FB2026_03 , released September 17, 2026
Transcript: Dmel\lncRNA:CR46006-RC
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General Information
Symbol
Dmel\lncRNA:CR46006-RC
Species
D. melanogaster
Annotation Symbol
CR46006-RC
FlyBase ID
FBtr0347138
Feature type
Associated gene
Evidence Rank
Length (nt)
9396
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 0 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        Contained within the annotated transcript, internally consistent
          End(s) extend beyond the annotated transcript, internally consistent
            Sequence
            GCAGTTACCCGCCAGCAGCCGATGTCGCCAGTTGCCAGTTGCCAGTTGCCAGTTGCCAGTTGCCAGTGCCCAGTAACCAG
            TGGCCAGTTGCCAGTGCCAGTTGCCACGAATAAATCTTAGTCATCAGCAGACTGGCCAAGATCAGCCGCCGTACACACAT
            AACTCGGTCTAAAAGCCAGAATCCAGTTGTTGCTATTGCCTTTGCTGTTGCATTTGCTGCCTGGTGACACTTGCAGACTT
            TTTGCAGCGGAACCACGACGACGAGACGTCCAGCAAAGTTGCATGGAGCTGAATTGATTTATGGCGTAAATTTTATTGTC
            TGGCCGGGAACTGAAACTGGAACTGGACTGGAACTCCTGACCGACCGACCAGCCAGCCAGCCAGCCAGCCAGCCAGTTGC
            TAGTCGGTGGCTCTTAACTTGTTAGCCACTAACTGTAAAGCCTCGAAAGTGCCTAAGTGTTGGTGAATCGTGCGCGTGTC
            ATGTGACATTGACTTTTAGTCGGGTGAAGTTTTCCTCCATAACCATACCCATATCCCCAGCCCACAACATATCACATCCA
            TATCCAACTAGACGTATAGTATGGTACGTCCACGCCAAACGTGTACAACTTTGTGTATAAATTATATTATAAAACTGAAA
            CATAAATTGCAACTTAACAAACTGTAACAACTTTCGCTTTGGACCGCAAAAAGAGAACAGAACCATGCTGTGGACAAAGT
            TTGCCGTGCATTTGTTGGGTCAACACAACAAGTAAGTTTTAAGCGACACGTTTATTTCTCGCAAATTGTTAAGTAAACAG
            AATGCTTTTGAGTTCGCAACTTGGGCATAATATTTTTCAAATCATTTCTATTTAATTAATACAAATGAAAGACTGCATTC
            AGTTTGTTCTTTTAACTTAGGGAAAATCACAACGACTTCTGGGTACCCCCAAAAAGGCAGACGTCAGTCGTAACCGTACT
            CTGTGCTAGAGCGCCCAAACCCCGGAGAGCCAAAGAAACCGAAGACCCCAAAGAATTGGAAGAGGAACTCTGTGGAACCA
            CAAAGGCAACATGTTGCACATGCACTCGCCAAAAGCAATTTGCATACAAATGTTGCCAACGCACTTCAAAAACTGCACAA
            TCACAGGGGGGGGGGTTTATTTTTTTGGTGGCGGTGGGTGGGGTGTTGCAGCGGAAAAGGGTAAAAGCCGCTTCATAATT
            TGATATTAAACATGCACGCGTGTCTCCTTCTCTTTTACTCGCATATGTGCAACTTGTAAATTTGCAAATTGCTAAAACGC
            ATGACAGGAACAAAGGGCGAGGATCTTAATGGCGGGGAAACTGGGGGCAGACTATCGGGCAGCTGTGTGAATTTGCATTT
            ACATCAAGGAATCGCAGGAAAGGAAAAGAACTACAAAAAGTTACCCAAAATTCAAGAAAACTGAATAAAAAAGATGTGCA
            GTTTGCTCAATTGACTTTCAATTGCAAAATATACAAAATGCATTGGGAAAAAGAAGTAGAGCTCAAGGCGAAAAGAAATT
            TTCGATTTGGTCCCTCGATTATTTAAAATCACCTGTCTGCGCAAAGTTTCCTAAAATTGTTTGTTTTAAAGAACAAGCTG
            TTCATATTTCTTTAAATATTTTAGCTATGCTAATCAGTTTTTTCCAGTGCCTCTTTGAATAAAAAAGGCAAGCCCAAATG
            AATTTATTTTCAATTTTATTTTCAATCTGCTTTGTGTCCGTCATATGATTGACATGGTCGATTGAACTGGCAAACGAGCG
            AGGGAGTGGAACGATACACATATCGTTTATTTTTGGCAGCAAGTGTTTGCGTTCGATTTGCAGTTTTGTTAATACTGCAC
            TCGAAAATACCCGAGACACCTCCTTAAACTCAAATCCAAAATGCGAGGGCTCTTGAAACCAAAAATCTCCGGAGTCTTAA
            TAAGCTGCTTGCAAAAAAGAAGTACACACTTTTTATATCAGATCTGTACACGCAATTGAGTGTACATACTTCTTTTTTTT
            TGTGAGTTAACACGTCTGTGTGTGCATATATAAATCATATTTATGAGACATTTCCCCAGCAGGGAAAATACGAAATGGAA
            TAAAAAAAAAAAACGTATGAATGTTAAATAGGCACGCAACGTGCGAAAGGGATGGCCACAAAATGCGTCACTCCCCCCAT
            TCGCCTGACTTTTCCTTAACGAAGGAAAACAATAATCAATAAGTAGTAATACAACGGCCGACAATTGTGGGGAAACTCAC
            CCCCGCGACTTAGTCGAATTTCCTCCCTCTCGCTCATATGTGTTAGAATTTTTGTAGCCTGGGTAGTTCATAACTTTTCT
            CTCATATGTGTGTGTGTGTGTGTGTCTGTGGTGGTTTTCCTTGGTTCTTGGCCAGGACTTCAGGCGTTTGACAGCCATGT
            TTGTCCTTCGCACATGCACACACACACACACGCCCACACATGATTGTAGGCGTCTCCTTGTGGCGGCAACCCCCCCAAAA
            AAAAGCAGGAAAAAAAGAAAAAGTGTGGCGGAAAAGTGTGCCACAAACTTTTCGCCCGAAAAAAGTTTGTCTGCTGACAC
            AGATCTGTGTGTAAATGAGCGAGATAACAAACATTTGCAAATTTTCCAGACAATACCTCTTTTTACACTCTAATCGTGCA
            CATAAAAAAAATAATTGAATTGCTTCCGCTAAATAATCTTTTTTATAGATTCTAATTAAAGCTTTTTTATATTAATATTA
            GCTTAATATTTATATACAAACATTAACTGAAAATTGCTTATCCTTATAACCATTGATGGTTTAGAATGTGCGTTTTTAAA
            ATGTATTAATTCAGTTCCACATTTTTGCTCTGAGTGTAATCAACCTTTTTTTTTGGCTTGTTAAAGAGTTGCCGAAAAAC
            AAATTGGAAAAATTTGGTTAAACTTTGGGTTCGTTTCAGTTTTGGGCTCAGCTGATTTATTGTCATAAATTTCATTGAAA
            TTCATGAGGCTCTTGGAAGAACCTCAAAAATGTAAAAAACTGGGCGTGGCCTAAATGATGTCCGCGTGTGCGTGTGTGTG
            TGTGTTGCTGCGCCTACGCAACGGCCCAAAAGATTTATTTCAATGGAACGAAGAAATTATAATATTTTCTAACTTCTATC
            ATGGAAAAAGAAATATAAAAGAAATATGTACATACAATTCTGTGGGGCGATTATGAAAAGAGCTGTTGATGTATGAATTG
            TATGGGCCTCTCATAAATCTAGGGGCCCTGTCAAGGTGTCCAATACGTTTTTCTGGCCTGTCCGTGTGTTTGTGCCTCAA
            GTGGCAGTCATAAATTTGAGATTTATGTTCATCTCTCTTTTCGATTTTGTTGTTTTTTGGTTCCTATTTTTTTTTGTCCA
            TTTACCATTTTTTCGGTTTTGGTCAAGAGAACCTGGCACAAAGCACAGTTCTTTACTCGGGCTTGTTAATTAAATGCGAT
            TGCATCATCGCATATTTCAGCTGTCCATCTACTGTGCACAATGCGGGTTAAGTAAATACATACACCGATGTATTTGGTAT
            ATATAGATTACTTCGCATTTTTATTTTTCACTTGTTCCTATAGTTTACTCTTGTTTGTAATTATGTTAAAAAAGGATTTA
            GTTTGGTTTTTTCTGGAGTTAATATTATTAATTTGTTGGCCCTTGCTGTATATATCTTTATTTCATTTTATCAAGCTATG
            ACTGGACAGAGATTGTCGCTAATCGCCGCTCATGTACCCCAAGACATGCCGCATTTGTCTTTGTCTTTTATTTTTCGGCT
            TTGTCTGCTCTGACACATTTTTCTTATGAATTTTCAGTATTTTCCCCCGGACTCACTAATTTTTCGTGGCGTGTTTGTTC
            TGACCGCCAAAATTGCTTGTCCAACATTTGTTGAACATGTTTTTGTACTTTGTTTCGGTTATTTTTTTTTAATATTTTTT
            TTTTTTATGTGGGGAACCAACAACGAACTACACGCAAGTGCTGAAGATTTTCAGGCAGATCCGTTAAACATCAAAATCAA
            CTTTTTCAAGCTCATTAAACAACCAGGGAAAAAAAGTGAAATAAAGCCAAACGTTGACCTTCAAAAACGCAACGCAACCA
            AGCGAAAATGGCAGCAACAAAAACAAAAATGATTAAATACATAATACGAAAAATAACAAAAGTCAGAGCCGCTTGGAAAC
            AGGTTGTTGTTTCGCTCTCTCTATTGTTAACATTTTATTATGCTTTTTTCAAGCGGAAAGCAACAAAAGGCCCCAAAAAC
            TCTTGCAATTTTACGATTATTTACGATCGAAATACATTTCTCTGCCGATTTTTGACCTTGCAGTTGTTGCACTTAACACG
            TGCCAGAAATTGATAATGAAAGAACGCGTTTTCGGGTGTTAATCACACTTCGGGCTATAAAAAAAAACATGCGAAAAAAA
            GAAAAAAAAAACAGCTCTCTCAAAAAGTAAAGCCCGCAAAAGGCGCCAAAAATATTTCGACGACGAACGACTCAGACTAA
            ATTTAAAGTCAGAAGAATCGTTATTTGTAAAACTACTTGTCAAATACCCTTTTGGTAAAATCTTGAGATTTGGAAACTTT
            TTTTTTTTTTGGATGTTTTACAAAACGCGCAAAAATCTTTAAATAGTGTACATAATGTATGCATATAGGTACATATTGAG
            AACTTTACCTTTTATATATGTATGTACATATAATCCACAAATTTACAGAAGTATCTTTACCATACCCAATAATACTCTAT
            ATACACGAAATATTCTAATCATAAATGGACGTTTGCCGCGATGACGAAGACTTTGCCTATTGTAGATTTTTATTTGCCCA
            TGGTTTGTGTTGCTTTTGTTGTGGGCACTTCAAAAGTCGTGTGCGCGTTGTTGTTGTGTTGTGGTGTTTGGTTGTTGTAT
            ATCGGTTGTTTACTTTTACGGTAAATGCGAAAAGCAACAACACTAAGGACTACAAAAAAGCGCGCGCTCGTCGCGCGTAT
            CTAGATAAATATCTGTGAAAATACACACTTGAGGCCAAGATGCTGCACAGTGGGCGCCATAGAAATACGGCACTATAGAA
            AAGTTTTAGGTGAACTTAGCATATTCTCTATTAAAGGAAAGAAAATTACACATATTCTACTGATGAAACTAAAATTTGGA
            TAATATTCAATTGCTTGCTGTTAGTTCAAAGATTAAAAAGTGAAATAATTTTTGGTGTATAATTGTGTGAGTAAACAATG
            AAAAAGCGTGATTAATAAGTCTAAATTCTATGCATATTGAGACAACAGTTTGGTTCTAAAACGCACTTATTACATTAAGA
            TATGTTTATGAAACAAATTTTCTTTTCTTTTTATTCTCTGAATACTTCCAATATCGTGACCTCACCTGTTCCTGGTTTTC
            TTGCTGCCTTTTCCAGCGGAGGCAACGACCAACAATAACAACAAGCAAAGAAGACGCAGCGCAAAAAAAAACAATCGTAA
            ACAGATCATCGAACTCAGCCGCTGTGTTGTTGCTCCTGTTGTTGTTGTTGCTGTTTGTTGGCTGCCGTTGGCCTTGATGT
            GCCTCAAAAATTATAGTTTTTTTTTACGGTGCAAGCTCTTTTTTTGTGGCTTAAAACCATTTAATTGTTTCATTAATTAA
            AAGTCGTTTATTTAGATATTTTTTTTTTTAATTTTACTGCCGTTTTGGTGATATTAATAGAGTTGACAAAGCGTTCGGCG
            CCCACGCAGCAAGCAGCGACGTTGACGTCGGCAGAGCTGCTTTCACCGCTGCTTGCGTCATGTTGGGCGACAAAGCTGCA
            ACGGCGACAAAGCAGCAACCAATATGCAGTTGCCATGTGAGGGTGTGTGCAATGCAGCCGCTAAATGTGTGCAATTCACC
            ACTTGAGAAAACCACCACCGCCGAAGCAAAGAAACCCACCACGGCAGCGACGTCGAACATCGACGAACATCGTCGAACAT
            CGCATTTCGAGTTATTTTCTGCGAGACTTCGCTGCGTTTTTTTCAGTTGAGTTCCGGAGCTCCAAAGTCGCGCATCAATC
            GCTCGCAAACAGCATCGTGTTTTCGCATTCGCGTGACTTGACAGAAATTCGTAAAAATTGAGAAACAATTTACAAGTGAT
            GAACAAAAATAAACTTAAACTTTTAAGTTTAATAAAACCATCAAATAATACACAGTTTCGGAAAAAGATAATACATTTTA
            ATGAAAATCTGAAAGCAAATAAATTTTACAAAGTTAATGATTAAAAATTAAACAAACCAAAAAACATAAAAGACATAAAT
            AAATTCAATTCAAAAATTCTTCTTAATATCTAACTGATATTTATACTACGCAGACGAAATAAATAAACATTAAATAGCTT
            ATTTTTGGATGAAATTCTTATATTGGAACACAAAAAGATCAAAGTTTTCAAAAATTTCTAAAGGGAAACTCTTGAAATAA
            ACTTGCTATAAATATTATATTTTCCATGCCTTACTGGACACATTGGTCTATAAAGTAATTTATTTTTCCTCAAAAATATT
            GTATATCCCTTTTTTCGATAAAGGAAACCTATAATATTTTATTTTTCTTACTTCCTATTTTAAATTCTGTAGAAAAGTAA
            AAAGCGTAAATACGGTTCTTAAAATCAAAGAAAAAAGTATAGCATTATTTCCTTAAAAACTTCCCATAAATAAATTCTTA
            AACCTGAAATAATATACATATCTAATGAAAAAACTTTGTCCAAACTTTCCATAGATATAATTCTAATAAATAATAATAGT
            AAAACGCGCACAAACGCGTCCATTTCCAGATTATTAATAATGATTTGAAAAATATTTAAATTCAATCAAACAAAAAGTCT
            ATCCAGCAAAAAACGCCAACCCAAACGCCGAAAAAAAAAAACAACACTGAAAAAGCTGCCAAGCGAGAAACGACGGAGGA
            CCATACCATATATAACCCCTATATATAACCGTCGTCGTCATCATCATCATCAAGCTAGAAATTCCCCCAGCACAAATCCC
            ATGAAGAGAATCCCATCAGTCCGGCAACAACAACAACAACCAAGAAATACTACAGAATAAAACCAAAAAAAAAAAAAAAT
            GAAAAAAAAAATCTGAAAAAAAGAGTTGGAATTTTTGTAAGCTGGTATGTGAGCTGTTGTTCGCCTCTTTTACGGTTTGA
            GCTCGAGTTTTGTGAAAAAGAAAAAGGGAAACGCGCTGCCAAGATATTTTTTACCTGGTTTTTGCCATCAGCGAGGTATA
            GAGTTCCTACGTTCATTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAACCAAGTGAATGCAA
            AAATCCCAAAAAGTATGGCGAAAACAAACAAAAAGTGCGTTTTAAAACGATGAGAAAACGCTGGACAAACGAAAAGGAAG
            TTGCAAATGATGGGAAAGTAAGAGTTACTACTAAAAATGTTGATCGAAATTCAGTAGTGTGTTTGCCCAAGTTTATTATA
            GTAATTTATGGCAAGATCATAACACAAAGCTGCTCATTAAGAGCGAAATGCGATGATATTTGGTTGGTAAGAAGTAAGGC
            AATGTTATCATTATTTTTATTAAATGTATATTTAAAAACTATCTTTGCATGAATAAACTTGATACTTGATAGCTAAAATT
            ACAAAAAAAAAACTTTTAATATTCGATCGTCATTTTATGCCTTTTCTATTGGCGATATTATGCTTTTAACTTATCCATTA
            ATTACATCAGTTAGTGAATAGGAAATTACTTTTAATAAAAACCGCAGAGTGCGATTAAAAACGCTATAAAAACGCGCGCG
            AAACGCATACTACACTCCATGCGTTTGTAGAAAAAAATGATCAAAATAGAAATAACATTTAAACCTAACAAAAGTATTAG
            AATTATGTTAAAACTTTTCCGCTACAAAAAGAACTTGAAATGCATCAGAAACTGATCGAGATACTGAAAACCAGCTACCG
            ATAAGATATGGAAAGGCAATTCTGAGTGACTAATTCCAAGTAAAGGGCGATTGAGGTGCGGTTAATCCGAGCCACTTAAA
            AGCACTTGTCATAAATTAACAAACGTTATTTCTAATCTAACTAAATAACAATTTCAATTAATTGCCACGTTAAGATAATG
            TTGGATTTGTGGATGCTCTGTCCCGCTCTACATATTTACAAACGTATAGCCATCTCTTTCACCGGCTAAATGGCATCCAC
            TTTGAATTTGTTAGTTGGTAAAGCAGCTAATGGCAATTGTTTTCTTCTTGATTGGTGGTTTAGTACGGGGATAACTGTTT
            AAACGTAATTTAGTAATGGAGATTACTTGGAAAGGGTTTCAAGAAGCATATTTATAGCATGGCATTTCTACATGAAAAGT
            TTTCTACAAGAAAAGTTTTCTACTTGCTTGAAACGTAAACATTCCATACGATATTTGTGAAGAATTTCTCGGACTTGGAT
            ACCAAAATACCACAAAAACCATTGTCAAAAATCATTAAACACAATATGACTGTCGACTGTCTGGACGACAAGATATGGAG
            TACAAACGGACTGAACACAGTCGATAGGAGAAATGCATGCCATTTTTATTTCATTTTATTGTACTTATTTTTCGCTATGC
            CCGATAAGCAGCAAAATAAAAAATAATAACGCAAACGGCACACACACAATTTGCAGTGACACACCAAAGGCCACAATGAT
            AATTTTATCAACTCGAAAAAAAAAATGTATATGTATTTAAAACGGAGGGAGAGAGAAAAATATAAAAAATATATATTTGC
            TTTATCGTGCAAAAATGGGAATGAAACGAGCAAACGGCTTCCTTGTGGCTTTCGCAATTTTCGCAGCATATTTGCCACTG
            TCAGTTTGGCCAAAAGGATTGTTGGCCAGGCCAGCAACCAAACGGCAGCAGCATTGCACCGCTGATTTCAACGCTTTTAA
            ATTCCTTCACTTCTGCACTGCTGTTGCAGCAGTTAATTTAATTTCAGCTCATAAATCAAAACTGTGCCGCGCAACAAAAT
            GTTTGCTTTTGACGCGCCGTTTTTGTCGCCAGACTACCGACATCACTGGACATGGACGTGGGACACTGGACAAGTGGAAC
            GGACATGCAGGACGGCAGCTGGAGGATCGGGAGTAGGAGCATGCCAACAGGATCTGGAGAGCTGACTAAGTCCGATTCAC
            AGCCACCTGATGTTTGGCAAACAGCGACAGAATGTAGCCGCAATTGGCTGGGGAATACTAATGAGCCAATTTTCTAGCTG
            CCACAGCAAAATAGCGAAAATTAATGGCTTTGGTAAAAGTGATAGGAAACTGTAAAATTCGATTAATTATATCAACTATA
            AAGGACTAATACCAGATATAGTCATAGTCTAGATTATGATATACATATATTGTACTATTTCTATAATAAATAGATTATTT
            TCAAAATGTTCAAGCTTAAAATGTGTTTTGTAGTAC
            
            Other Products of this Gene
            Other Transcripts
            Name
            FlyBase ID
            Length (nt)
            FBtr0347136
            8869
            FBtr0347137
            9895
            FBtr0347139
            8838
            FBtr0347140
            3432
            Comments

            Transcriptional initiation is supported by short-capped RNA data (FBrf0209722).

            Transcriptional initiation is supported by RAMPAGE TSS data (FBrf0220331).

            External Crossreferences and Linkouts ( 2 )
            Crossreferences
            RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
            RNAcentral - A comprehensive ncRNA sequence collection representing all ncRNA types from a broad range of organisms
            Synonyms and Secondary IDs (2)
            Reported As
            Symbol Synonym
            CR46006-RC
            lncRNA:CR46006-RC
            Secondary FlyBase IDs
              References (0)