FB2026_03 , released September 17, 2026
Transcript: Dmel\lncRNA:CR46006-RA
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General Information
Symbol
Dmel\lncRNA:CR46006-RA
Species
D. melanogaster
Annotation Symbol
CR46006-RA
FlyBase ID
FBtr0347136
Feature type
Associated gene
Evidence Rank
Length (nt)
8869
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 0 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        Contained within the annotated transcript, internally consistent
          End(s) extend beyond the annotated transcript, internally consistent
            Sequence
            AGTTTGCCCGCGTCGTTCGCCTTGAACAGTGAGAGAAAAGCCGAGACAACTGAGAGGAAATCGGCTTTAGAGAAAACCAG
            CAAAAGAAATAGGAAAGAGTGCTGGGGAAAAAAGGGTTTTTCGGGATGAAAGTGTAAATTTTCCCAAAATTCTCGATTCG
            TTGTGCGTTTGTGTGCCTCCTCAAGAGTTTCAATTTTTATGGAAATCTGTGTAATGTCATTGCGAAGCAAAAAGGACAAT
            TGATAATGAGTCATTCGAACGGAATTCGAATGGCATTTCAGTGGCAAAAGGCCAAAAGGCAAATTAAGTGCTCGCATTGA
            TGCTTAATTAGGAACGGGGAATTTTTATAGGTTTCGCATGGAATTTAAGAGAGGGAAAATCACAACGACTTCTGGGTACC
            CCCAAAAAGGCAGACGTCAGTCGTAACCGTACTCTGTGCTAGAGCGCCCAAACCCCGGAGAGCCAAAGAAACCGAAGACC
            CCAAAGAATTGGAAGAGGAACTCTGTGGAACCACAAAGGCAACATGTTGCACATGCACTCGCCAAAAGCAATTTGCATAC
            AAATGTTGCCAACGCACTTCAAAAACTGCACAATCACAGGGGGGGGGGTTTATTTTTTTGGTGGCGGTGGGTGGGGTGTT
            GCAGCGGAAAAGGGTAAAAGCCGCTTCATAATTTGATATTAAACATGCACGCGTGTCTCCTTCTCTTTTACTCGCATATG
            TGCAACTTGTAAATTTGCAAATTGCTAAAACGCATGACAGGAACAAAGGGCGAGGATCTTAATGGCGGGGAAACTGGGGG
            CAGACTATCGGGCAGCTGTGTGAATTTGCATTTACATCAAGGAATCGCAGGAAAGGAAAAGAACTACAAAAAGTTACCCA
            AAATTCAAGAAAACTGAATAAAAAAGATGTGCAGTTTGCTCAATTGACTTTCAATTGCAAAATATACAAAATGCATTGGG
            AAAAAGAAGTAGAGCTCAAGGCGAAAAGAAATTTTCGATTTGGTCCCTCGATTATTTAAAATCACCTGTCTGCGCAAAGT
            TTCCTAAAATTGTTTGTTTTAAAGAACAAGCTGTTCATATTTCTTTAAATATTTTAGCTATGCTAATCAGTTTTTTCCAG
            TGCCTCTTTGAATAAAAAAGGCAAGCCCAAATGAATTTATTTTCAATTTTATTTTCAATCTGCTTTGTGTCCGTCATATG
            ATTGACATGGTCGATTGAACTGGCAAACGAGCGAGGGAGTGGAACGATACACATATCGTTTATTTTTGGCAGCAAGTGTT
            TGCGTTCGATTTGCAGTTTTGTTAATACTGCACTCGAAAATACCCGAGACACCTCCTTAAACTCAAATCCAAAATGCGAG
            GGCTCTTGAAACCAAAAATCTCCGGAGTCTTAATAAGCTGCTTGCAAAAAAGAAGTACACACTTTTTATATCAGATCTGT
            ACACGCAATTGAGTGTACATACTTCTTTTTTTTTGTGAGTTAACACGTCTGTGTGTGCATATATAAATCATATTTATGAG
            ACATTTCCCCAGCAGGGAAAATACGAAATGGAATAAAAAAAAAAAACGTATGAATGTTAAATAGGCACGCAACGTGCGAA
            AGGGATGGCCACAAAATGCGTCACTCCCCCCATTCGCCTGACTTTTCCTTAACGAAGGAAAACAATAATCAATAAGTAGT
            AATACAACGGCCGACAATTGTGGGGAAACTCACCCCCGCGACTTAGTCGAATTTCCTCCCTCTCGCTCATATGTGTTAGA
            ATTTTTGTAGCCTGGGTAGTTCATAACTTTTCTCTCATATGTGTGTGTGTGTGTGTGTCTGTGGTGGTTTTCCTTGGTTC
            TTGGCCAGGACTTCAGGCGTTTGACAGCCATGTTTGTCCTTCGCACATGCACACACACACACACGCCCACACATGATTGT
            AGGCGTCTCCTTGTGGCGGCAACCCCCCCAAAAAAAAGCAGGAAAAAAAGAAAAAGTGTGGCGGAAAAGTGTGCCACAAA
            CTTTTCGCCCGAAAAAAGTTTGTCTGCTGACACAGATCTGTGTGTAAATGAGCGAGATAACAAACATTTGCAAATTTTCC
            AGACAATACCTCTTTTTACACTCTAATCGTGCACATAAAAAAAATAATTGAATTGCTTCCGCTAAATAATCTTTTTTATA
            GATTCTAATTAAAGCTTTTTTATATTAATATTAGCTTAATATTTATATACAAACATTAACTGAAAATTGCTTATCCTTAT
            AACCATTGATGGTTTAGAATGTGCGTTTTTAAAATGTATTAATTCAGTTCCACATTTTTGCTCTGAGTGTAATCAACCTT
            TTTTTTTGGCTTGTTAAAGAGTTGCCGAAAAACAAATTGGAAAAATTTGGTTAAACTTTGGGTTCGTTTCAGTTTTGGGC
            TCAGCTGATTTATTGTCATAAATTTCATTGAAATTCATGAGGCTCTTGGAAGAACCTCAAAAATGTAAAAAACTGGGCGT
            GGCCTAAATGATGTCCGCGTGTGCGTGTGTGTGTGTGTTGCTGCGCCTACGCAACGGCCCAAAAGATTTATTTCAATGGA
            ACGAAGAAATTATAATATTTTCTAACTTCTATCATGGAAAAAGAAATATAAAAGAAATATGTACATACAATTCTGTGGGG
            CGATTATGAAAAGAGCTGTTGATGTATGAATTGTATGGGCCTCTCATAAATCTAGGGGCCCTGTCAAGGTGTCCAATACG
            TTTTTCTGGCCTGTCCGTGTGTTTGTGCCTCAAGTGGCAGTCATAAATTTGAGATTTATGTTCATCTCTCTTTTCGATTT
            TGTTGTTTTTTGGTTCCTATTTTTTTTTGTCCATTTACCATTTTTTCGGTTTTGGTCAAGAGAACCTGGCACAAAGCACA
            GTTCTTTACTCGGGCTTGTTAATTAAATGCGATTGCATCATCGCATATTTCAGCTGTCCATCTACTGTGCACAATGCGGG
            TTAAGTAAATACATACACCGATGTATTTGGTATATATAGATTACTTCGCATTTTTATTTTTCACTTGTTCCTATAGTTTA
            CTCTTGTTTGTAATTATGTTAAAAAAGGATTTAGTTTGGTTTTTTCTGGAGTTAATATTATTAATTTGTTGGCCCTTGCT
            GTATATATCTTTATTTCATTTTATCAAGCTATGACTGGACAGAGATTGTCGCTAATCGCCGCTCATGTACCCCAAGACAT
            GCCGCATTTGTCTTTGTCTTTTATTTTTCGGCTTTGTCTGCTCTGACACATTTTTCTTATGAATTTTCAGTATTTTCCCC
            CGGACTCACTAATTTTTCGTGGCGTGTTTGTTCTGACCGCCAAAATTGCTTGTCCAACATTTGTTGAACATGTTTTTGTA
            CTTTGTTTCGGTTATTTTTTTTTAATATTTTTTTTTTTTATGTGGGGAACCAACAACGAACTACACGCAAGTGCTGAAGA
            TTTTCAGGCAGATCCGTTAAACATCAAAATCAACTTTTTCAAGCTCATTAAACAACCAGGGAAAAAAAGTGAAATAAAGC
            CAAACGTTGACCTTCAAAAACGCAACGCAACCAAGCGAAAATGGCAGCAACAAAAACAAAAATGATTAAATACATAATAC
            GAAAAATAACAAAAGTCAGAGCCGCTTGGAAACAGGTTGTTGTTTCGCTCTCTCTATTGTTAACATTTTATTATGCTTTT
            TTCAAGCGGAAAGCAACAAAAGGCCCCAAAAACTCTTGCAATTTTACGATTATTTACGATCGAAATACATTTCTCTGCCG
            ATTTTTGACCTTGCAGTTGTTGCACTTAACACGTGCCAGAAATTGATAATGAAAGAACGCGTTTTCGGGTGTTAATCACA
            CTTCGGGCTATAAAAAAAAACATGCGAAAAAAAGAAAAAAAAAACAGCTCTCTCAAAAAGTAAAGCCCGCAAAAGGCGCC
            AAAAATATTTCGACGACGAACGACTCAGACTAAATTTAAAGTCAGAAGAATCGTTATTTGTAAAACTACTTGTCAAATAC
            CCTTTTGGTAAAATCTTGAGATTTGGAAACTTTTTTTTTTTTTGGATGTTTTACAAAACGCGCAAAAATCTTTAAATAGT
            GTACATAATGTATGCATATAGGTACATATTGAGAACTTTACCTTTTATATATGTATGTACATATAATCCACAAATTTACA
            GAAGTATCTTTACCATACCCAATAATACTCTATATACACGAAATATTCTAATCATAAATGGACGTTTGCCGCGATGACGA
            AGACTTTGCCTATTGTAGATTTTTATTTGCCCATGGTTTGTGTTGCTTTTGTTGTGGGCACTTCAAAAGTCGTGTGCGCG
            TTGTTGTTGTGTTGTGGTGTTTGGTTGTTGTATATCGGTTGTTTACTTTTACGGTAAATGCGAAAAGCAACAACACTAAG
            GACTACAAAAAAGCGCGCGCTCGTCGCGCGTATCTAGATAAATATCTGTGAAAATACACACTTGAGGCCAAGATGCTGCA
            CAGTGGGCGCCATAGAAATACGGCACTATAGAAAAGTTTTAGGTGAACTTAGCATATTCTCTATTAAAGGAAAGAAAATT
            ACACATATTCTACTGATGAAACTAAAATTTGGATAATATTCAATTGCTTGCTGTTAGTTCAAAGATTAAAAAGTGAAATA
            ATTTTTGGTGTATAATTGTGTGAGTAAACAATGAAAAAGCGTGATTAATAAGTCTAAATTCTATGCATATTGAGACAACA
            GTTTGGTTCTAAAACGCACTTATTACATTAAGATATGTTTATGAAACAAATTTTCTTTTCTTTTTATTCTCTGAATACTT
            CCAATATCGTGACCTCACCTGTTCCTGGTTTTCTTGCTGCCTTTTCCAGCGGAGGCAACGACCAACAATAACAACAAGCA
            AAGAAGACGCAGCGCAAAAAAAAACAATCGTAAACAGATCATCGAACTCAGCCGCTGTGTTGTTGCTCCTGTTGTTGTTG
            TTGCTGTTTGTTGGCTGCCGTTGGCCTTGATGTGCCTCAAAAATTATAGTTTTTTTTTACGGTGCAAGCTCTTTTTTTGT
            GGCTTAAAACCATTTAATTGTTTCATTAATTAAAAGTCGTTTATTTAGATATTTTTTTTTTTAATTTTACTGCCGTTTTG
            GTGATATTAATAGAGTTGACAAAGCGTTCGGCGCCCACGCAGCAAGCAGCGACGTTGACGTCGGCAGAGCTGCTTTCACC
            GCTGCTTGCGTCATGTTGGGCGACAAAGCTGCAACGGCGACAAAGCAGCAACCAATATGCAGTTGCCATGTGAGGGTGTG
            TGCAATGCAGCCGCTAAATGTGTGCAATTCACCACTTGAGAAAACCACCACCGCCGAAGCAAAGAAACCCACCACGGCAG
            CGACGTCGAACATCGACGAACATCGTCGAACATCGCATTTCGAGTTATTTTCTGCGAGACTTCGCTGCGTTTTTTTCAGT
            TGAGTTCCGGAGCTCCAAAGTCGCGCATCAATCGCTCGCAAACAGCATCGTGTTTTCGCATTCGCGTGACTTGACAGAAA
            TTCGTAAAAATTGAGAAACAATTTACAAGTGATGAACAAAAATAAACTTAAACTTTTAAGTTTAATAAAACCATCAAATA
            ATACACAGTTTCGGAAAAAGATAATACATTTTAATGAAAATCTGAAAGCAAATAAATTTTACAAAGTTAATGATTAAAAA
            TTAAACAAACCAAAAAACATAAAAGACATAAATAAATTCAATTCAAAAATTCTTCTTAATATCTAACTGATATTTATACT
            ACGCAGACGAAATAAATAAACATTAAATAGCTTATTTTTGGATGAAATTCTTATATTGGAACACAAAAAGATCAAAGTTT
            TCAAAAATTTCTAAAGGGAAACTCTTGAAATAAACTTGCTATAAATATTATATTTTCCATGCCTTACTGGACACATTGGT
            CTATAAAGTAATTTATTTTTCCTCAAAAATATTGTATATCCCTTTTTTCGATAAAGGAAACCTATAATATTTTATTTTTC
            TTACTTCCTATTTTAAATTCTGTAGAAAAGTAAAAAGCGTAAATACGGTTCTTAAAATCAAAGAAAAAAGTATAGCATTA
            TTTCCTTAAAAACTTCCCATAAATAAATTCTTAAACCTGAAATAATATACATATCTAATGAAAAAACTTTGTCCAAACTT
            TCCATAGATATAATTCTAATAAATAATAATAGTAAAACGCGCACAAACGCGTCCATTTCCAGATTATTAATAATGATTTG
            AAAAATATTTAAATTCAATCAAACAAAAAGTCTATCCAGCAAAAAACGCCAACCCAAACGCCGAAAAAAAAAAACAACAC
            TGAAAAAGCTGCCAAGCGAGAAACGACGGAGGACCATACCATATATAACCCCTATATATAACCGTCGTCGTCATCATCAT
            CATCAAGCTAGAAATTCCCCCAGCACAAATCCCATGAAGAGAATCCCATCAGTCCGGCAACAACAACAACAACCAAGAAA
            TACTACAGAATAAAACCAAAAAAAAAAAAAAATGAAAAAAAAAATCTGAAAAAAAGAGTTGGAATTTTTGTAAGCTGGTA
            TGTGAGCTGTTGTTCGCCTCTTTTACGGTTTGAGCTCGAGTTTTGTGAAAAAGAAAAAGGGAAACGCGCTGCCAAGATAT
            TTTTTACCTGGTTTTTGCCATCAGCGAGGTATAGAGTTCCTACGTTCATTATAAACTCGTAGGAACTTCATACCGTGCTC
            TTGGAAGACCAAAAAACAACCAAGTGAATGCAAAAATCCCAAAAAGTATGGCGAAAACAAACAAAAAGTGCGTTTTAAAA
            CGATGAGAAAACGCTGGACAAACGAAAAGGAAGTTGCAAATGATGGGAAAGTAAGAGTTACTACTAAAAATGTTGATCGA
            AATTCAGTAGTGTGTTTGCCCAAGTTTATTATAGTAATTTATGGCAAGATCATAACACAAAGCTGCTCATTAAGAGCGAA
            ATGCGATGATATTTGGTTGGTAAGAAGTAAGGCAATGTTATCATTATTTTTATTAAATGTATATTTAAAAACTATCTTTG
            CATGAATAAACTTGATACTTGATAGCTAAAATTACAAAAAAAAAACTTTTAATATTCGATCGTCATTTTATGCCTTTTCT
            ATTGGCGATATTATGCTTTTAACTTATCCATTAATTACATCAGTTAGTGAATAGGAAATTACTTTTAATAAAAACCGCAG
            AGTGCGATTAAAAACGCTATAAAAACGCGCGCGAAACGCATACTACACTCCATGCGTTTGTAGAAAAAAATGATCAAAAT
            AGAAATAACATTTAAACCTAACAAAAGTATTAGAATTATGTTAAAACTTTTCCGCTACAAAAAGAACTTGAAATGCATCA
            GAAACTGATCGAGATACTGAAAACCAGCTACCGATAAGATATGGAAAGGCAATTCTGAGTGACTAATTCCAAGTAAAGGG
            CGATTGAGGTGCGGTTAATCCGAGCCACTTAAAAGCACTTGTCATAAATTAACAAACGTTATTTCTAATCTAACTAAATA
            ACAATTTCAATTAATTGCCACGTTAAGATAATGTTGGATTTGTGGATGCTCTGTCCCGCTCTACATATTTACAAACGTAT
            AGCCATCTCTTTCACCGGCTAAATGGCATCCACTTTGAATTTGTTAGTTGGTAAAGCAGCTAATGGCAATTGTTTTCTTC
            TTGATTGGTGGTTTAGTACGGGGATAACTGTTTAAACGTAATTTAGTAATGGAGATTACTTGGAAAGGGTTTCAAGAAGC
            ATATTTATAGCATGGCATTTCTACATGAAAAGTTTTCTACAAGAAAAGTTTTCTACTTGCTTGAAACGTAAACATTCCAT
            ACGATATTTGTGAAGAATTTCTCGGACTTGGATACCAAAATACCACAAAAACCATTGTCAAAAATCATTAAACACAATAT
            GACTGTCGACTGTCTGGACGACAAGATATGGAGTACAAACGGACTGAACACAGTCGATAGGAGAAATGCATGCCATTTTT
            ATTTCATTTTATTGTACTTATTTTTCGCTATGCCCGATAAGCAGCAAAATAAAAAATAATAACGCAAACGGCACACACAC
            AATTTGCAGTGACACACCAAAGGCCACAATGATAATTTTATCAACTCGAAAAAAAAAATGTATATGTATTTAAAACGGAG
            GGAGAGAGAAAAATATAAAAAATATATATTTGCTTTATCGTGCAAAAATGGGAATGAAACGAGCAAACGGCTTCCTTGTG
            GCTTTCGCAATTTTCGCAGCATATTTGCCACTGTCAGTTTGGCCAAAAGGATTGTTGGCCAGGCCAGCAACCAAACGGCA
            GCAGCATTGCACCGCTGATTTCAACGCTTTTAAATTCCTTCACTTCTGCACTGCTGTTGCAGCAGTTAATTTAATTTCAG
            CTCATAAATCAAAACTGTGCCGCGCAACAAAATGTTTGCTTTTGACGCGCCGTTTTTGTCGCCAGACTACCGACATCACT
            GGACATGGACGTGGGACACTGGACAAGTGGAACGGACATGCAGGACGGCAGCTGGAGGATCGGGAGTAGGAGCATGCCAA
            CAGGATCTGGAGAGCTGACTAAGTCCGATTCACAGCCACCTGATGTTTGGCAAACAGCGACAGAATGTAGCCGCAATTGG
            CTGGGGAATACTAATGAGCCAATTTTCTAGCTGCCACAGCAAAATAGCGAAAATTAATGGCTTTGGTAAAAGTGATAGGA
            AACTGTAAAATTCGATTAATTATATCAACTATAAAGGACTAATACCAGATATAGTCATAGTCTAGATTATGATATACATA
            TATTGTACTATTTCTATAATAAATAGATTATTTTCAAAATGTTCAAGCTTAAAATGTGTTTTGTAGTAC
            
            Other Products of this Gene
            Other Transcripts
            Name
            FlyBase ID
            Length (nt)
            FBtr0347137
            9895
            FBtr0347138
            9396
            FBtr0347139
            8838
            FBtr0347140
            3432
            Comments

            Transcriptional initiation is supported by RAMPAGE TSS data (FBrf0220331).

            Transcriptional initiation is supported by short-capped RNA data (FBrf0209722).

            External Crossreferences and Linkouts ( 2 )
            Crossreferences
            RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
            RNAcentral - A comprehensive ncRNA sequence collection representing all ncRNA types from a broad range of organisms
            Synonyms and Secondary IDs (2)
            Reported As
            Symbol Synonym
            CR46006-RA
            lncRNA:CR46006-RA
            Secondary FlyBase IDs
              References (0)