FB2026_02 , released June 18, 2026
FB2026_02 , released June 18, 2026
Transcript: Dmel\HDAC4-RJ
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General Information
Symbol
Dmel\HDAC4-RJ
Species
D. melanogaster
Annotation Symbol
CG1770-RJ
FlyBase ID
FBtr0333334
Feature type
mRNA
Associated gene
Dmel\HDAC4
Evidence Rank
Length (nt)
6248
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 26 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
      cDNA Clones, End Sequence Only (ESTs)
      Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        Sequence
        Sequence Downloader
        AGATATCGATGTGGTTCCAGCTCTAATAGTCGTGGATTTCGGAACATTAATTTGTATTTTTTGCGTCGCGTCGCCCCAGA
AAGTCCAATCCAACAGCAAATCGCGCGTTTTCCAAAGAACAACAACCCCGAAAAATTCGAAAATAATAATTTTCTTGTTT
TTTTTTTCTGTTTTCCTGCGGCAAAAATTCCAATTTTTTTCGTAACATCTAAACAACAACAACAAAAAAAGTGCGTGCGC
GTGCAGAAGCGAAAAAAACCGAATAAATTGTGGGCGAATCAACAAGCAAAAGAGAATGAGCGATGATGAGGAGAAGAGGC
AAAAAAAGCAGAGGCAGTTGTCGTAGTACTAGTACCAAAAAGAAACTGCGAAAACTGCTAAAGTGACAAAAACAACAACA
GCAAGTAACGAAAGAGAAAAGCAAAAGAAGATCTGCCATCAGAAGCCGGAAGCGATGAGCGATTGCTGCACATAACGCCG
GCCACTCTGACATTGGACTTCAAGCCCCATCCCGCCGTGGATATCGATCAGCAGATCATGGAGCTCAAGAAGAGCCAGGA
GCTGCAAAAGCAGCGGCTTATCAACTCGTTTCAGGAGCAATCGAAGCAAATGGAATTGGAGCATAAACTTCAATTGGAGC
ACAAGTATCAATTTGCGGTGAATTCACATGGCGCTTTCCAGGAATTGCGAAACGAGAGCATGGTGACAGCCGCCGCTGCT
GCGGTGGCTCAGGAGCAACATCGCCAACAGTTGCATCAACAGCAGCAGCAACATCAGCAGCAGCAGCAGCAGCAGCAACA
TCAACAGCAGCAGCAGCAGCAACAGGCACGCGGCAGGGATGGCATGAAACTCAAGCAGAACTGTAGTGCCAATGCCAGTC
CCGAGGTCAAACAGATTCTCAACTGCTTCATCCTGAGCAGAAAGTCCCAGGCGGCGGCATCGAATGGCACAACGACAACG
TCGCCCTACAGGAATCGCGGCGTGGTGAAGAGCTCCTCGGGCGAATCCCTCCCAGCTGGAACCGTGACCAGTGCGCATCC
GTACAAAATACCTCAGCCGCCACCCTCACTGCTCAAATATGAATCTGATTTTCCGCTGAGGAAGACAGCATCCGAACCGA
ACCTGCTGAAGATCCGGCTGAAGCAGAGCGTCATCGAGCGCAAGGCCCGCATCGGAGGACCGGCGGGAGCCCGGCGCCAC
GAACGACTCCTCCAGGCGGCGCAGCGTAGGCAGCAAAAGAACTCGGTTCTCACAAACTGCAACAGTACACCGGATTCTGG
ACCCAATTCACCGCCCTCGGCAGCTGCGTTGGCGGTGGGCGTGGTCGGTAGCCGTGGATCACCGACAAGTGCACCCATTC
AGGAGGAAAACGAGGAGGGCAGCCAATATCAGCCGGGCCAGAGGAGCAGCATCAACGATTTGCCATTGTTCAGTTCACCA
TCGCTGCCGAATATTTCGCTCGGGCGACCGCATTTACCCAACTCGGCGCAGGCGCATGCCCAGGTGAATGCCCAGGTTGC
TGCCCAGGCTCAGGCACAGGCCCAGGCACAGGCACAGGCGCATGCCATGTTCGCGGCACTGGCTGCCGCCCAGGGTGGCT
GCGGACAGCCGGGCTACTATAATCCACTGGGCATGGCATTCGTTGGCCGGCAACCAGCACCGCTGGCCATGATTCCGGCC
ACGGGGATAGCACCGCAGCAACCGTCGCCGGTGGTGCGCAGTGCATCGGCCACTTCGACATCGTCGTCGCAGGCCTCGCT
GGTGGGCGATGTGGCGCCACCGCAGGCTCATGCCGCCTCCACCATTCTGCCCTCGTCATCGTCCTACATGCAGCAACTGG
GCAGTGTGGCCGGTTCGGGTGTTAATCTCCATGCCGCCGCCGTTGCTGCAGCGGCAGCAGCAGCAGCCGCCGCCGGTTCA
CTGCCACCGACCAATAGCCATGGTCACGGACACGGTTCCCACGCACATCCACATCCACATGCCCATGGACACGGGCATGG
CCATGGCCATGGTATCTACGCTGGCCACCAGCACAATGTGCCCATAACGGACGCCCAGGTGGCGCAGGTGCATCTGCACA
AACAGGGCCATCGGCCGCTGGGACGAACGCAGTCGGCACCACTGCCCCTTGGACATCCGATGCTAACCGGAGCTGTGCAA
CTGAATGTGGTCCAAACGCACTACGAGAATAGTGAGGCGGAGCGCCAGGCGTACGAGCACCAGGTGGTGAACCAGAAAGT
CCGCCAGACCGTCCTGACTCGCAGCGGAGCTGCTGCAGCAGCCGCTGCTGCCGCCGGCGTGAGCGTGGTGCGTGAGGCAC
AGTTGAAGGAGGAGGATGACGACTCGGCCGCCGAGGTGATGGACCTCACAGATAAGAAAAAACCGCCGAAGACGGTGCTA
ACCAGCACGATAGCCACCAGTACGTCCCAGAATCTGCCCGAAGCTTTGGCGGCGGCGGCGGCGGCAGCCGCCTACCGTGC
CCCGCACAACGCGTCCAGTAACTCCGCCTCCGCCACAAAGTCCGGTATTAAGCTGCGGGACCAGGAGTATTTGCAACAGC
AGCGGGAGCAACTATTGCTCCTTCAGCAGGAGGAGGAACTGGCGAAGAGCCTAATGCGTCCGCTATCGCGAACGCTTAGC
AGTCCGCTGGTGCCGCTGGGGCCACATGGTCTTAGTCAGATTCCCGACACTGGACAACAGCCGGCACCGATAGCCACATC
CTCGTCGGCCGATCATATACCGCCCGTTAACCTCTCGCTGCCGCATCGCCAGCACCGCCAGCTAATGAGCACACTATACG
CCAGCCAATTGCGTAACCACCAGCCATCGGCGAGTGGTTCACCGCCGCACAAGGTCACCACCGGTTTGGCCTACGATCCG
CTTATGCTGAAGCATTCGTGTATTTGCGGAGACAATGCCCAGCATCCGGAGCACAGTGGTCGACTGCAGAGCGTGTGGGC
ACGGTTAAATGAAACGGATCTGGTGAAGCGTTGCGATCGCCTGCGCGCTCGCAAGGCGACACAGGAGGAGCTGCAGACTG
TGCACACCGAAGCGCATGCCATGCTCTTCGGTTCGAATCAGTGCCAGCTCAGCAGGCCCAAGTTGGAAAACACGTTGTCG
GCCAGCTTTGTGCGTTTGTCGTGCGGCGGCTTGGGTGTGGATCTGGATACCACGTGGAATGAGCACCATACGGCAACCGC
TGCACGAATGGCAGCCGGTTGTGTTATCGATTTGGCACTGAAGACGGCCAAGGGTGACCTGCGGAATGGCTTTGCCGTTG
TCCGGCCGCCGGGCCATCATGCGGAGGCCAATTTGGCCATGGGCTTTTGTTTCTTCAATTCGATAGCCATTGCGGCCAAG
CTGCTGCGTCAGCGGATGCCCGAGGTGCGGCGCATCCTGATCGTCGATTGGGATGTGCATCACGGCAATGGCACACAGCA
AGCATTCTACCAAAGTCCCGACATTCTATATCTTTCCATACATCGACACGATGACGGTAACTTCTTTCCCGGCACAGGTG
GACCCACAGAGTGCGGCTCCGGTGCTGGTCTCGGCTTTAACGTGAACATCTCATGGTCTGGGGCACTTAATCCGCCACTG
GGCGACGCCGAGTATATCGCTGCATTCCGTACCGTTGTGATGCCCATCGCGCGGAGCTTTAATCCGGACATTGTGCTGGT
ATCCTCCGGCTTCGATGCGGCCACCGGCCATCCGGCACCGCTGGGTGGCTACCATGTCTCTCCGGCCTGCTTTGGGTTCA
TGACCCGCGAACTCCTTCAGTTGGCCAACGGCAAAGTGGTGCTGGCCCTCGAGGGCGGCTACGATCTGGCCGCCATCTGT
GATTCCGCCCAGGAGTGTGTGCGGGCGCTGCTCGGCGATCCCGCTGCTCCCATTGCCAAGGCCGAGCTGGAGCGCCCGCC
TTGCCAGAATGCCATCAATACGCTCCAGAAGACGATAGCCATACAGCAAACGCATTGGCCCTGCGTGAGGATGCTGGAGC
ACACGGTTGGCTTGTCTGCGCTGGAGACGCTCAAGGTGGAGCACGACGAGTCCGAGACGATCAACGCCATGGCTGGCCTC
TCGATGCAGTCGATGCACAGAACTCTATCCCGCGATGATTCCGAGGAGCCGATGGATCAGGATGAAACCAAATAGAAGGC
GATGCAGACGTATATTGCGGAAGAGGAGGCGGTGGGCGTGGCGAGGTTTTTGTGGACCTGGTAGAGTGGGAATGGCAGGA
GGGGGCGTGGCCGCAAGCTGCTCAATGCACATTTAGTTATTTGTTGTAGTTGAATTGATTGTTGTTGCTGTTGTTGTTGT
GGCGCTCGCTTGCAATTGTTGTCGTTGTCATTGATCGTCTATAGCCACATCTATCTCTCTCACTCGATCGATTATAGCAT
CCCAATTCCCCGCCCCGCCAAAAAAAACAAAAAGAAGAGAAACATCGAAAATATAGGGGAACATGTCTAAAAGAAGCAGA
ACAGGGCCTAAAGTTCAAAATGGTGGCTGTGCCTCCAAAAGAAGAAATAATTATAATAATTAGAAAAGAATCCTTTCAAA
AAAAAAGGAGATTTTATATGAATATATATATATATGAATATATATGTAGCTTAAGCTCAGAATTTAGTTGTAGAAGTCAT
CGAGATTTTTTTTTTTTGTTTTAAGGTGAGAGCAGAGGTATTTTAACGCACACACAAACACACGCAACTCAATGTATCTT
ATTATTATTATTTAAGTAAGTGTGTCAAAAGGATATAGAACCACTAACGTACTGGTGAACATCATCAGTAAGCTATAAAG
ATAATGTTTAAAGAGGTCGGGTGCAAGAAGCATGTGTTTTTTTTTATAAGGTAAGGTTCAACCTCAAAGTTCCCAAGTCT
AGACCCCACCACGCCCACTTATCCGCCATCGCTTACAGAGATCGAGTGGGGAGTTGATTACATGTTATGTAGAATGCTTT
AGTTGATAATAAGATATGAGAAAAAAAAAACTTAACAACTAACTAGTTGGATGAAAAGCGAAAAAACTGAGAAATCTTTT
TGTACAATTTATAGTTTAGTGCAAGTTTCAAGTACAACATGCTATTATTTAAAGAATTCTATATATATACATATATATAT
ATATATATACAAAAAAAATATATATTGTGCAATAAATGTGAGAAAATGAAAATCGCCACACAAAACAGAAACTAAAACGA
ATAAGAGAAAATTTGTTGTTAAATGTTGCCGAGATCTTATATACGTATGTATACCTAATAACTGTTACAATAATAACCCT
TTATATATATAACTATATAAATGCACATGTGTATTCACCATGTGTGTAACGATAACGATGTTCAACAAATGTCTGAAATG
AAGTAAAACTATTATTATATGTAAATAAAACACAAAAAACAAAGAGAACAATTTTAATAAAAAAAAAGCAACAATAAAAT
ACAAAATCAAAGAAAATATCCACGCTCACACACACACATACACACACAAACATATATACGTCCTGGGCAGGACCCGAGAG
GCGTGAATCGGGAAAAATTCTGAAATAACCGTTCAATCGCTAACCGTTAACTGTAAAACCGCTGTAACTGTATTTGTACT
CGTGTACCTTTAGCTGTCTATAGCCGTCTCTCTCTAACTCGCTACCTAACTGTAAAGGAGCACCTCAATAACGAAAGAAG
AAGGAGCAACAGACAAGGATCAAAAATATATAGCAAGTGAAAAGGATGATGGAAAGAAGGAGGAGGAGGAGGAGAAACAA
GAAAAATAAGCACAACGAGAGATGGACCGATTGGCTCCAACTGGATGAAACAATTGTTAACAAAACGAAACAGAAACTAA
AAACTATCCTTAAAAAAAAATGAAATCACAAATGTAACTATTAATCTAAGCGAAGCATATGCCCTTGCCATTTTTATTTT
CTTATTATTCACCTGTTTTCTCTTTTCAATACAGCAGATTTTTTGAAAAACATACTTTTGAACATAAGCTGTTTCGTATG
CAAGCCACGTAATTGCTGTTACTTAGGAATATATATATACGAATTTTTCTTGGGTTCCAAAAGCGTTACAATACGCTCTG
TGTTAAATCTGTGCTTTTATTTTAATTTTCTATTTATAATTTGGCAAATTGGCGATCTCCCCTTACCTTACCTTTTTTTA
TCTTTCCTGAATTTGTTTTTTTTTTACCAAAACACGAATTATGAAGAGGATTCTACTAACAAGATGAAATATTATTGTTG
CGCACTGC
        Other Products of this Gene
        Other Transcripts
        Name
        FlyBase ID
        Length (nt)
        HDAC4-RB
        FBtr0073798
        5182
        HDAC4-RD
        FBtr0301298
        6312
        HDAC4-RE
        FBtr0301299
        5299
        HDAC4-RF
        FBtr0308576
        5487
        HDAC4-RG
        FBtr0333331
        6876
        HDAC4-RH
        FBtr0333332
        6510
        HDAC4-RI
        FBtr0333333
        6559
        Polypeptides
        Derived from THIS transcript
        Name
        FlyBase ID
        Length (aa)
        HDAC4-PJ
        FBpp0305526
        1205
        Derived from OTHER transcripts
        Name
        FlyBase ID
        Length (aa)
        HDAC4-PB
        FBpp0073629
        1181
        HDAC4-PD
        FBpp0290513
        1252
        HDAC4-PE
        FBpp0290514
        1203
        HDAC4-PF
        FBpp0300800
        1242
        HDAC4-PG
        FBpp0305523
        1269
        HDAC4-PH
        FBpp0305524
        1181
        HDAC4-PI
        FBpp0305525
        1205
        Comments

        Extended 3' UTR based on RNA-Seq and/or EST data.

        Transcriptional initiation is supported by short-capped RNA data (FBrf0209722) and RAMPAGE TSS data (FBrf0220331.

        External Crossreferences and Linkouts ( 1 )
        Crossreferences
        RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
        Synonyms and Secondary IDs (1)
        Reported As
        Symbol Synonym
        HDAC4-RJ
        Secondary FlyBase IDs
          References (0)