End Sequence Only (ESTs)
      End(s) extend beyond the annotated transcript, internally consistent
        Sequence
        GTGTGCTTTTGTGGCTGATTCCTTAAACTTGTTCGCGTTGCTGATGGTCGCGTGTGAAAAATACAATAAAATACAACACT
        GAAAAGCCAGGAAAATCAAACGAACCAAGGCAATAATATCGAAATTTGTCCTGTTGTAAAACCACATTATGCTTCAGATC
        TTCAATCCTCAAAACGACTCTCCACTGCAGACTAACAAACAAATGCCAAATTTTTACAATCCGCCGCTCTAAACTCGTCC
        AAACTAAAAACCAAAAAAACCAAACTAAAAAATACAAAAAAAAATCTAAGTCACCACCGTCGAATTTCTACAACTATTAA
        ACCATTTTCTAAATACAAAACAAAAAGCTTTTCGCTTATTTAAGTGAGTCTGATTAAAATGTGCATGTCTGTGTGGCGAC
        TGAGACCAAACACACCTGTTGCTGCGATGCTTTGACCGCGTTTCGCTTTTTGGCTTTTGGCAAGGAAAACGCTCAACGAA
        TAAGGCATTTTAAAGGAAAGGCAATAAATATTGTGCGTCCGAATGAAACTTCAAATATGAATACAGGAGATCGTAAGGAG
        CAAGCCTCGTTAACACCGCAACAGCAACAATCGCCGCAGCAGCCAGAGCAACAGCAACCAATTACCCGACACGATGCCTT
        GGATAGTTCTAGTGCTAACAATAAACTAAATCATAAACACAATAACGATAAGGATAAGGATACCACTAGCGATAAGAACT
        GGGAGGCGGGCAGAGATTTATTGCCGGCCAGTGTTGTCATCGTCGATGAATCATGTGCCTCGAAAAGTCAGAAACAACCA
        ATCGAGCCGAGCATTGTTTCGCGAAGTGGAGCCACCTCCTCATCGCAACGTCGCCGGCAATTGCAATTCCAGCGACAAAA
        GGAGGCCAAACTTTATGACCGCGGAGATGGGGATCGGGACCGCGAACGGGAGCGGGAAGCCTCGACCTCGACCTCAACCT
        CGACCTCCGCCTCCACCACCACCACGAATACTGTGATGGGTGGCGGGGAGCTGGTGAACTGTATAGCCTACGATGACAAC
        ACCCTGGTCATCGAGAGGAAACCCTCGCCCTCCTCCCCGTCCACCAGCCGGCGTTATCTGAAGGCCGAAACGCCGACGCG
        TGGCAGTCGAAAGTACAACCGCAAGTCATCGGCTAAAAGTGATTTGGAAGTGGTCGTTGTCAAGCCGGAACACCATCATC
        AGCATCGATCTCCGACGATAACGCTTCCGGTTCCGGCTAACCCACTAACCACATCGGCATCGGCGGGATCCTCGCCCACG
        GGAGCGGGATTGGCAGCCGGATTGGGAACTGCCTCGGGAACGGTCCTGCAACAAAGCTGCAGTGCACTTGATCCGCCCGA
        GGATTCGAATCAGCCCAGCGGGACCAGGAGGCGACCCACCAGCACCGAGCTCGCCCTCAGCAACGTCACCAGTCAGATTG
        TGAACAATGCCACCTACAAGCTAGACTTCAAGCAACGTCGTCACAAAAGCAACAACGGAGGCAGTGAGTCAGGATCTCTA
        ACCGGAATAGCCACAGGACCGGCGACAAGTCCCGCAGGACCAACAGGACCAACCAGTTCCAGCGGCAAGCGGCGCAAGTC
        CAGTTGCACATCCTGCGGCGGAGGTGGCATCAGTGCCCCACCCCCGAGACTAACGCCCGAGGAGGCGTGGCAACTGCAAC
        CACAGAACAGTGTTACCAGTGCCGGCAGCACAAATAGTAGTTTCAGCAGCGGCGGCGGACGTGACGATAATAGTAGTTAC
        AGTGCCGTCGGCGGCGATAGCAGCAGCAGCAATAGTTGCAACTGCGATATCACCGGTGATAACAGTACATTGCATGGTTT
        TGGCGTCGGCGACGTTTGTAGTTTCATCGCCGATTGTGACGACAATAGCGAGGACGACGACGGCGATCCGAATAACCAGG
        ATCTCAGCTCGCAAACCCTGCGCACAGCGGCCATCGTAGCGGCAGTTGCGGCAGCAGCCAAGGAACAGGCCCAGGAGCAA
        TCGCTCGCCGACTGCGAGAGCTTCAGCGATCGCCGGCAGGATGCCGATGAGGACGTCCGCATCATTCAGGATTGCTGCGG
        CGGCAACAACGACTCACTCGAAGACGTTGGCGAGGTGGACGACAACGCCGACGTTGTCGTGAGAAAGAACTCAAGGAATC
        GTCCCTCGATCAGAAGGACATGCAGGATAACCGAGGAGGACGACGACGAAGACGAGAACGCGGACTACGGTGATTTCGAT
        CGGGAGGATCAAGAGCTAGACGACGAGGAGCCCGAGGGCACCACCATTGACATTGATGAGCAGGAACAGCAGCACGACCA
        AGGTGATTCCGCTGAAGAGGAAGACGACGACGAGGACGTCGACGAGTACTTTGAGGAGGAGGAGGACGACACGCAGGCCT
        TTTCGCCATTCTACTCCAGTTCCGCGGAGCTAATTGATAATTTTGGTGGCGGTGCGGGCAAGTTCTTCAACATAATGGAC
        TTCGAGCGTGGAGCCTCCGGCGAGGGAGGCTTTTCGCCAAACGGCAACGGTGGTCCCGGCAGCGGTGATGTTTCCCGTAC
        GGCGAGATACGACTCCGGGGAGGGGGATCTGGGCGGCGGCAACAATATCATGGGCATCGATTCTATGGGCATTGCAAACA
        TTCCGGAAACCATGAACGGCACCACAATTGGACCAAGTGGAGCTGGTGGCCAAAAAGGTGGTGCTGCTGCAGGTGCCGCT
        GGCCAAAAGAGACAACAACGCCGTGGAAAACCGCAACCAGACAGACCACAACGAGCATTATTTTGCCTGAGCGTCAAGAA
        TCCCCTGCGAGCCCTGTGCATTCGCATTGTGGAGTGGAAACCATTTGAGTTCCTTATTTTGTTAACCATTTTTGCCAACT
        GTATTGCCTTGGCTGTTTACACCCCCTATCCGGGAAGCGATTCAAACGTGACGAATCAAACCTTGGAAAAAGTTGAATAT
        GTATTCCTAGTTATATTCACAGCGGAATGTGTTATGAAAATTTTAGCATATGGTTTTGTGTTACATAATGGTGCATATCT
        AAGAAATGGATGGAATTTATTAGATTTTACAATTGTAGTTATAGGGGCGATAAGTACTGCACTCTCCCAATTGATGAAGG
        ACGCCTTTGATGTTAAGGCCTTACGTGCCTTTCGAGTGCTACGTCCACTGCGACTTGTATCGGGTGTACCAAGTCTACAG
        GTTGTGCTGAATTCAATTTTAAAGGCCATGGTGCCACTGTTTCACATTGCACTCCTGGTCCTATTCGTAATCATAATCTA
        TGCGATAATTGGCCTAGAGCTCTTCTCTGGCAAATTGCACAAGGCGTGTCGCGATGAGATCACAGGTGAATACGAGGAAA
        ACATCCGGCCCTGCGGAGTGGGCTACCAGTGTCCGCCGGGCTACAAGTGCTACGGCGGATGGGATGGACCAAACGACGGC
        ATCACCAACTTCGACAACTTTGGCCTGGCCATGTTGACGGTGTTCCAGTGCGTCACCCTTGAGGGCTGGACTGATGTCCT
        TTATAGCATCCAAGATGCAATGGGCAGCGATTGGCAGTGGATGTACTTCATTTCCATGGTTATCCTGGGTGCCTTCTTCG
        TGATGAATCTGATTCTCGGTGTGTTGTCCGGTGAGTTCTCCAAGGAGCGTAACAAGGCCAAAAACCGCGGCGACTTCCAG
        AAGCTGCGCGAGAAGCAGCAGATCGAAGAGGATCTGCGGGGCTATCTCGATTGGATTACCCAAGCCGAGGACATTGAACC
        AGACGCCGTGGGAGGTCTGATATCCGATGGCAAGGGCAAGCAGCCCAACGAAATGGATTCCACCGAGAATCTGGGCGAAG
        AAATGCCCGAGGTCCAAATGACTGAATCACGATGGCGCAAAATGAAGAAGGACTTCGATCGAGTCAATCGTCGAATGCGA
        AGAGCCTGTCGCAAGGCAGTCAAGTCGCAGGCCTTCTATTGGCTCATCATCGTTTTGGTGTTTCTCAATACGGGTGTCTT
        GGCCACGGAACATTATGGCCAACTTGATTGGCTAGATAACTTCCAGGAGTACACCAACGTGTTCTTCATCGGACTGTTCA
        CCTGCGAAATGTTGTTGAAGATGTACAGCTTGGGCTTTCAGGGCTACTTCGTTTCGCTGTTCAATCGTTTTGATTGTTTT
        GTGGTGATTGGCAGCATTACGGAAACCCTACTAACGAATACGGGAATGATGCCGCCATTGGGTGTCTCCGTGCTGCGTTG
        TGTACGTCTCCTGAGAGTCTTTAAAGTAACTAAATACTGGCGGTCTCTCTCAAATCTCGTCGCTTCCCTATTGAACTCTA
        TACAATCGATTGCTTCACTTTTGTTACTGCTCTTCCTATTTATTGTGATATTTGCTCTGCTGGGCATGCAAGTTTTTGGC
        GGTAAATTTAATTTTGATGGCAAAGAGGAGAAGTATCGAATGAACTTCGACTGCTTCTGGCAGGCTCTACTCACAGTGTT
        TCAGATCATGACTGGCGAGGATTGGAATGCTGTGATGTATGTGGGCATCAATGCCTATGGCGGTGTGTCCTCCTATGGTG
        CCTTGGCCTGTATTTACTTTATTATTTTGTTCATATGCGGTAACTACATCCTGCTAAACGTGTTCTTGGCCATTGCTGTG
        GATAATTTGGCCGATGCCGACTCGCTCTCTGAGGTCGAAAAAGAAGAGGAACCTCACGATGAATCTGCTCAGAAAAAGTC
        ACATAGTCCGACTCCAACAATTGATGGCATGGATGATCACCTCAGCATAGATATCGATATGGAGCAACAGGAACTGGATG
        ACGAAGACAAAATGGACCATGAAACATTATCAGACGAGGAAGTTCGTGAAATGTGCGAGGAGGAAGAGGAAGTGGATGAA
        GAAGGCATGATTACAGCACGACCCCGACGTATGTCTGAGGTTAATACGGCAACGAAAATTCTACCCATACCGCCGGGCAC
        ATCATTTTTTCTTTTCTCACAAACGAACAGATTTCGCGTCTTCTGCCACTGGCTTTGCAATCACAGCAATTTCGGCAACA
        TTATCCTGTGTTGCATTATGTTTTCATCGGCTATGTTGGCAGCAGAGAATCCTCTGAGAGCCAATGATGACCTGAATAAA
        GTGCTCAATAAATTTGATTATTTTTTCACGGCAGTTTTCACAATAGAACTGATTCTGAAATTGATTTCATACGGCTTCGT
        ATTACACGACGGAGCCTTTTGCAGATCCGCATTTAATCTATTAGATTTACTTGTGGTCTGCGTGTCATTGATTTCTCTAG
        TGTCCAGTTCGAATGCGATTTCAGTCGTGAAAATTCTACGTGTGCTCCGTGTTTTAAGGCCACTCAGAGCCATTAATCGT
        GCCAAGGGACTGAAGCATGTTGTTCAATGTGTCATAGTCGCTGTTAAGACTATCGGAAATATTGTGCTCGTCACATGCCT
        ACTGCAGTTCATGTTTGCCGTAATAGGAGTCCAATTGTTTAAGGGCAAATTTTTCAAGTGCACTGATGGTTCCAAAATGA
        CTCAAGATGAATGCTACGGAACCTATCTGGTCTATGATGATGGCGATGTTCATAAGCCGCGACTCAGGGAACGGGAATGG
        AGTAACAATCGCTTCCACTTCGATGATGTGGCCAAGGGCATGTTGACTTTGTTCACGGTGTCCACATTTGAGGGCTGGCC
        AGGTTTGCTGTATGTTTCAATTGATTCGAATAAGGAAAACGGCGGTCCAATACACAACTTCCGTCCGATCGTAGCTGCCT
        ACTATATAATCTACATTATTATTATTGCCTTCTTCATGGTGAACATATTCGTCGGTTTCGTTATCGTCACTTTCCAAAAT
        GAGGGTGAACAGGAATATAAGAATTGTGATCTGGATAAGAATCAGCGCAATTGCATAGAATTTGCCTTGAAAGCGAAACC
        CGTTAGACGCTATATACCAAAGCATGGTATACAATATAAGGTCTGGTGGTTCGTCACGTCGTCATCCTTCGAGTACACAA
        TATTCATACTGATCATGATAAACACGGTAACGCTGGCTATGAAGTTTTACAATCAGCCGCTGTGGTACACGGAACTTTTA
        GATGCCTTAAATATGATATTTACGGCGGTGTTTGCTTTGGAATTTGTCTTTAAATTAGCCGCGTTTCGATTTAAGAACTA
        CTTTGGAGATGCTTGGAACGTATTCGATTTTATCATCGTTTTAGGCAGTTTCATAGACATTGTCTACTCTGAAATTAAGA
        GCAAGGATACTTCTCAGATAGCAGAATGTGACATAGTAGAGGGCTGCAAATCCACCAAGAAATCAGCTGGTTCAAATTTA
        ATATCCATCAATTTCTTCCGACTGTTCCGAGTTATGCGACTCGTCAAGCTTCTCAGCAAAGGCGAAGGCATTCGAACATT
        ACTGTGGACTTTTATCAAATCCTTCCAGGCACTGCCCTACGTAGCCCTGCTAATTGTGCTTCTATTTTTCATTTATGCGG
        TTGTGGGGATGCAAGTGTTCGGCAAAATTGCTCTAGATGGTGGAAACGCCATCACGGCCAATAACAATTTCCAAACGTTC
        CAGCAGGCTGTTTTAGTACTCTTCCGATCGGCCACCGGAGAAGCTTGGCAGGAAATTATGATGTCCTGCTCGGCGCAACC
        GGATGTGAAGTGCGATATGAATTCAGATACGCCGGGAGAACCATGCGGTTCCTCAATAGCCTATCCGTACTTTATTTCCT
        TCTATGTTCTCTGCTCGTTTTTGATTATTAATCTTTTCGTGGCCGTCATTATGGACAACTTTGACTATCTGACTCGTGAT
        TGGTCGATTTTGGGTCCCCACCACCTGGACGAGTTTATTCGCCTTTGGAGCGAATACGATCCGGATGCAAAGGGACGCAT
        CAAACACTTGGATGTGGTCACATTGCTGAGAAAGATCTCCCCACCACTTGGCTTCGGCAAACTGTGTCCACATAGAATGG
        CCTGCAAGCGACTGGTTTCCATGAACATGCCTCTTAACTCAGATGGAACGGTTCTCTTCAATGCCACACTGTTTGCTGTG
        GTCCGCACTTCGCTGAGCATCAAAACTGACGGTAATATCGATGATGCCAACTCCGAGCTGCGCGCCACTATCAAGCAGAT
        CTGGAAGCGTACCAATCCGAAGCTTCTGGATCAGGTTGTACCACCGCCGGGCAACGATGACGAGGTGACCGTCGGCAAGT
        TCTACGCCACATATCTAATTCAGGACTACTTCCGGCGCTTCAAGAAGCGCAAGGAACAGGAGGGCAAGGAGGGTCATCCG
        GACAGCAATACAGTCACGCTGCAGGCCGGCTTGCGAACCCTACACGAAGTGTCCCCAGCTCTAAAGAGAGCCATCTCCGG
        CAATCTCGACGAGCTGGACCAGGAGCCGGAGCCCATGCATCGTCGTCATCATACGCTTTTCGGCAGCGTGTGGTCATCGA
        TCCGCCGACATGGAAACGGAACCTTCAGGCGAAGTGCCAAGGCAACTGCTTCGCAGAGCAACGGAGCCTTGGCGATCGGT
        GGATCAGCGTCCGCGGCCTTGGGTGTGGGCGGTAGCTCGCTGGTCCTGGGAAGCAGCGATCCCGCTGGCGGGGATTATCT
        GTACGACACTCTGAACCGCAGCGTAGCCGACGGAGTGAACAATATAACGCGGAACATAATGCAGGCCCGTTTGGCGGCAG
        CCGGAAAGCTGCAGGACGAACTGCAGGGGGCAGGAAGTGGCGGAGAGCTAAGGACATTCGGCGAGAGCATATCCATGCGA
        CCGCTGGCCAAAAATGGAGGCGGAGCGGCCACTGTGGCCGGAACACTGCCGCCTGAGGCGAATGCCATTAACTATGATCT
        ACGCACCCAATGGTGCTCTTCCTGGCCACGAACGCATGATCCAATCGACACCAGCTAGTCCCTACGATCAGCGTCGTTTA
        CCAACTTCATCTGATATGAACGGTCTAGCCGAATCATTGATTGGAGGGGTACTCGCCGCTGAGGGATTGGGTAAATACTG
        CGACTCCGAGTTCGTGGGGACTGCTGCACGGGAGATGCGCGAGGCGCTGGACATGACGCCCGAGGAAATGAACCTGGCCG
        CCCACCAGATCCTCTCTAACGAGCACTCGCTGAGTCTGATCGGCAGTAGCAATGGTAGCATCTTCGGTGGATCCGCCGGT
        GGCCTGGGAGGGGCTGGATCTGGAGGTGTGGGTGGATTGGGCGGTAGTAGCAGCATTCGCAACGCTTTCGGCGGAAGCGG
        AAGTGGACCGTCCTCACTGTCGCCGCAACATCAGCCTTACTCGGGCACTCTGAACTCACCACCGATTCCGGATAATCGTC
        TGAGACGTGTTGCCACAGTCACGACCACAAACAATAACAATAAGTCCCAAGTTAGCCAAAACAATTCGAATAGCTTAAAT
        GTTAGGGCTAATGCCAATAGCCAAATGAACATGTCACCAACTGGACAACCAGTGCAGCAACAATCGCCGCTAAGAGGACA
        GGGCAATCAGACTTACTCCTCATAGCACCCACATTGTAAGCTATACATACAGAATGTCTTCTTGATGGAACTTTAAGTGT
        GCATTCAGCGCAAGCTGAGGTTTATTGGCTAATTTATTTGTTATTTTTAGCGAAGAAAAACACATTAGTCTTAGCATCGG
        GAATTGTTATATTTGAATTGTTCGCACACACACAAGCGGGAACCAAACCAACAAAACTTGTATAACTTGTATAAAGAAAA
        TCAGCTAATTGTATATGTATAAATATATTAATGTTTTTGCCTTTTTGAGAAATCTATCGTGGGCCTTCGTCCTCTAACGA
        GCCAGAAAACCAAAAAACCAACAACACTAAACTGAACAAATTAAGGAAAAATGTATATTTTTGGATAAAAAAAAAAAAGA
        AAAGAGGAAACCAACCTAAACTGATAACGTTTAACTTCTAATTAGAAATATAGATCAAAACCAAAAATATATAAATAAAA
        ACCACACCAATATAATTGATTAGGTAATAATCACCAAAACGGAAATGAAATAATTATACATTAACATTGAACATTACATT
        ATTGAGAGCGACAGTGTAATTACCTATTTCGATTTAGACGCATTTTATTTTTTAAGTATTTAAAATATGAACAATTTACG
        ATAAAAGGAATTGTTTACTATATATGTAGCAGACATACATATATGTATAAAATTCATAAATGTAATAGCATAATTTCAAA
        CTGAACGAGAGTCCCAAGCCCCTTAAAAAGTAATGTAAACTGAATTTTAATTGTTATGATTGAATTTTTACAATAAAACC
        GAGAAAATGTGAGAAAAT
        
        Other Products of this Gene
        Other Transcripts
        Name
        FlyBase ID
        Length (nt)
        FBtr0332021
        7881
        FBtr0332022
        8226
        FBtr0332023
        7881
        FBtr0332024
        7890
        FBtr0332025
        8450
        FBtr0479784
        9425
        FBtr0479785
        8973
        FBtr0479786
        8986
        FBtr0479788
        8968
        Polypeptides
        Derived from THIS transcript
        Name
        FlyBase ID
        Length (aa)
        FBpp0428120
        2453
        Derived from OTHER transcripts
        Name
        FlyBase ID
        Length (aa)
        FBpp0304337
        2023
        FBpp0304338
        1799
        FBpp0304339
        2023
        FBpp0304340
        2026
        FBpp0304341
        2059
        FBpp0428117
        2669
        FBpp0428118
        2672
        FBpp0428119
        2705
        FBpp0428121
        2699
        Comments

        Transcriptional initiation is supported by short-capped RNA data (FBrf0209722).

        Extended 3' UTR based on RNA-Seq and/or EST data.

        Multiphase exon postulated: variable use of small exons; supported combination results in frameshift and premature stop in downstream exon.

        External Crossreferences and Linkouts ( 1 )
        Crossreferences
        RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
        Synonyms and Secondary IDs (1)
        Reported As
        Symbol Synonym
        Ca-α1D-RN
        Secondary FlyBase IDs
          References (0)