FB2026_03 , released September 17, 2026
Transcript: Dmel\hoe1-RJ
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General Information
Symbol
Dmel\hoe1-RJ
Species
D. melanogaster
Annotation Symbol
CG12787-RJ
FlyBase ID
FBtr0345631
Feature type
mRNA
Associated gene
Dmel\hoe1
Evidence Rank
Length (nt)
3422
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 32 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
      cDNA Clones, End Sequence Only (ESTs)
      Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        Sequence
        Sequence Downloader
        CACAAACAAATGGCCACGAGGGATTGCGAATGGAGGAGGTGAAACGGAGGACCCGACCTGTCCGCCATGTGGAGAGGAGA
CTGCCAGCAGTTTTATGGCAGCCGCGAGAGGGAAAGTCGTGCCGACAACGACTGACTGAATTTTAATTAATTTGCGCCAA
GGAATAAAGTGAAAATTGGAAATTGGCTTATTTGGCCCAGACTGGCCGCCCTGCAGGCCAAATAAAAATGTGATAAGCGT
ACGAAATTACGCCGAAATCGAGTTGGTTTTTTTTTTTGTAAGGTGAACCAAGATGACATCTCCCTATGGATACAGTAAGC
CCACCTTTATGATAACGGACCACACTCGCGATCCGTATCATCTGCAGCCGGGTGATGACGACGACGATCGGGATGAGGAT
GAGGAGCGTCAGACGAAGCTGCAGGAGATCATCAGTTGGCTGCACTTGAATGCCAAGCATCGCAGCAAATGCGAAGTAAC
AGAAGGTGCCTTACAGGTCTGGCGGACCCTGCCGGAGCGCATTCGTCAGGATCCCAGTCTAGCCTCCTTTCGCCAGGAGC
ACGAACGTCTGCATGGCGATGTGGACCAGCTGCACGCGGAGGAGTCGGAATTGCGTGTGCAGAATGGACACCACGAGGAG
ACGGCGCTGGCCAACCAGCCATTCACACAGATCGGGATCAATGTGACGAACGAGGCGGGTCAGGTGCGGGTGCTCGATGG
CAGGGATCTGGAGAATAACAACGATGATCAACACGACGAGGCCGAGCCGCATGCCAAGAGTTTGATACGAAAGTATCTCA
TCTGGTTTAAGATAGCCATACTCCTGGTGGTCTGGTGCGTCTTCACCGCCTTCCTGATGTCCAACAACGAGCATGTGGAC
CAACTGAGCCTCATTAGTGTTCCTAGGAATAGCTCACCCAGAGTATTTCCCATTGCCACCGCCAGTCTGCAGAGGATTGG
CCTGGGCCTGCGCGGACCCTTCCGCCTGCAGGAGAACGAACTGGCCATTAACGCGAGTGTTCCACTGCCCCTGCTCCAGG
TGCAGGTGATGCGCAGCTATTTCGATGGCGAGGGCATGGAGATCTACATCGAGAACGCCAGCCAGGTGTGGCAACTGGAC
GTGGTCTATCCCGATCTGATAGACGCCACCAGGGATACGAAGAAGCAGCGTACCTTCGAGCTGAGTCCCACTGATCCCTT
ATGGTTGGCCCAGGCCAATCGCACGGAGCTGAGCTTCGAGTTCACCAGCTCCATTGAGGGCGAATTGCCGCTCCAACTGA
ATGTGGATGAGTCGCCCATCTATAAGCGGGATGGAGTCATCTATGCTGCGGCTGTGCTCTGCGGCTTGTACGTGATGATC
ATCTGGGAGATTGTGAATCGAACCTTTGCTGCCATCATCGCATCCACCTTGTCGGTTGGTATACTGGCTGCACTGAACTC
CAGGCCCTCGATGGCCACCATCATGGGTTGGATTGATGTGGAGACACTGCTGCTGCTCTTCGGCATGATGATTCTGGTGG
CCATTCTCTCCGAGACGGGAGTCTTTGACTATCTGGCTGTGTATGCCTACAAGATAACCAACGGACATGTTTGGCCACTC
ATCAATTGCCTCTGCCTGTTCACCGCTGTCCTGTCGTCCTTCCTGGACAATGTGACCACCGTGCTGCTGATGACCCCGGT
GACGATACGACTCTGCGAGGTCATGTGCCTCAATCCGGTGCCCATACTCATGTGCATGGTCATCTACTCGAACATTGGCG
GTGCACTGACTCCAGTGGGGGATCCGCCCAATGTCATCATAGCCTCGAATAGCTACATATCCAAAAATGGCGTCAATTTT
GCTGTCTTCACCTTGCACATGCTGCCCGGAGTTCTGCTGGTGATGGTGCAGACCTATATCCAGTTGCGTTTCAAGTTTCG
CAACATCAGTGATCTGCAGTTCAAGGACTCGCCGGAGGTGGAGGAACTGCGTCACGAGATACACGTATGGAAGCGGGCAG
CCGCCAGTCTATCTGCCTATTCCAAGGATGAGGAACTGGTGCGGCAGACACTGATGAAGAAGGTGAATCGCTTGAAGAGA
AGCCTCAAGAAACGCATGACGGCGGTCATAGAACCGGCACCCAATTACCAACAAACTCTGGCCAATCTTCAGGCAAAGTA
CCCCATTCGCAACAAACCGCTGCTGATCAAGTGTTCGGCCGCCTTGGTCTTTGTGATCAGTTTGTTTTTCCTGCACTCGG
TACCCGAACTCCAGAGACTGTCTTTAGGATGGACCGCTCTGCTGGGTGCCATATTCCTCATCATTCTGGCGGACATCGAG
GACATGGAGGCCATACTGGCACGCGTGGAATGGTCCACGCTGCTCTTCTTCGCAGCTCTGTTTATTCTCATGGAAGCCCT
GACGGAACTGGGACTGATTGAGTGGATCGGCAACATGACAGAGGGCATTATCCTGGGAGTTGGCGAGGATCGGCGACTGA
TGGTGGCCATTTTGATCATTCTATGGGTTTCCGCTGTGGCTTCCGCTTTTGTGGACAACATACCGCTGACCACGATGATG
GTCAAGATCACCATATCACTGGCGCAGAATAGCACCTTGAATCTGCCACTACAGCCTCTGGTTTGGGCCCTGGCCTTGGG
CGCCTGTTTGGGAGGCAATGGCACTCTGATCGGAGCCTCTGCCAATGTGGTTTGTGCCGGCGTGGCGGAGCAGCACGGCT
ACAAGTTCACCTTCCTGCAGTTCTTCAAAGTTGGATTTCCCATCATGATCGGCAGCATCATTGTCACCACGGGCTATCTG
CTCGTTTCGCATTCGCTGTTCGCGTGGCATTGATGAAGGGCCCCCATGGATGAAGGAGTTGACTGTGTCGATTCGCAACA
AGGCGCACTGTACCTCGTTACCTAACGGACAGAAACTGTTCCGGATGCCACAGACATCCGGTTTCCGATGCCGGAAGCAG
CTCCAAGCTGGATGGGAATCAACTCCTTATGCGATTGTCATAAGTGTTGGTTCCGGGTAAGCAGAGGGAAACGGAAACGA
AGAATATTACATGAAAATACATTTATTTTTACACGTCGTTGTTAGTGTAGTGTGTAGCATAAATAACATAACAAACAACA
ACAATTAAGAGAATTAAAATAAATATAAATTAATTATTTACAATTAATACTGTCGCTGAACTGTGAAACAATTGTTAAAT
GTTAAATGTATGAATACGAATCAAATATAAACGAAACAAATAAACTAATTTAAACAGCAACATTTTTGCTATTTGAGTTG
TTTATAACTTCTTTTTATGGAATGTAAAAATTTATTGGCGACAAACATGTTTTTATTTCTTTTGCTAAGTAAAGGCTTTT
CCGTTTTTATGGTTGAGTAATAAAAAAATAATGTTGTTTCCTTAACTCTACAAAAATGTAAT
        Other Products of this Gene
        Other Transcripts
        Name
        FlyBase ID
        Length (nt)
        hoe1-RA
        FBtr0077397
        3246
        hoe1-RB
        FBtr0077395
        3390
        hoe1-RC
        FBtr0077396
        3340
        hoe1-RD
        FBtr0077398
        3474
        hoe1-RE
        FBtr0077399
        3512
        hoe1-RF
        FBtr0077400
        3458
        hoe1-RH
        FBtr0336833
        3534
        hoe1-RI
        FBtr0336834
        3462
        Polypeptides
        Derived from THIS transcript
        Name
        FlyBase ID
        Length (aa)
        hoe1-PJ
        FBpp0311695
        846
        Derived from OTHER transcripts
        Name
        FlyBase ID
        Length (aa)
        hoe1-PA
        FBpp0077088
        803
        hoe1-PB
        FBpp0077086
        812
        hoe1-PC
        FBpp0077087
        846
        hoe1-PD
        FBpp0077089
        812
        hoe1-PE
        FBpp0077090
        812
        hoe1-PF
        FBpp0077091
        812
        hoe1-PH
        FBpp0307797
        658
        hoe1-PI
        FBpp0307798
        812
        Comments

        Transcriptional initiation is supported by RAMPAGE TSS data (FBrf0220331).

        Transcript terminates at site supported by polyadenylated cDNA.

        External Crossreferences and Linkouts ( 1 )
        Crossreferences
        RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
        Synonyms and Secondary IDs (1)
        Reported As
        Symbol Synonym
        hoe1-RJ
        Secondary FlyBase IDs
          References (0)