FB2026_03 , released September 17, 2026
Transcript: Dmel\Root-RE
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General Information
Symbol
Dmel\Root-RE
Species
D. melanogaster
Annotation Symbol
CG6129-RE
FlyBase ID
FBtr0339244
Feature type
Associated gene
Evidence Rank
Length (nt)
7040
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 17 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
      cDNA Clones, End Sequence Only (ESTs)
      Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        Sequence
        ACTAGAAATAAGAGACGGCTCTCTACCTCATAAATTATGCAAATCATTTTCAAATTTCTCTTTTTGGCCTCGTGGTGCAG
        TGTTCTCCACCTTTTCATGCACTTCGCTGGCCCATTGATAAGGATAATGGAAATGGCTCAGTTACCACCAACCAACCGCA
        ATTAAGCTGACCCAAAGCCGTTGCCTGGTTACCCAAAAGGTGTCCACAACAACTGGCCGCGTTCAGGAAGCAGAAGGCCA
        AAACAACCACCGCCAGGAGTGCAGGCACCGCCGAAGGACCAAGGACAAACCCTTACAACCCGTCTGGTCAGTTCGGTTTG
        TGTATTTAGACAAGGAGTAACGTGTGCAACGTGTTAAATATTCAGCCAGATGCAGTTTATAAATGGTTCACTAATATAAA
        TGGATGCAGGCGTATCGCGATAACTTCAAGCAAACGCCCTGCCCATCGGCCGTCGACCTTCAGGCGGCGGGACCAGCCCA
        CCAATCGGCCACCGCCTCTCGGCTGCCCTTCTCGCGCAGCCAGCGTGGGCGTGACCCCTCGGCAAGTGGCGCCTCAGTTT
        CCGCCTCCGTTGCTGGTGGTCTAACGCCCAGGATGATGAGTCCGGGTCCGCCGGGCGCCGGAGGAGGAGGAGGAGGAGGA
        GTGAGCGGCGGCGGCAGTGGAGATCCCTCGGCCCTGTTGCGCCAGAATCAGGAGCTGCGCCAACGGCTGGCCGACGAGTC
        GCATAGCTATCGACGCCGCCTGGACACCTACAAGCAGGCGCAGCACAACCAGGCCAACTTGGTCAGCCGGCTGCAGTCGA
        AGATCCAGCAGTATCGACAGCGGTGTAGCGACCTGGAGGAGCGCATGCACGAGACCATTAAGCCGACGGCGGGAGTAGGA
        CCCAAGCTGACCACGGGTCCCACCAACCAAGTGCTGTGTTCAACTTCTTTAACTCTGGGACAGAGCAGCTTGCCCTGCAG
        CTCCTCACTGGACTCGCCGCCGCCCAGTTGCAGTCGTGACTATGTTGACGATGTCTTGGTCACCGGAGGCGGCGCCGGTG
        CGGCGGAACTGTGCCGCAAACTGGAGGAGGAGCACCAGCGCTGCGAGCAGATTGTCGCCCAGAACAGCGCACTGCGTCAG
        CAGCTGGAGGAGTCGAATCGCACCAACGAGGCGCTCACCAACGACCTACAGAAGCTGACCAACGACTGGGCGAGTCTGCG
        GGATGAGCTGCTGATCAAGGAGGATGAGTTCAAGGAGGAGGAGCAGGCCTTCAAGGACTACTACAACAGCGAGCACAATC
        GCCTGCTGAAGATGTGGCGCGAAGTTGTGGCCGTCAAGAGATCCTTCAAGGAGATGCAGACGGCCATGAAGGCGGAGGTA
        GCCAAGATGGGTCAGGAGATCAATTGTGTGGGCAAGGACATCAATGGCTCCAACGCAACGGTCGCCTTTGCCGTCCAGCA
        AGCCAAGCGGGCTGCGGATGATGAACTGAAGCAATCGCAGCGCAGCAACGATGAACTCCAGAATCAATTGGCCACCCTGA
        AGGTGCAGTACGAGAGTGCCCGGCACGAGATCATGGAGCGGGATCAGCGACTACTGGAGCTAATGAATCAGTTGAAGAAG
        CTGGAGGATCGCTGCGCCCAAGCCGAATCCCAAGCAGCTCTGGCCAGTCGCTATAGCGACGAGATCGAGCGACTGAACAA
        TTCCATGCGAGAAATCGCGCAGGCCGTCGTTCAAGATGCTGAGAACGCAGATCGCGAAGCAGACGCCGAGGTCACCGGCG
        GTGTCATGCAGCACATGCACCTCACGCGTGACGCCGCCTCTGTTGTGGGCGGAGCAGGTGGAGCGGGCAGCACCGCCGGC
        GGCGGAGGGAAATCACCGCGTCGCAACTCGACACGCGCCTCTCAAGCCTTCGCCGAGGGCACCATCTCAGCCGTCCAGGC
        GGCGCTCCACAAATACCAGCTGGCCCTGCACGACATGCAGGTGAAATTCCAGAACACCAGCGAGACCCTGCGCACCACCA
        AGGCCCAGCTGGAGACCAGCGAGGGTACCAAACAGCTGCTGACCACCAAGATGCAGCAGCTCACCGAGAAACTGGACAGC
        AGCAACTCCAAGCTATCGGAATTGCTGCAGGAAAGGGAGAGTCTGCAGCGCGGACTGGACGATATCCGTGTCCAGAAGCA
        GCAGTCTGAGATGGGACGAGCCGATATCAATAGTGCGTTCGAGAATCTGAGCAGTGATTATGAGAAGATGCAGCTGAACT
        GTGGTAAACTCCAAAAACGTATCGATTCCATGGAGGAGGACAAAAAGGCAGTGGAGCTGGAGATCCAACGTATACTGAAG
        GACAAGAACATAACCGAGTTGAATTTGAGGTCTGAGGAAGATCGCAGTAGTCGTTTGCGGGAGGAAACCATATCCTTGCG
        CGAGGAGCTTAACCGAGTGAGCCTGAATCGTGATCTTCTCGAGCAGCAGCGCATCGAGTCCGATAATTTGATCAATCTGC
        TCGAGAAACAGAAGTCCGACCTGGAGTACGATCTGGACAAGCTGTTGCTGGAGAAGTGCGATCTGCAGGAGAAGCACGAG
        AAGCTATCCAACAATAGCTGCTCCACCAGTGATGAGCTGAAGAGCGTTCAAAATTGCCTTCAGGAGGCGCAGGAGGAGCG
        CAAGAAGCTCCGTATTCAGTCCGTCGATCAGTGCAATGAAATCGGAGAGCTTAAGAAGGAGCTGGCGATACTGGACAAGG
        CACGACTCGAACTGGAGACGGACAATCTGTCGGCTGGGGAAAAGCTCAAGTGTCTGCAGCTGGAGAAGGAGAAAATTCTG
        CAAGACTTGGCCTGCGTCACCCGGGATCGTGGTGACATCCACAATCAGCTAACGGCGATGTGTCGCAAAAAGGAGGCTCT
        GAATGAGGAACTTATGCGGACTCGGCAGCGTCTGGAGCAAACCACCGAGACCAATAGCCGGCTGAATAGAAATCTGGAGG
        AGATGGTGAAGGATGTGGAGGAGAAGCAAGTGGTCATCGATCTGCACGAGAAGGACACACATCGCTTGAACGAACTCCTG
        GCCGCCCTGCGTTCGGAGAAGGAATCCCTGGAATCGGTGCTCTTCGATACAAACACCTCACTGGAGGCCACCGAGGAGCG
        ACGCAGTCAGCTGGAGCGGGATCTGCAGGAGGCTCTGGTGCGTGAGGAGAGCCTAAAGAATCATGTGGCTCGCTTGCAAA
        AGGAGCTGGAGCAGTGTCAGCGCAAGGCCCAAGAGACCAAGACGCAGCTGCTTAACGCCGCCCGTGCGGCTGAGAGTGAC
        TTCAACCAGAAAATCGCCAATCTGCAGGCTTGTGCAGAGGAGGCGGCCAAACGACATGGCGAGGAGATTCTACAGTTGCG
        AAATGCCTTGGAGAAGCGAATGCAACAGGCTCTGCAAGCGTTGCAGACGGCCAAGGATGATGAGATCGAGAAGTTGCAGG
        AGCGTCTGGCCACCTTGCAGGCGCATCTCGAGAGCCTTGTCCAGCAGCATGAGGAGGCACTGATTCGGGCGGAGAGCGAG
        AAGCAGCAAGCCCTTTTGATTGCCCACCGGGATAAGCAAGCGGTGGCCGAGCGTTTGGAGGCCGTATCCCGGGATCTCAA
        GACCGAACAGGAGTCCCTCGACCGGAGCAGACGGGAGGCCAATGCGCGCGATGAGAAGCAGAGGGCTGCCATTGCCCAGC
        TGAAGGACGAGATGGTGCAGATGCGCACCAAGGAGGAGGAGCACAAGATTAAGTTGGAGGAATGCATCCGGAAGCAGGAG
        CTGCAGTTGAGCAGCTTGCGCGAAGAACGCGAATCCTTGTGCCGTGTGAGTGAGGAACTAAAGATGGAGATTCGTCTGAA
        GGAGGACAGAATGGAGAGCACCAACAATGAGTTGCAAGATGCGCTGCGCAAGTCCAAGGAGGGTGAGGGCTTCATCGATA
        GCCTGCGCAAAGAGTTGACCGACTGTCGCCGCCAACTGGCGGACAGCAACATCGAGCGGGACAAGTATTCCGGCAGCAAC
        AAGGAGCTGCGCGACCACGTCAAGCGTGTGGAGAGCGCCAAGCGGGAGCAGGCGCGCGCCATCGAGGAGGCTCTGCAGAA
        GATCAGCAATCTGGAGGATACCAAGAACTCGTTGGAGAACGAACGCACTCGATTGAGCACCATACTGAAGGAGACGGAGA
        ATCACTTTACAAAGACCACCCAGGATCTGAATGCTACCAAGGCGCAGCTGCAGAAGGCTCAAGTGGAGTTCGCCCAGAAG
        GACGAGGGCGGCAAGGAGTTGCAGTGCAAGCTGGTCGCCGAGGTGGAATTGAAGGAGCGGGCACAGCAGGAGCTCTGCCA
        GATTAAGAAGCAATTATCGGATCTGGAAGCCAATCTGTGTGCCACTCGCCAGGAATTGGGCAGGGCTCGGTGTCAGAACA
        ACCAGGAGGAGCATCGCTTCCATGCCAGGGAGCAGGAGTTGGCCCAGCGCTTGGAGGAGGGTCGTGGTAGGGAGAAGCGC
        CTGGAGGATCAGAAGCACAACCTGGAGGTCTGCCTAGCCGATGCCACTCAGCAGATCCAGGAGTTGAAGGCCCGTTTGGG
        CGGCGCCGAAGGTCGCATCCGTGCTTTGGATGAGCAGTTGTCCTGCGTGGAACTACACAAGCGGGATACCGAACAGAAGC
        TATCCTCGGTGGTTCACACTCTGCGCCGGATTGCTGGCATCCAAGTGGACGGCAGTGTAAATTTGTCTCATCGCTTGCTG
        AGTCCCTCGCGAAGATTCAGTCCGTCTCGCAGCTGCGGAGACTATGACAACAGGAGCACATCACAATGCCCAGATGGACC
        AATTGATGTGGACCCGGATCTGGTTAGGAAGGGTGTCCGCAACCTGATGCATCAGGTGGCTCAGTTGGAGCGCGAGAAGG
        ATGACTACAAATCCCAATTGGGAGCAGCTAAGAAGCAACTCCAAGATGCTGCTGACCAGCAGCTACGATGCGATGCCAAG
        CTGGGCAAACTGCAGGCCATGCTAAGAAATCTCCAAGAGGAGAAGAGCAATCTGGAAACGGACCGCAAGATGAAAATCTC
        CGCCATCCAGGCGCTAGAGGAGAAGCTCAAGCATCGCAACGATGAGTGTCAGATGCTAAGAGAACGTTTGGCCCAAACAG
        AGATGCAACTGGCTGCCACATCCGAGGAGAATGGCCAGAACGAGGAACGACTGGAGAAGAGCCGACAGCAGTGCTCCAAA
        CTGGACAATGAGAAGCGCCAGCTGCAGGAGGAATTGGCCAAGGTTGAGGGCCGGGCCAGCAAACTCGAACTGCAGCGTGT
        TGCCATGGAGGGCGATCTTACCAGGCTACAAATGGCCCTACAAGAGAAGGACTGCAGCATTCGTCAAATGGCTGAGCGGC
        TGGAGAACCAAAACCGTGCCTTGACCCAATTGGAGGATCGCTGCACCGCCCTTAAGTCCACCGTCGATCAGCTGAAGGAG
        CGCCTCCAGAAGTCCGCTGTGAGTGAAACCCAACTGCGGGGCGAGATAAAGACGCTCCAAAAGGAGCTTTCCGAGCAGGG
        TCACTGCTCCCAGGCCAACGAGGATAAGCTGAAGTTGGTGCAAAAGTCTCTGCAGACCGCTGAGAACGAGAAGCGCATCC
        TCACCGAGCGCCTAGATAGCGCTCAGACCAATCTCAACGAGCTGCGACGTAGCCAACAGGCCCAGCTGGATGGTAACCAG
        CGCCTGCAGGAACAGGTGACCGATCTGGAGGTTCAGCGTTCGGCACTGGAGTCCCAACTTCGGATTGCCAAGTGGAACCA
        GGAGAGTGGCGGCGACAAGGATCTGACAAACGGCAACGGAGGCGGAAATGGCGAGGAGGAGCTCAGCAGGCAGCTGAAGT
        CCTCGCAGCGGGAAAAGTCGGAGCTACGCAGCAAACTGCAAACCCTACAGGACAAAGTCAAACAGTTGGAGTGCGACCGG
        AAAAGCAAGTTTTCGGGTGGAAACGCCTATGATCGGGCTGAGAAGTCCAACTCCTTTTACGGTGGCGCAGCTGAATCCGG
        CGAGTTCGACTCCAATCGCTACGATGTGGGTGGAGGAAATGCTGGCGGAGGCTCTTTCAACTGCGGATTGGATCACAGTG
        TAATCGAGCAGGAGACGCGCGATCTGCGACTCAAGGTGCGCCGCCTGGAGACATTGTTGGCGGAGAAGGAGTCCGAGTTG
        GCGCGCTGCAAGGCGCGAATGAACGACAGCGCCAAGTGCCATGATGGCTTAGATGGAGATCGTTATCGCAGTGCTCAGAT
        GCACGCAGAGAAGCTTCTTGACGCCAGGGAGCAGTCGCATCGGCAACAAGTGCTGCGCCTGGAGAACCAGATCTCAATGC
        TGCGCGAGCAGTTGGCCCAGGAGGCCAAACGGCGACAGCAGTACATTCTACGCAGCTCGAAGGCCAATAGAGAAATGCAG
        CATCTGAGGAGCACCCTAGGAGATTCCCTGCGCAATGTCTCCCAGCACCCGGTGGATCCCCATCTCTTGGAAAGCGAGAG
        CCGGCGTCTCGACTCGGCCGTTTCAATGAGCCTGCCACCGTCGAGCTGCCGGGACTATGATCGCGATTAGAGTGATGTGA
        AGTTAAGATTTGGTTAAATTTGATCCCGCCAAGAAGACGTAACGCTCACTGCCATTTGCATTTATTTAGAAAAAGGCTTC
        CTGGAGTCCTCCAGACGCATCTGAGTTAATCATCACGTGCATTTCAACTCGTTTGCCTTAGTACAATTCTAGCTGTTCAT
        TGTCTGCCCTGTTAGACAATCGAATATAGTGCGTTCCATCCAGTCGCAGCGATGATGCCATCCTTACATCTCCACATAAA
        TATCTATGCATTAATGGGTCACGAGTTCCGATTCTCCCTGAACGTGGGAGAACACCGAACTATATATCACACGACAATTA
        ACATCATTTGCATTTACACATTGGCCAGAACACCGAACTAGTCAGCACGAAACAAAGCAACTATATTTAATACTTAGCAT
        ATTTAATCCTATATACAGTGCGGTTTGTCGACTGCATTTTTATAAAATATATACAAGCGAAACACACTCCTAATGAACAC
        
        Other Products of this Gene
        Other Transcripts
        Name
        FlyBase ID
        Length (nt)
        FBtr0304161
        6731
        FBtr0339245
        7005
        Polypeptides
        Derived from THIS transcript
        Name
        FlyBase ID
        Length (aa)
        FBpp0308351
        2048
        Derived from OTHER transcripts
        Name
        FlyBase ID
        Length (aa)
        FBpp0293091
        2048
        FBpp0308352
        2048
        Comments

        Extended 5' UTR based on RNA-Seq and/or EST data.

        Transcript terminates at site supported by polyadenylated cDNA.

        External Crossreferences and Linkouts ( 1 )
        Crossreferences
        RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
        Synonyms and Secondary IDs (2)
        Reported As
        Symbol Synonym
        Root-RE
        Rootletin-RE
        Secondary FlyBase IDs
          References (0)