FB2026_01 , released March 12, 2026
FB2026_01 , released March 12, 2026
Transcript: Dmel\hoe1-RE
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General Information
Symbol
Dmel\hoe1-RE
Species
D. melanogaster
Annotation Symbol
CG12787-RE
FlyBase ID
FBtr0077399
Feature type
mRNA
Associated gene
Dmel\hoe1
Evidence Rank
Length (nt)
3512
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 32 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        Contained within the annotated transcript, internally consistent
        End(s) extend beyond the annotated transcript, internally consistent
          Sequence
          Sequence Downloader
          TTATTCAGTTTACAACTTTCGCTCGAAACGGACGTGCGACTTTGTCCGGCAATCCGCGTTCGAGTGGCAAACAATAGCTA
TACAAATAAATAGTAATCAAACAAGCGAGTGCACAATAGGGGCATAAAACAACAACAAGAGAAAAAAAAAGTAATTCAAA
CCTAAAGTGAGCTTATCATCGAATCTAACTTCTTAAGCAAGCAGCCAACACTGCGTATGCGTGACTCGTTTATATGAAGC
GGCGACATAAAACAGCCCTTTTCTACATCAAGATGTACAAGAGAAAGGCCTGAAAGCCCACAAATGAACTTCTAGTGATT
TGCGATAATAATTAGTAATAATAGAGAAAAAGAGTTCCAAAGTTAAATCACACATCGCGTCTAGATGTCATCCGCTTAAC
TCACTTAACACCCATCGAATTCGGTCAAAATTGCGCCCGTTCGTGTTCACGCTGCGCCCAGCCCAACGCCCACCACCACT
GCCACCACCCAACATCCATTCAACAGCAACAACAACCATCAAAGCGGCAAGACGACGGACTCCGGCACAGTGGGTCACAC
TGCCGCATCGACCACAAGACAGCGGCGGCAAAGTGGAAGTGGCAGTGGCATCCACAAGAAGCGCAAGAACATCTGGCCAT
TCAGGATGCGGGTGAAGGTGGCCAAGCGCCTGTGGTTCCACCGACAGGCGTCCACCAAGAGCGACCGCTTTCCACAGCCA
AACGAAGTAACAGAAGGTGCCTTACAGGTCTGGCGGACCCTGCCGGAGCGCATTCGTCAGGATCCCAGTCTAGCCTCCTT
TCGCCAGGAGCACGAACGTCTGCATGGCGATGTGGACCAGCTGCACGCGGAGGAGTCGGAATTGCGTGTGCAGAATGGAC
ACCACGAGGAGACGGCGCTGGCCAACCAGCCATTCACACAGATCGGGATCAATGTGACGAACGAGGCGGGTCAGGTGCGG
GTGCTCGATGGCAGGGATCTGGAGAATAACAACGATGATCAACACGACGAGGCCGAGCCGCATGCCAAGAGTTTGATACG
AAAGTATCTCATCTGGTTTAAGATAGCCATACTCCTGGTGGTCTGGTGCGTCTTCACCGCCTTCCTGATGTCCAACAACG
AGCATGTGGACCAACTGAGCCTCATTAGTGTTCCTAGGAATAGCTCACCCAGAGTATTTCCCATTGCCACCGCCAGTCTG
CAGAGGATTGGCCTGGGCCTGCGCGGACCCTTCCGCCTGCAGGAGAACGAACTGGCCATTAACGCGAGTGTTCCACTGCC
CCTGCTCCAGGTGCAGGTGATGCGCAGCTATTTCGATGGCGAGGGCATGGAGATCTACATCGAGAACGCCAGCCAGGTGT
GGCAACTGGACGTGGTCTATCCCGATCTGATAGACGCCACCAGGGATACGAAGAAGCAGCGTACCTTCGAGCTGAGTCCC
ACTGATCCCTTATGGTTGGCCCAGGCCAATCGCACGGAGCTGAGCTTCGAGTTCACCAGCTCCATTGAGGGCGAATTGCC
GCTCCAACTGAATGTGGATGAGTCGCCCATCTATAAGCGGGATGGAGTCATCTATGCTGCGGCTGTGCTCTGCGGCTTGT
ACGTGATGATCATCTGGGAGATTGTGAATCGAACCTTTGCTGCCATCATCGCATCCACCTTGTCGGTTGGTATACTGGCT
GCACTGAACTCCAGGCCCTCGATGGCCACCATCATGGGTTGGATTGATGTGGAGACACTGCTGCTGCTCTTCGGCATGAT
GATTCTGGTGGCCATTCTCTCCGAGACGGGAGTCTTTGACTATCTGGCTGTGTATGCCTACAAGATAACCAACGGACATG
TTTGGCCACTCATCAATTGCCTCTGCCTGTTCACCGCTGTCCTGTCGTCCTTCCTGGACAATGTGACCACCGTGCTGCTG
ATGACCCCGGTGACGATACGACTCTGCGAGGTCATGTGCCTCAATCCGGTGCCCATACTCATGTGCATGGTCATCTACTC
GAACATTGGCGGTGCACTGACTCCAGTGGGGGATCCGCCCAATGTCATCATAGCCTCGAATAGCTACATATCCAAAAATG
GCGTCAATTTTGCTGTCTTCACCTTGCACATGCTGCCCGGAGTTCTGCTGGTGATGGTGCAGACCTATATCCAGTTGCGT
TTCAAGTTTCGCAACATCAGTGATCTGCAGTTCAAGGACTCGCCGGAGGTGGAGGAACTGCGTCACGAGATACACGTATG
GAAGCGGGCAGCCGCCAGTCTATCTGCCTATTCCAAGGATGAGGAACTGGTGCGGCAGACACTGATGAAGAAGGTGAATC
GCTTGAAGAGAAGCCTCAAGAAACGCATGACGGCGGTCATAGAACCGGCACCCAATTACCAACAAACTCTGGCCAATCTT
CAGGCAAAGTACCCCATTCGCAACAAACCGCTGCTGATCAAGTGTTCGGCCGCCTTGGTCTTTGTGATCAGTTTGTTTTT
CCTGCACTCGGTACCCGAACTCCAGAGACTGTCTTTAGGATGGACCGCTCTGCTGGGTGCCATATTCCTCATCATTCTGG
CGGACATCGAGGACATGGAGGCCATACTGGCACGCGTGGAATGGTCCACGCTGCTCTTCTTCGCAGCTCTGTTTATTCTC
ATGGAAGCCCTGACGGAACTGGGACTGATTGAGTGGATCGGCAACATGACAGAGGGCATTATCCTGGGAGTTGGCGAGGA
TCGGCGACTGATGGTGGCCATTTTGATCATTCTATGGGTTTCCGCTGTGGCTTCCGCTTTTGTGGACAACATACCGCTGA
CCACGATGATGGTCAAGATCACCATATCACTGGCGCAGAATAGCACCTTGAATCTGCCACTACAGCCTCTGGTTTGGGCC
CTGGCCTTGGGCGCCTGTTTGGGAGGCAATGGCACTCTGATCGGAGCCTCTGCCAATGTGGTTTGTGCCGGCGTGGCGGA
GCAGCACGGCTACAAGTTCACCTTCCTGCAGTTCTTCAAAGTTGGATTTCCCATCATGATCGGCAGCATCATTGTCACCA
CGGGCTATCTGCTCGTTTCGCATTCGCTGTTCGCGTGGCATTGATGAAGGGCCCCCATGGATGAAGGAGTTGACTGTGTC
GATTCGCAACAAGGCGCACTGTACCTCGTTACCTAACGGACAGAAACTGTTCCGGATGCCACAGACATCCGGTTTCCGAT
GCCGGAAGCAGCTCCAAGCTGGATGGGAATCAACTCCTTATGCGATTGTCATAAGTGTTGGTTCCGGGTAAGCAGAGGGA
AACGGAAACGAAGAATATTACATGAAAATACATTTATTTTTACACGTCGTTGTTAGTGTAGTGTGTAGCATAAATAACAT
AACAAACAACAACAATTAAGAGAATTAAAATAAATATAAATTAATTATTTACAATTAATACTGTCGCTGAACTGTGAAAC
AATTGTTAAATGTTAAATGTATGAATACGAATCAAATATAAACGAAACAAATAAACTAATTTAAACAGCAAC
          Other Products of this Gene
          Other Transcripts
          Name
          FlyBase ID
          Length (nt)
          hoe1-RA
          FBtr0077397
          3246
          hoe1-RB
          FBtr0077395
          3390
          hoe1-RC
          FBtr0077396
          3340
          hoe1-RD
          FBtr0077398
          3474
          hoe1-RF
          FBtr0077400
          3458
          hoe1-RH
          FBtr0336833
          3534
          hoe1-RI
          FBtr0336834
          3462
          hoe1-RJ
          FBtr0345631
          3422
          Polypeptides
          Derived from THIS transcript
          Name
          FlyBase ID
          Length (aa)
          hoe1-PE
          FBpp0077090
          812
          Derived from OTHER transcripts
          Name
          FlyBase ID
          Length (aa)
          hoe1-PA
          FBpp0077088
          803
          hoe1-PB
          FBpp0077086
          812
          hoe1-PC
          FBpp0077087
          846
          hoe1-PD
          FBpp0077089
          812
          hoe1-PF
          FBpp0077091
          812
          hoe1-PH
          FBpp0307797
          658
          hoe1-PI
          FBpp0307798
          812
          hoe1-PJ
          FBpp0311695
          846
          Comments

          Transcript terminates at site supported by polyadenylated cDNA.

          Unconventional splice site postulated (GT-TG).

          transcript_exception: non_canonical_splice_site

          External Crossreferences and Linkouts ( 1 )
          Crossreferences
          RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
          Synonyms and Secondary IDs (2)
          Reported As
          Symbol Synonym
          CG12787-RE
          (FlyBase, 1996-)
          hoe1-RE
          (FlyBase, 1996-)
          Secondary FlyBase IDs
            References (2)