FB2026_01 , released March 12, 2026
FB2026_01 , released March 12, 2026
Transcript: Dmel\Root-RF
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General Information
Symbol
Dmel\Root-RF
Species
D. melanogaster
Annotation Symbol
CG6129-RF
FlyBase ID
FBtr0339245
Feature type
mRNA
Associated gene
Dmel\Root
Evidence Rank
Length (nt)
7005
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 17 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
      cDNA Clones, End Sequence Only (ESTs)
      Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        Sequence
        Sequence Downloader
        AGTTGGCTCAGTTCCGCGTCCGCAGACAGTTCGAATTCTGGCCAAAAACAGCCAACTAGGCCCGCAAGCCAGAAAATATA
CTTTCCCTACCCGTGGAGCGTTAGTTGCGTTAGTGCTTCCGCATTCCGCAAATTTGTGTCAATTGCCACCAGGCAGGACA
CGCTAGCGGAGGAGCCAAGGAGCAGGCCACGAGCCCCCGGATTTCGTGATAACTTGATGAGTATTCAATTGGAGCTCAAT
CAGTTAACAACAGTGTCTAGTGCGCGGTCTTAATTTGGACATAATAAAAACCAAAGCAAGTGCCTTAAGGATTCAGTTGG
GATACATATATACATACATATACCAGTCACATTCACTGGCAGTGAAAAATGCAGGCGTATCGCGATAACTTCAAGCAAAC
GCCCTGCCCATCGGCCGTCGACCTTCAGGCGGCGGGACCAGCCCACCAATCGGCCACCGCCTCTCGGCTGCCCTTCTCGC
GCAGCCAGCGTGGGCGTGACCCCTCGGCAAGTGGCGCCTCAGTTTCCGCCTCCGTTGCTGGTGGTCTAACGCCCAGGATG
ATGAGTCCGGGTCCGCCGGGCGCCGGAGGAGGAGGAGGAGGAGGAGTGAGCGGCGGCGGCAGTGGAGATCCCTCGGCCCT
GTTGCGCCAGAATCAGGAGCTGCGCCAACGGCTGGCCGACGAGTCGCATAGCTATCGACGCCGCCTGGACACCTACAAGC
AGGCGCAGCACAACCAGGCCAACTTGGTCAGCCGGCTGCAGTCGAAGATCCAGCAGTATCGACAGCGGTGTAGCGACCTG
GAGGAGCGCATGCACGAGACCATTAAGCCGACGGCGGGAGTAGGACCCAAGCTGACCACGGGTCCCACCAACCAAGTGCT
GTGTTCAACTTCTTTAACTCTGGGACAGAGCAGCTTGCCCTGCAGCTCCTCACTGGACTCGCCGCCGCCCAGTTGCAGTC
GTGACTATGTTGACGATGTCTTGGTCACCGGAGGCGGCGCCGGTGCGGCGGAACTGTGCCGCAAACTGGAGGAGGAGCAC
CAGCGCTGCGAGCAGATTGTCGCCCAGAACAGCGCACTGCGTCAGCAGCTGGAGGAGTCGAATCGCACCAACGAGGCGCT
CACCAACGACCTACAGAAGCTGACCAACGACTGGGCGAGTCTGCGGGATGAGCTGCTGATCAAGGAGGATGAGTTCAAGG
AGGAGGAGCAGGCCTTCAAGGACTACTACAACAGCGAGCACAATCGCCTGCTGAAGATGTGGCGCGAAGTTGTGGCCGTC
AAGAGATCCTTCAAGGAGATGCAGACGGCCATGAAGGCGGAGGTAGCCAAGATGGGTCAGGAGATCAATTGTGTGGGCAA
GGACATCAATGGCTCCAACGCAACGGTCGCCTTTGCCGTCCAGCAAGCCAAGCGGGCTGCGGATGATGAACTGAAGCAAT
CGCAGCGCAGCAACGATGAACTCCAGAATCAATTGGCCACCCTGAAGGTGCAGTACGAGAGTGCCCGGCACGAGATCATG
GAGCGGGATCAGCGACTACTGGAGCTAATGAATCAGTTGAAGAAGCTGGAGGATCGCTGCGCCCAAGCCGAATCCCAAGC
AGCTCTGGCCAGTCGCTATAGCGACGAGATCGAGCGACTGAACAATTCCATGCGAGAAATCGCGCAGGCCGTCGTTCAAG
ATGCTGAGAACGCAGATCGCGAAGCAGACGCCGAGGTCACCGGCGGTGTCATGCAGCACATGCACCTCACGCGTGACGCC
GCCTCTGTTGTGGGCGGAGCAGGTGGAGCGGGCAGCACCGCCGGCGGCGGAGGGAAATCACCGCGTCGCAACTCGACACG
CGCCTCTCAAGCCTTCGCCGAGGGCACCATCTCAGCCGTCCAGGCGGCGCTCCACAAATACCAGCTGGCCCTGCACGACA
TGCAGGTGAAATTCCAGAACACCAGCGAGACCCTGCGCACCACCAAGGCCCAGCTGGAGACCAGCGAGGGTACCAAACAG
CTGCTGACCACCAAGATGCAGCAGCTCACCGAGAAACTGGACAGCAGCAACTCCAAGCTATCGGAATTGCTGCAGGAAAG
GGAGAGTCTGCAGCGCGGACTGGACGATATCCGTGTCCAGAAGCAGCAGTCTGAGATGGGACGAGCCGATATCAATAGTG
CGTTCGAGAATCTGAGCAGTGATTATGAGAAGATGCAGCTGAACTGTGGTAAACTCCAAAAACGTATCGATTCCATGGAG
GAGGACAAAAAGGCAGTGGAGCTGGAGATCCAACGTATACTGAAGGACAAGAACATAACCGAGTTGAATTTGAGGTCTGA
GGAAGATCGCAGTAGTCGTTTGCGGGAGGAAACCATATCCTTGCGCGAGGAGCTTAACCGAGTGAGCCTGAATCGTGATC
TTCTCGAGCAGCAGCGCATCGAGTCCGATAATTTGATCAATCTGCTCGAGAAACAGAAGTCCGACCTGGAGTACGATCTG
GACAAGCTGTTGCTGGAGAAGTGCGATCTGCAGGAGAAGCACGAGAAGCTATCCAACAATAGCTGCTCCACCAGTGATGA
GCTGAAGAGCGTTCAAAATTGCCTTCAGGAGGCGCAGGAGGAGCGCAAGAAGCTCCGTATTCAGTCCGTCGATCAGTGCA
ATGAAATCGGAGAGCTTAAGAAGGAGCTGGCGATACTGGACAAGGCACGACTCGAACTGGAGACGGACAATCTGTCGGCT
GGGGAAAAGCTCAAGTGTCTGCAGCTGGAGAAGGAGAAAATTCTGCAAGACTTGGCCTGCGTCACCCGGGATCGTGGTGA
CATCCACAATCAGCTAACGGCGATGTGTCGCAAAAAGGAGGCTCTGAATGAGGAACTTATGCGGACTCGGCAGCGTCTGG
AGCAAACCACCGAGACCAATAGCCGGCTGAATAGAAATCTGGAGGAGATGGTGAAGGATGTGGAGGAGAAGCAAGTGGTC
ATCGATCTGCACGAGAAGGACACACATCGCTTGAACGAACTCCTGGCCGCCCTGCGTTCGGAGAAGGAATCCCTGGAATC
GGTGCTCTTCGATACAAACACCTCACTGGAGGCCACCGAGGAGCGACGCAGTCAGCTGGAGCGGGATCTGCAGGAGGCTC
TGGTGCGTGAGGAGAGCCTAAAGAATCATGTGGCTCGCTTGCAAAAGGAGCTGGAGCAGTGTCAGCGCAAGGCCCAAGAG
ACCAAGACGCAGCTGCTTAACGCCGCCCGTGCGGCTGAGAGTGACTTCAACCAGAAAATCGCCAATCTGCAGGCTTGTGC
AGAGGAGGCGGCCAAACGACATGGCGAGGAGATTCTACAGTTGCGAAATGCCTTGGAGAAGCGAATGCAACAGGCTCTGC
AAGCGTTGCAGACGGCCAAGGATGATGAGATCGAGAAGTTGCAGGAGCGTCTGGCCACCTTGCAGGCGCATCTCGAGAGC
CTTGTCCAGCAGCATGAGGAGGCACTGATTCGGGCGGAGAGCGAGAAGCAGCAAGCCCTTTTGATTGCCCACCGGGATAA
GCAAGCGGTGGCCGAGCGTTTGGAGGCCGTATCCCGGGATCTCAAGACCGAACAGGAGTCCCTCGACCGGAGCAGACGGG
AGGCCAATGCGCGCGATGAGAAGCAGAGGGCTGCCATTGCCCAGCTGAAGGACGAGATGGTGCAGATGCGCACCAAGGAG
GAGGAGCACAAGATTAAGTTGGAGGAATGCATCCGGAAGCAGGAGCTGCAGTTGAGCAGCTTGCGCGAAGAACGCGAATC
CTTGTGCCGTGTGAGTGAGGAACTAAAGATGGAGATTCGTCTGAAGGAGGACAGAATGGAGAGCACCAACAATGAGTTGC
AAGATGCGCTGCGCAAGTCCAAGGAGGGTGAGGGCTTCATCGATAGCCTGCGCAAAGAGTTGACCGACTGTCGCCGCCAA
CTGGCGGACAGCAACATCGAGCGGGACAAGTATTCCGGCAGCAACAAGGAGCTGCGCGACCACGTCAAGCGTGTGGAGAG
CGCCAAGCGGGAGCAGGCGCGCGCCATCGAGGAGGCTCTGCAGAAGATCAGCAATCTGGAGGATACCAAGAACTCGTTGG
AGAACGAACGCACTCGATTGAGCACCATACTGAAGGAGACGGAGAATCACTTTACAAAGACCACCCAGGATCTGAATGCT
ACCAAGGCGCAGCTGCAGAAGGCTCAAGTGGAGTTCGCCCAGAAGGACGAGGGCGGCAAGGAGTTGCAGTGCAAGCTGGT
CGCCGAGGTGGAATTGAAGGAGCGGGCACAGCAGGAGCTCTGCCAGATTAAGAAGCAATTATCGGATCTGGAAGCCAATC
TGTGTGCCACTCGCCAGGAATTGGGCAGGGCTCGGTGTCAGAACAACCAGGAGGAGCATCGCTTCCATGCCAGGGAGCAG
GAGTTGGCCCAGCGCTTGGAGGAGGGTCGTGGTAGGGAGAAGCGCCTGGAGGATCAGAAGCACAACCTGGAGGTCTGCCT
AGCCGATGCCACTCAGCAGATCCAGGAGTTGAAGGCCCGTTTGGGCGGCGCCGAAGGTCGCATCCGTGCTTTGGATGAGC
AGTTGTCCTGCGTGGAACTACACAAGCGGGATACCGAACAGAAGCTATCCTCGGTGGTTCACACTCTGCGCCGGATTGCT
GGCATCCAAGTGGACGGCAGTGTAAATTTGTCTCATCGCTTGCTGAGTCCCTCGCGAAGATTCAGTCCGTCTCGCAGCTG
CGGAGACTATGACAACAGGAGCACATCACAATGCCCAGATGGACCAATTGATGTGGACCCGGATCTGGTTAGGAAGGGTG
TCCGCAACCTGATGCATCAGGTGGCTCAGTTGGAGCGCGAGAAGGATGACTACAAATCCCAATTGGGAGCAGCTAAGAAG
CAACTCCAAGATGCTGCTGACCAGCAGCTACGATGCGATGCCAAGCTGGGCAAACTGCAGGCCATGCTAAGAAATCTCCA
AGAGGAGAAGAGCAATCTGGAAACGGACCGCAAGATGAAAATCTCCGCCATCCAGGCGCTAGAGGAGAAGCTCAAGCATC
GCAACGATGAGTGTCAGATGCTAAGAGAACGTTTGGCCCAAACAGAGATGCAACTGGCTGCCACATCCGAGGAGAATGGC
CAGAACGAGGAACGACTGGAGAAGAGCCGACAGCAGTGCTCCAAACTGGACAATGAGAAGCGCCAGCTGCAGGAGGAATT
GGCCAAGGTTGAGGGCCGGGCCAGCAAACTCGAACTGCAGCGTGTTGCCATGGAGGGCGATCTTACCAGGCTACAAATGG
CCCTACAAGAGAAGGACTGCAGCATTCGTCAAATGGCTGAGCGGCTGGAGAACCAAAACCGTGCCTTGACCCAATTGGAG
GATCGCTGCACCGCCCTTAAGTCCACCGTCGATCAGCTGAAGGAGCGCCTCCAGAAGTCCGCTGTGAGTGAAACCCAACT
GCGGGGCGAGATAAAGACGCTCCAAAAGGAGCTTTCCGAGCAGGGTCACTGCTCCCAGGCCAACGAGGATAAGCTGAAGT
TGGTGCAAAAGTCTCTGCAGACCGCTGAGAACGAGAAGCGCATCCTCACCGAGCGCCTAGATAGCGCTCAGACCAATCTC
AACGAGCTGCGACGTAGCCAACAGGCCCAGCTGGATGGTAACCAGCGCCTGCAGGAACAGGTGACCGATCTGGAGGTTCA
GCGTTCGGCACTGGAGTCCCAACTTCGGATTGCCAAGTGGAACCAGGAGAGTGGCGGCGACAAGGATCTGACAAACGGCA
ACGGAGGCGGAAATGGCGAGGAGGAGCTCAGCAGGCAGCTGAAGTCCTCGCAGCGGGAAAAGTCGGAGCTACGCAGCAAA
CTGCAAACCCTACAGGACAAAGTCAAACAGTTGGAGTGCGACCGGAAAAGCAAGTTTTCGGGTGGAAACGCCTATGATCG
GGCTGAGAAGTCCAACTCCTTTTACGGTGGCGCAGCTGAATCCGGCGAGTTCGACTCCAATCGCTACGATGTGGGTGGAG
GAAATGCTGGCGGAGGCTCTTTCAACTGCGGATTGGATCACAGTGTAATCGAGCAGGAGACGCGCGATCTGCGACTCAAG
GTGCGCCGCCTGGAGACATTGTTGGCGGAGAAGGAGTCCGAGTTGGCGCGCTGCAAGGCGCGAATGAACGACAGCGCCAA
GTGCCATGATGGCTTAGATGGAGATCGTTATCGCAGTGCTCAGATGCACGCAGAGAAGCTTCTTGACGCCAGGGAGCAGT
CGCATCGGCAACAAGTGCTGCGCCTGGAGAACCAGATCTCAATGCTGCGCGAGCAGTTGGCCCAGGAGGCCAAACGGCGA
CAGCAGTACATTCTACGCAGCTCGAAGGCCAATAGAGAAATGCAGCATCTGAGGAGCACCCTAGGAGATTCCCTGCGCAA
TGTCTCCCAGCACCCGGTGGATCCCCATCTCTTGGAAAGCGAGAGCCGGCGTCTCGACTCGGCCGTTTCAATGAGCCTGC
CACCGTCGAGCTGCCGGGACTATGATCGCGATTAGAGTGATGTGAAGTTAAGATTTGGTTAAATTTGATCCCGCCAAGAA
GACGTAACGCTCACTGCCATTTGCATTTATTTAGAAAAAGGCTTCCTGGAGTCCTCCAGACGCATCTGAGTTAATCATCA
CGTGCATTTCAACTCGTTTGCCTTAGTACAATTCTAGCTGTTCATTGTCTGCCCTGTTAGACAATCGAATATAGTGCGTT
CCATCCAGTCGCAGCGATGATGCCATCCTTACATCTCCACATAAATATCTATGCATTAATGGGTCACGAGTTCCGATTCT
CCCTGAACGTGGGAGAACACCGAACTATATATCACACGACAATTAACATCATTTGCATTTACACATTGGCCAGAACACCG
AACTAGTCAGCACGAAACAAAGCAACTATATTTAATACTTAGCATATTTAATCCTATATACAGTGCGGTTTGTCGACTGC
ATTTTTATAAAATATATACAAGCGAAACACACTCCTAATGAACAC
        Other Products of this Gene
        Other Transcripts
        Name
        FlyBase ID
        Length (nt)
        Root-RD
        FBtr0304161
        6731
        Root-RE
        FBtr0339244
        7040
        Polypeptides
        Derived from THIS transcript
        Name
        FlyBase ID
        Length (aa)
        Root-PF
        FBpp0308352
        2048
        Derived from OTHER transcripts
        Name
        FlyBase ID
        Length (aa)
        Root-PD
        FBpp0293091
        2048
        Root-PE
        FBpp0308351
        2048
        Comments

        Transcript terminates at site supported by polyadenylated cDNA.

        Extended 5' UTR based on RNA-Seq and/or EST data.

        External Crossreferences and Linkouts ( 1 )
        Crossreferences
        RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
        Synonyms and Secondary IDs (2)
        Reported As
        Symbol Synonym
        Root-RF
        Rootletin-RF
        Secondary FlyBase IDs
          References (0)