FB2026_01 , released March 12, 2026
FB2026_01 , released March 12, 2026
Transcript: Dmel\pHCl-1-RG
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General Information
Symbol
Dmel\pHCl-1-RG
Species
D. melanogaster
Annotation Symbol
CG44099-RG
FlyBase ID
FBtr0334976
Feature type
mRNA
Associated gene
Dmel\pHCl-1
Evidence Rank
Length (nt)
3687
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 7 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
      cDNA Clones, End Sequence Only (ESTs)
      Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        Sequence
        Sequence Downloader
        AGTTCGGGTCGGGTTTGCAATTCAACAGCACTGCGGAAGCGGAGAAAACTCGTCACCAAAGCGGACGGGCCAAACAATAA
GCCAGCGTAGCCACAGCCAGCGGCAAGTGCACATAAGTTGCAACAAGCAAAGTAACAACTACAGCAACAGCAAAAACAAC
GTAACAAAATAGGTAAAACAGTATAAACAACGCAACATTGTAAGCTGGCTGAAAGGCGTTGCCAGATTGTTGGCCAACAG
CAATAGCAACAACCGCACTAGCAACAGCTACAGCAGTACTACAACAACAACAACAACCATAACAATTGCCCAAAGGGCCA
AATGAACGTTGTCGGCTAGTCCGTCTGTCGCCCGCTTGGTGGCGCTAGCTAACTGACTGAGCAACAACAACAACACTGCG
TGCTGCCGCTGGAAATCCTGTCGCTAATTAGCGAACTGGCGACGTGTGCGCTTATGCAGACACAAGGCGATAGCGGATTC
CATTGAACTGGCTGCCGGTTTAAATTTGTTTTCGTAACATGGGCTGCGTCTTTGAAGCGGCCAAAGAGCAGCCCCACAAA
CCGAGAAGCAGGCAACTGAGGCGCAACCAATGCCGTGGAAAAGCGGAAAAAGCAGCAGCGGGGACCAGAGGCAAGGTCGC
TGTCAGAGGAAACAACGACAAGCCAGCTGAGGACATCAAAATCAAGGATAACTATCAACAAAACCATAAAACGCAAACCG
AAACACAAACAGAAGTAGCAGCAGTAGTAGCAATAGCAACAGACGCAGGAGCAGAAACAGAAACTGAAACAGAGGCTGAG
GCCCAAAAAGAGCCAGCAACCGGGCCCGAACATCTGAAGGCGGCGGCTCAAGTGCTTTTAACGATACGGCAGGCACGTCA
GGAGAACAACAAGCACAGTAGTAGTCAAGTGGCTGAAACGCACAAGGACGAAGGCGAGGACGCGTTGGCGCGGCAAGGAT
CCATTGTCGATACGGCGGCGGGCAGAATCGGAATCGATATTGCGGCAACAACGATTCAAGTCGCCGAGCGGCATGAGGAT
GGGCAGCATTGGCAGCAACACAATGTCCGCCGGCGGAGGCGCCAGCCAGATCCTGCAGCGCATCCTGCAAGCATCACCAA
ACTTTCGGCAATATCCCTGCATTTTCACGCCCTCGCCGCCCTAGCGAAAACGCTCCAAAAGCACGAGGACCTGAGTCCTG
TCCAGGATCGCCAGCCCCTAGCGTACCGGGCGTGGCAAGAACATCCGTATGCCGAGACCCAAATGCCCGCCACCATGTCA
GCGGCCATCATTGCGAATGTCGGCGCTACTGCAGCGGCCACCTCGGCAGCCGCCTTCCAGTATCTCGGCCAGCACTACAA
GCACTACAGCCAGTCGATCAGCTTCTACGCCGCCTCCAGTGTGCTCCTGATGCTTTGTTATCTGACCACCGCGTCCACGG
CAGCTGCCACGCAGTCGGAGACGGGTGCCCTCGACAAGCATCCCATTCATGGCATCGATTGGTCGAAATTTGATGAGTCC
AGTTCGGATAAGGAAATATTAGATTTACTGCTTGAGAAGAAGCGCTACGATAAACGATTACTGCCGCCTGTAAATGATGA
AGACTTTTGCTGTGGCTTGCAATCGCCCGATATGGCAACTAATCAAAATGCACGGAGACCACACAATCGCGGCACTCTGA
CGGTGAACGTGAACGTGCTGCTCCTGAGCTTAGCATCGCCCGACGAAAGCAGTTTGAAATACGAGGTTGAATTTCTGCTG
AACCAGCAATGGAACGATCCGCGACTGCAATATGGCAATAAGTCTCATTATGACTTCTTAAATGCTCTGCATCATCATGA
TAGCATCTGGACGCCGGATACGTATTTCATTATGCATGGCGATTTCAAGGATCCCATCATACCAATGCATTTCGCTTTAA
GAATATTTCGGAACGGGACCATTACGTACGCAATGAGACGTCACCTGATCTTATCCTGCCAGGGAAGTCTTCATATATTT
CCATTCGATGACCCCAAGTGTTCCTTCTCCATGGAGAGCATTTCCTACGAGGAGGCCCAAATCAAGTACGTCTGGAAAAA
CGATGAGGACACTCTGCGGAAGAGTCCTTCGCTGACCACATTGAACGCGTACTTAATCAAGAATCAAACGACGGCCTGCG
ATCAGAACAGCTGGAGAGGGAACTACAGCTGTCTTAGGGTCGATTTAATCTTTACCAGAGATCGTGCATTCTATTTCACC
ACCGTTTTTATACCCGGCATTATATTGGTGACGTCGTCCTTTATAACTTTCTGGCTAGAATGGAATGCCGTGCCAGCTAG
ATCGATGATAGGCGTGACAACAATGCTGAATTTCTTCACTACCTCGAACGGTTTCCGGAGCACTCTGCCGGTTGTTTCTA
ATCTGACGGCGATGAACGTGTGGGACGGCGTGTGTATGTGCTTCATCTACGCCTCCTTGCTGGAATTCGTCTGCGTCAAT
TATGTGGGGCGAAAGCGACCCCTGCACAACGTCGTCTATCGGCCCGGCGAGAATCCCGTAACACAGCCCGTAAGTATGCC
GTGACCTAATAATATTAATTATTTTTTAAATAATTTCTGTAGTTAAATTTGTAAAAGCATTCCAAAGCGCTTTCGTAAAA
AATTTCGTAGTGTTAAATTTCGATTTTTGTGCCACATGTCAAATAACTTTTAATAAATCAAATATTTTTCTACCTTTTTT
CATATATTTTTAACATACTTATACGCTTTTTGCTGGGTTTTTGCAAAAACGAAATGCAAACAACCAAAATATAACCAAAC
TGCAACCGCCAAACCAATTTTACGTTTTTTTTTTCGTATGCGTATGCGTATGTGTGTGTATGTACATATGTGTAAATAAC
TCCTTTTTCACCACTTGTATTTAACTTGTAAAATTGCCAACTTGTTTGCCAACCACCACCATGGTCCAATCAAAATTAAC
AAATAAGTTTTTTAAATTTACCGCCGTCTATCAGGGCGAAAAGCGTCAAAACGCCGGGGCACCGAACGAAATTGTGGCAT
GCACCACCTGCGGCGGCAGCAACAGTCCGTGCACCCATTCGGCAAATAATGGATGTGCCACGGAGACCTGCTTCGTTCAA
GTGCGGAAAAAGGAGCCACCTCATCCGATTCGAGTGGCCAAGACGATCGATGTCATCGCTAGAATTACATTTCCAACTGC
TTATGCCATTTTTCTGATATTCTTCTTTGTACACTATAAAGGATTTTCGTAAAATTAAGCAAAAAAAACACTACAAGTAA
AGCATAAACATACATACATATATAGATACTTGAACACGCTAAATTGCCGAAGCAAAGCCAGCAAATTCGTAATGTAATTC
GTAGAGAAACATGCAGACCGACATGAGAACTCGTTTGCTAAATTCTAGGGCCTTGCAAAGTCATCTAATTTTAATGGAAC
AAAGGGAAACACAAAGTACATCTAATTATTCATTAATGATTATTTAAATGGCAACAACATGACAAAACCAGTGATAAAAA
CGTCAAAATGAAAACATTAGTTTAAACTGAGTTGTTAATGGGGAAAAAAGAAAAATGAATAAGTTGTTAATAATTAATAT
TTACGAAAGTTAAATTTATGCAAATGAGCAAACATACGAATGAAACATTTTCGACTGCCTTTTTTAAAAATAGTAGACAA
ACAAACC
        Other Products of this Gene
        Other Transcripts
        Name
        FlyBase ID
        Length (nt)
        pHCl-1-RC
        FBtr0334972
        3361
        pHCl-1-RD
        FBtr0334973
        3164
        pHCl-1-RE
        FBtr0334974
        3239
        pHCl-1-RF
        FBtr0334975
        3293
        pHCl-1-RH
        FBtr0334971
        3247
        pHCl-1-RI
        FBtr0334970
        3223
        pHCl-1-RJ
        FBtr0334977
        3277
        pHCl-1-RK
        FBtr0334978
        3199
        pHCl-1-RL
        FBtr0334979
        5941
        pHCl-1-RM
        FBtr0334980
        3818
        pHCl-1-RN
        FBtr0334981
        6629
        pHCl-1-RO
        FBtr0334982
        3743
        pHCl-1-RP
        FBtr0334983
        3218
        pHCl-1-RS
        FBtr0474160
        3277
        pHCl-1-RT
        FBtr0474161
        3271
        pHCl-1-RU
        FBtr0474162
        3226
        Polypeptides
        Derived from THIS transcript
        Name
        FlyBase ID
        Length (aa)
        pHCl-1-PG
        FBpp0306989
        681
        Derived from OTHER transcripts
        Name
        FlyBase ID
        Length (aa)
        pHCl-1-PC
        FBpp0306985
        637
        pHCl-1-PD
        FBpp0306986
        737
        pHCl-1-PE
        FBpp0306987
        762
        pHCl-1-PF
        FBpp0306988
        779
        pHCl-1-PH
        FBpp0306984
        762
        pHCl-1-PI
        FBpp0306983
        754
        pHCl-1-PJ
        FBpp0306990
        772
        pHCl-1-PK
        FBpp0306991
        746
        pHCl-1-PL
        FBpp0306992
        747
        pHCl-1-PM
        FBpp0306993
        954
        pHCl-1-PN
        FBpp0306994
        978
        pHCl-1-PO
        FBpp0306995
        929
        pHCl-1-PP
        FBpp0306996
        754
        pHCl-1-PS
        FBpp0423159
        774
        pHCl-1-PT
        FBpp0423160
        770
        pHCl-1-PU
        FBpp0423161
        755
        Comments

        Based on cDNA(s) with retained intron; results in premature stop codon and/or downstream start; may or may not produce functional polypeptide.

        Transcript terminates at site supported by polyadenylated cDNA.

        External Crossreferences and Linkouts ( 1 )
        Crossreferences
        RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
        Synonyms and Secondary IDs (3)
        Reported As
        Symbol Synonym
        CG44099-RG
        pHCl-1-RG
        pHCl-RG
        Secondary FlyBase IDs
          References (0)