FB2026_02 , released June 18, 2026
Transcript: Dmel\hoe1-RI
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General Information
Symbol
Dmel\hoe1-RI
Species
D. melanogaster
Annotation Symbol
CG12787-RI
FlyBase ID
FBtr0336834
Feature type
mRNA
Associated gene
Dmel\hoe1
Evidence Rank
Length (nt)
3462
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 37 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        Contained within the annotated transcript, internally consistent
        End(s) extend beyond the annotated transcript, internally consistent
        Sequence
        Sequence Downloader
        TTATTCAGTTTACAACTTTCGCTCGAAACGGACGTGCGACTTTGTCCGGCAATCCGCGTTCGAGTGGCAAACAATAGCTA
TACAAATAAATAGTAATCAAACAAGCGAGTGCACAATAGGGGCATAAAACAACAACAAGAGAAAAAAAAAGCAGCCAACA
CTGCGTATGCGTGACTCGTTTATATGAAGCGGCGACATAAAACAGCCCTTTTCTACATCAAGATGTACAAGAGAAAGGCC
TGAAAGCCCACAAATGAACTTCTAGTGATTTGCGATAATAATTAGTAATAATAGAGAAAAAGAGTTCCAAAGTTAAATCA
CACATCGCGTCTAGATGTCATCCGCTTAACTCACTTAACACCCATCGAATTCGGTCAAAATTGCGCCCGTTCGTGTTCAC
GCTGCGCCCAGCCCAACGCCCACCACCACTGCCACCACCCAACATCCATTCAACAGCAACAACAACCATCAAAGCGGCAA
GACGACGGACTCCGGCACAGTGGGTCACACTGCCGCATCGACCACAAGACAGCGGCGGCAAAGTGGAAGTGGCAGTGGCA
TCCACAAGAAGCGCAAGAACATCTGGCCATTCAGGATGCGGGTGAAGGTGGCCAAGCGCCTGTGGTTCCACCGACAGGCG
TCCACCAAGAGCGACCGCTTTCCACAGCCAAACGAAGTAACAGAAGGTGCCTTACAGGTCTGGCGGACCCTGCCGGAGCG
CATTCGTCAGGATCCCAGTCTAGCCTCCTTTCGCCAGGAGCACGAACGTCTGCATGGCGATGTGGACCAGCTGCACGCGG
AGGAGTCGGAATTGCGTGTGCAGAATGGACACCACGAGGAGACGGCGCTGGCCAACCAGCCATTCACACAGATCGGGATC
AATGTGACGAACGAGGCGGGTCAGGTGCGGGTGCTCGATGGCAGGGATCTGGAGAATAACAACGATGATCAACACGACGA
GGCCGAGCCGCATGCCAAGAGTTTGATACGAAAGTATCTCATCTGGTTTAAGATAGCCATACTCCTGGTGGTCTGGTGCG
TCTTCACCGCCTTCCTGATGTCCAACAACGAGCATGTGGACCAACTGAGCCTCATTAGTGTTCCTAGGAATAGCTCACCC
AGAGTATTTCCCATTGCCACCGCCAGTCTGCAGAGGATTGGCCTGGGCCTGCGCGGACCCTTCCGCCTGCAGGAGAACGA
ACTGGCCATTAACGCGAGTGTTCCACTGCCCCTGCTCCAGGTGCAGGTGATGCGCAGCTATTTCGATGGCGAGGGCATGG
AGATCTACATCGAGAACGCCAGCCAGGTGTGGCAACTGGACGTGGTCTATCCCGATCTGATAGACGCCACCAGGGATACG
AAGAAGCAGCGTACCTTCGAGCTGAGTCCCACTGATCCCTTATGGTTGGCCCAGGCCAATCGCACGGAGCTGAGCTTCGA
GTTCACCAGCTCCATTGAGGGCGAATTGCCGCTCCAACTGAATGTGGATGAGTCGCCCATCTATAAGCGGGATGGAGTCA
TCTATGCTGCGGCTGTGCTCTGCGGCTTGTACGTGATGATCATCTGGGAGATTGTGAATCGAACCTTTGCTGCCATCATC
GCATCCACCTTGTCGGTTGGTATACTGGCTGCACTGAACTCCAGGCCCTCGATGGCCACCATCATGGGTTGGATTGATGT
GGAGACACTGCTGCTGCTCTTCGGCATGATGATTCTGGTGGCCATTCTCTCCGAGACGGGAGTCTTTGACTATCTGGCTG
TGTATGCCTACAAGATAACCAACGGACATGTTTGGCCACTCATCAATTGCCTCTGCCTGTTCACCGCTGTCCTGTCGTCC
TTCCTGGACAATGTGACCACCGTGCTGCTGATGACCCCGGTGACGATACGACTCTGCGAGGTCATGTGCCTCAATCCGGT
GCCCATACTCATGTGCATGGTCATCTACTCGAACATTGGCGGTGCACTGACTCCAGTGGGGGATCCGCCCAATGTCATCA
TAGCCTCGAATAGCTACATATCCAAAAATGGCGTCAATTTTGCTGTCTTCACCTTGCACATGCTGCCCGGAGTTCTGCTG
GTGATGGTGCAGACCTATATCCAGTTGCGTTTCAAGTTTCGCAACATCAGTGATCTGCAGTTCAAGGACTCGCCGGAGGT
GGAGGAACTGCGTCACGAGATACACGTATGGAAGCGGGCAGCCGCCAGTCTATCTGCCTATTCCAAGGATGAGGAACTGG
TGCGGCAGACACTGATGAAGAAGGTGAATCGCTTGAAGAGAAGCCTCAAGAAACGCATGACGGCGGTCATAGAACCGGCA
CCCAATTACCAACAAACTCTGGCCAATCTTCAGGCAAAGTACCCCATTCGCAACAAACCGCTGCTGATCAAGTGTTCGGC
CGCCTTGGTCTTTGTGATCAGTTTGTTTTTCCTGCACTCGGTACCCGAACTCCAGAGACTGTCTTTAGGATGGACCGCTC
TGCTGGGTGCCATATTCCTCATCATTCTGGCGGACATCGAGGACATGGAGGCCATACTGGCACGCGTGGAATGGTCCACG
CTGCTCTTCTTCGCAGCTCTGTTTATTCTCATGGAAGCCCTGACGGAACTGGGACTGATTGAGTGGATCGGCAACATGAC
AGAGGGCATTATCCTGGGAGTTGGCGAGGATCGGCGACTGATGGTGGCCATTTTGATCATTCTATGGGTTTCCGCTGTGG
CTTCCGCTTTTGTGGACAACATACCGCTGACCACGATGATGGTCAAGATCACCATATCACTGGCGCAGAATAGCACCTTG
AATCTGCCACTACAGCCTCTGGTTTGGGCCCTGGCCTTGGGCGCCTGTTTGGGAGGCAATGGCACTCTGATCGGAGCCTC
TGCCAATGTGGTTTGTGCCGGCGTGGCGGAGCAGCACGGCTACAAGTTCACCTTCCTGCAGTTCTTCAAAGTTGGATTTC
CCATCATGATCGGCAGCATCATTGTCACCACGGGCTATCTGCTCGTTTCGCATTCGCTGTTCGCGTGGCATTGATGAAGG
GCCCCCATGGATGAAGGAGTTGACTGTGTCGATTCGCAACAAGGCGCACTGTACCTCGTTACCTAACGGACAGAAACTGT
TCCGGATGCCACAGACATCCGGTTTCCGATGCCGGAAGCAGCTCCAAGCTGGATGGGAATCAACTCCTTATGCGATTGTC
ATAAGTGTTGGTTCCGGGTAAGCAGAGGGAAACGGAAACGAAGAATATTACATGAAAATACATTTATTTTTACACGTCGT
TGTTAGTGTAGTGTGTAGCATAAATAACATAACAAACAACAACAATTAAGAGAATTAAAATAAATATAAATTAATTATTT
ACAATTAATACTGTCGCTGAACTGTGAAACAATTGTTAAATGTTAAATGTATGAATACGAATCAAATATAAACGAAACAA
ATAAACTAATTTAAACAGCAAC
        Other Products of this Gene
        Other Transcripts
        Name
        FlyBase ID
        Length (nt)
        hoe1-RA
        FBtr0077397
        3246
        hoe1-RB
        FBtr0077395
        3390
        hoe1-RC
        FBtr0077396
        3340
        hoe1-RD
        FBtr0077398
        3474
        hoe1-RE
        FBtr0077399
        3512
        hoe1-RF
        FBtr0077400
        3458
        hoe1-RH
        FBtr0336833
        3534
        hoe1-RJ
        FBtr0345631
        3422
        Polypeptides
        Derived from THIS transcript
        Name
        FlyBase ID
        Length (aa)
        hoe1-PI
        FBpp0307798
        812
        Derived from OTHER transcripts
        Name
        FlyBase ID
        Length (aa)
        hoe1-PA
        FBpp0077088
        803
        hoe1-PB
        FBpp0077086
        812
        hoe1-PC
        FBpp0077087
        846
        hoe1-PD
        FBpp0077089
        812
        hoe1-PE
        FBpp0077090
        812
        hoe1-PF
        FBpp0077091
        812
        hoe1-PH
        FBpp0307797
        658
        hoe1-PJ
        FBpp0311695
        846
        Comments

        Transcript terminates at site supported by polyadenylated cDNA.

        Unconventional splice site postulated (GT-TG).

        transcript_exception: non_canonical_splice_site

        External Crossreferences and Linkouts ( 1 )
        Crossreferences
        RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
        Synonyms and Secondary IDs (1)
        Reported As
        Symbol Synonym
        hoe1-RI
        Secondary FlyBase IDs
          References (0)