FB2026_03 , released September 17, 2026
Transcript: Dmel\lncRNA:CR46006-RD
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General Information
Symbol
Dmel\lncRNA:CR46006-RD
Species
D. melanogaster
Annotation Symbol
CR46006-RD
FlyBase ID
FBtr0347139
Feature type
Associated gene
Evidence Rank
Length (nt)
8838
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 0 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        Contained within the annotated transcript, internally consistent
          End(s) extend beyond the annotated transcript, internally consistent
            Sequence
            GCATTCGCTATTCGGCTTTGAAGCCGCTCGGGTTGCCAAAAGAACAGTTAGCCCAGCAATTCTCCGGAGAATCGAATGGA
            AACGATTCTTCTGGGAAACGAACTCGTGACCGCCCACGTGTCCTACGTTCTAATCTAACTTATAAGAACTCTATCACCAT
            TTGTGTGTTTTTTCTGTGCGCCAAAGAGCCGAACGTTTTAAGTTTTTACAGAAAATTAGATGTTTGCCAAGAATTAGATT
            AAACATTTTCCGGCAGTGTACTTGAGTGCTTGTGTTTGTGCCACCGAGTGTCTGTGTGATTGCCAATGTTTTTTGTGGCC
            TGCAGCTTAAATATTTCTAGAGGGAAAATCACAACGACTTCTGGGTACCCCCAAAAAGGCAGACGTCAGTCGTAACCGTA
            CTCTGTGCTAGAGCGCCCAAACCCCGGAGAGCCAAAGAAACCGAAGACCCCAAAGAATTGGAAGAGGAACTCTGTGGAAC
            CACAAAGGCAACATGTTGCACATGCACTCGCCAAAAGCAATTTGCATACAAATGTTGCCAACGCACTTCAAAAACTGCAC
            AATCACAGGGGGGGGGGTTTATTTTTTTGGTGGCGGTGGGTGGGGTGTTGCAGCGGAAAAGGGTAAAAGCCGCTTCATAA
            TTTGATATTAAACATGCACGCGTGTCTCCTTCTCTTTTACTCGCATATGTGCAACTTGTAAATTTGCAAATTGCTAAAAC
            GCATGACAGGAACAAAGGGCGAGGATCTTAATGGCGGGGAAACTGGGGGCAGACTATCGGGCAGCTGTGTGAATTTGCAT
            TTACATCAAGGAATCGCAGGAAAGGAAAAGAACTACAAAAAGTTACCCAAAATTCAAGAAAACTGAATAAAAAAGATGTG
            CAGTTTGCTCAATTGACTTTCAATTGCAAAATATACAAAATGCATTGGGAAAAAGAAGTAGAGCTCAAGGCGAAAAGAAA
            TTTTCGATTTGGTCCCTCGATTATTTAAAATCACCTGTCTGCGCAAAGTTTCCTAAAATTGTTTGTTTTAAAGAACAAGC
            TGTTCATATTTCTTTAAATATTTTAGCTATGCTAATCAGTTTTTTCCAGTGCCTCTTTGAATAAAAAAGGCAAGCCCAAA
            TGAATTTATTTTCAATTTTATTTTCAATCTGCTTTGTGTCCGTCATATGATTGACATGGTCGATTGAACTGGCAAACGAG
            CGAGGGAGTGGAACGATACACATATCGTTTATTTTTGGCAGCAAGTGTTTGCGTTCGATTTGCAGTTTTGTTAATACTGC
            ACTCGAAAATACCCGAGACACCTCCTTAAACTCAAATCCAAAATGCGAGGGCTCTTGAAACCAAAAATCTCCGGAGTCTT
            AATAAGCTGCTTGCAAAAAAGAAGTACACACTTTTTATATCAGATCTGTACACGCAATTGAGTGTACATACTTCTTTTTT
            TTTGTGAGTTAACACGTCTGTGTGTGCATATATAAATCATATTTATGAGACATTTCCCCAGCAGGGAAAATACGAAATGG
            AATAAAAAAAAAAAACGTATGAATGTTAAATAGGCACGCAACGTGCGAAAGGGATGGCCACAAAATGCGTCACTCCCCCC
            ATTCGCCTGACTTTTCCTTAACGAAGGAAAACAATAATCAATAAGTAGTAATACAACGGCCGACAATTGTGGGGAAACTC
            ACCCCCGCGACTTAGTCGAATTTCCTCCCTCTCGCTCATATGTGTTAGAATTTTTGTAGCCTGGGTAGTTCATAACTTTT
            CTCTCATATGTGTGTGTGTGTGTGTGTCTGTGGTGGTTTTCCTTGGTTCTTGGCCAGGACTTCAGGCGTTTGACAGCCAT
            GTTTGTCCTTCGCACATGCACACACACACACACGCCCACACATGATTGTAGGCGTCTCCTTGTGGCGGCAACCCCCCCAA
            AAAAAAGCAGGAAAAAAAGAAAAAGTGTGGCGGAAAAGTGTGCCACAAACTTTTCGCCCGAAAAAAGTTTGTCTGCTGAC
            ACAGATCTGTGTGTAAATGAGCGAGATAACAAACATTTGCAAATTTTCCAGACAATACCTCTTTTTACACTCTAATCGTG
            CACATAAAAAAAATAATTGAATTGCTTCCGCTAAATAATCTTTTTTATAGATTCTAATTAAAGCTTTTTTATATTAATAT
            TAGCTTAATATTTATATACAAACATTAACTGAAAATTGCTTATCCTTATAACCATTGATGGTTTAGAATGTGCGTTTTTA
            AAATGTATTAATTCAGTTCCACATTTTTGCTCTGAGTGTAATCAACCTTTTTTTTTGGCTTGTTAAAGAGTTGCCGAAAA
            ACAAATTGGAAAAATTTGGTTAAACTTTGGGTTCGTTTCAGTTTTGGGCTCAGCTGATTTATTGTCATAAATTTCATTGA
            AATTCATGAGGCTCTTGGAAGAACCTCAAAAATGTAAAAAACTGGGCGTGGCCTAAATGATGTCCGCGTGTGCGTGTGTG
            TGTGTGTTGCTGCGCCTACGCAACGGCCCAAAAGATTTATTTCAATGGAACGAAGAAATTATAATATTTTCTAACTTCTA
            TCATGGAAAAAGAAATATAAAAGAAATATGTACATACAATTCTGTGGGGCGATTATGAAAAGAGCTGTTGATGTATGAAT
            TGTATGGGCCTCTCATAAATCTAGGGGCCCTGTCAAGGTGTCCAATACGTTTTTCTGGCCTGTCCGTGTGTTTGTGCCTC
            AAGTGGCAGTCATAAATTTGAGATTTATGTTCATCTCTCTTTTCGATTTTGTTGTTTTTTGGTTCCTATTTTTTTTTGTC
            CATTTACCATTTTTTCGGTTTTGGTCAAGAGAACCTGGCACAAAGCACAGTTCTTTACTCGGGCTTGTTAATTAAATGCG
            ATTGCATCATCGCATATTTCAGCTGTCCATCTACTGTGCACAATGCGGGTTAAGTAAATACATACACCGATGTATTTGGT
            ATATATAGATTACTTCGCATTTTTATTTTTCACTTGTTCCTATAGTTTACTCTTGTTTGTAATTATGTTAAAAAAGGATT
            TAGTTTGGTTTTTTCTGGAGTTAATATTATTAATTTGTTGGCCCTTGCTGTATATATCTTTATTTCATTTTATCAAGCTA
            TGACTGGACAGAGATTGTCGCTAATCGCCGCTCATGTACCCCAAGACATGCCGCATTTGTCTTTGTCTTTTATTTTTCGG
            CTTTGTCTGCTCTGACACATTTTTCTTATGAATTTTCAGTATTTTCCCCCGGACTCACTAATTTTTCGTGGCGTGTTTGT
            TCTGACCGCCAAAATTGCTTGTCCAACATTTGTTGAACATGTTTTTGTACTTTGTTTCGGTTATTTTTTTTTAATATTTT
            TTTTTTTTATGTGGGGAACCAACAACGAACTACACGCAAGTGCTGAAGATTTTCAGGCAGATCCGTTAAACATCAAAATC
            AACTTTTTCAAGCTCATTAAACAACCAGGGAAAAAAAGTGAAATAAAGCCAAACGTTGACCTTCAAAAACGCAACGCAAC
            CAAGCGAAAATGGCAGCAACAAAAACAAAAATGATTAAATACATAATACGAAAAATAACAAAAGTCAGAGCCGCTTGGAA
            ACAGGTTGTTGTTTCGCTCTCTCTATTGTTAACATTTTATTATGCTTTTTTCAAGCGGAAAGCAACAAAAGGCCCCAAAA
            ACTCTTGCAATTTTACGATTATTTACGATCGAAATACATTTCTCTGCCGATTTTTGACCTTGCAGTTGTTGCACTTAACA
            CGTGCCAGAAATTGATAATGAAAGAACGCGTTTTCGGGTGTTAATCACACTTCGGGCTATAAAAAAAAACATGCGAAAAA
            AAGAAAAAAAAAACAGCTCTCTCAAAAAGTAAAGCCCGCAAAAGGCGCCAAAAATATTTCGACGACGAACGACTCAGACT
            AAATTTAAAGTCAGAAGAATCGTTATTTGTAAAACTACTTGTCAAATACCCTTTTGGTAAAATCTTGAGATTTGGAAACT
            TTTTTTTTTTTTGGATGTTTTACAAAACGCGCAAAAATCTTTAAATAGTGTACATAATGTATGCATATAGGTACATATTG
            AGAACTTTACCTTTTATATATGTATGTACATATAATCCACAAATTTACAGAAGTATCTTTACCATACCCAATAATACTCT
            ATATACACGAAATATTCTAATCATAAATGGACGTTTGCCGCGATGACGAAGACTTTGCCTATTGTAGATTTTTATTTGCC
            CATGGTTTGTGTTGCTTTTGTTGTGGGCACTTCAAAAGTCGTGTGCGCGTTGTTGTTGTGTTGTGGTGTTTGGTTGTTGT
            ATATCGGTTGTTTACTTTTACGGTAAATGCGAAAAGCAACAACACTAAGGACTACAAAAAAGCGCGCGCTCGTCGCGCGT
            ATCTAGATAAATATCTGTGAAAATACACACTTGAGGCCAAGATGCTGCACAGTGGGCGCCATAGAAATACGGCACTATAG
            AAAAGTTTTAGGTGAACTTAGCATATTCTCTATTAAAGGAAAGAAAATTACACATATTCTACTGATGAAACTAAAATTTG
            GATAATATTCAATTGCTTGCTGTTAGTTCAAAGATTAAAAAGTGAAATAATTTTTGGTGTATAATTGTGTGAGTAAACAA
            TGAAAAAGCGTGATTAATAAGTCTAAATTCTATGCATATTGAGACAACAGTTTGGTTCTAAAACGCACTTATTACATTAA
            GATATGTTTATGAAACAAATTTTCTTTTCTTTTTATTCTCTGAATACTTCCAATATCGTGACCTCACCTGTTCCTGGTTT
            TCTTGCTGCCTTTTCCAGCGGAGGCAACGACCAACAATAACAACAAGCAAAGAAGACGCAGCGCAAAAAAAAACAATCGT
            AAACAGATCATCGAACTCAGCCGCTGTGTTGTTGCTCCTGTTGTTGTTGTTGCTGTTTGTTGGCTGCCGTTGGCCTTGAT
            GTGCCTCAAAAATTATAGTTTTTTTTTACGGTGCAAGCTCTTTTTTTGTGGCTTAAAACCATTTAATTGTTTCATTAATT
            AAAAGTCGTTTATTTAGATATTTTTTTTTTTAATTTTACTGCCGTTTTGGTGATATTAATAGAGTTGACAAAGCGTTCGG
            CGCCCACGCAGCAAGCAGCGACGTTGACGTCGGCAGAGCTGCTTTCACCGCTGCTTGCGTCATGTTGGGCGACAAAGCTG
            CAACGGCGACAAAGCAGCAACCAATATGCAGTTGCCATGTGAGGGTGTGTGCAATGCAGCCGCTAAATGTGTGCAATTCA
            CCACTTGAGAAAACCACCACCGCCGAAGCAAAGAAACCCACCACGGCAGCGACGTCGAACATCGACGAACATCGTCGAAC
            ATCGCATTTCGAGTTATTTTCTGCGAGACTTCGCTGCGTTTTTTTCAGTTGAGTTCCGGAGCTCCAAAGTCGCGCATCAA
            TCGCTCGCAAACAGCATCGTGTTTTCGCATTCGCGTGACTTGACAGAAATTCGTAAAAATTGAGAAACAATTTACAAGTG
            ATGAACAAAAATAAACTTAAACTTTTAAGTTTAATAAAACCATCAAATAATACACAGTTTCGGAAAAAGATAATACATTT
            TAATGAAAATCTGAAAGCAAATAAATTTTACAAAGTTAATGATTAAAAATTAAACAAACCAAAAAACATAAAAGACATAA
            ATAAATTCAATTCAAAAATTCTTCTTAATATCTAACTGATATTTATACTACGCAGACGAAATAAATAAACATTAAATAGC
            TTATTTTTGGATGAAATTCTTATATTGGAACACAAAAAGATCAAAGTTTTCAAAAATTTCTAAAGGGAAACTCTTGAAAT
            AAACTTGCTATAAATATTATATTTTCCATGCCTTACTGGACACATTGGTCTATAAAGTAATTTATTTTTCCTCAAAAATA
            TTGTATATCCCTTTTTTCGATAAAGGAAACCTATAATATTTTATTTTTCTTACTTCCTATTTTAAATTCTGTAGAAAAGT
            AAAAAGCGTAAATACGGTTCTTAAAATCAAAGAAAAAAGTATAGCATTATTTCCTTAAAAACTTCCCATAAATAAATTCT
            TAAACCTGAAATAATATACATATCTAATGAAAAAACTTTGTCCAAACTTTCCATAGATATAATTCTAATAAATAATAATA
            GTAAAACGCGCACAAACGCGTCCATTTCCAGATTATTAATAATGATTTGAAAAATATTTAAATTCAATCAAACAAAAAGT
            CTATCCAGCAAAAAACGCCAACCCAAACGCCGAAAAAAAAAAACAACACTGAAAAAGCTGCCAAGCGAGAAACGACGGAG
            GACCATACCATATATAACCCCTATATATAACCGTCGTCGTCATCATCATCATCAAGCTAGAAATTCCCCCAGCACAAATC
            CCATGAAGAGAATCCCATCAGTCCGGCAACAACAACAACAACCAAGAAATACTACAGAATAAAACCAAAAAAAAAAAAAA
            ATGAAAAAAAAAATCTGAAAAAAAGAGTTGGAATTTTTGTAAGCTGGTATGTGAGCTGTTGTTCGCCTCTTTTACGGTTT
            GAGCTCGAGTTTTGTGAAAAAGAAAAAGGGAAACGCGCTGCCAAGATATTTTTTACCTGGTTTTTGCCATCAGCGAGGTA
            TAGAGTTCCTACGTTCATTATAAACTCGTAGGAACTTCATACCGTGCTCTTGGAAGACCAAAAAACAACCAAGTGAATGC
            AAAAATCCCAAAAAGTATGGCGAAAACAAACAAAAAGTGCGTTTTAAAACGATGAGAAAACGCTGGACAAACGAAAAGGA
            AGTTGCAAATGATGGGAAAGTAAGAGTTACTACTAAAAATGTTGATCGAAATTCAGTAGTGTGTTTGCCCAAGTTTATTA
            TAGTAATTTATGGCAAGATCATAACACAAAGCTGCTCATTAAGAGCGAAATGCGATGATATTTGGTTGGTAAGAAGTAAG
            GCAATGTTATCATTATTTTTATTAAATGTATATTTAAAAACTATCTTTGCATGAATAAACTTGATACTTGATAGCTAAAA
            TTACAAAAAAAAAACTTTTAATATTCGATCGTCATTTTATGCCTTTTCTATTGGCGATATTATGCTTTTAACTTATCCAT
            TAATTACATCAGTTAGTGAATAGGAAATTACTTTTAATAAAAACCGCAGAGTGCGATTAAAAACGCTATAAAAACGCGCG
            CGAAACGCATACTACACTCCATGCGTTTGTAGAAAAAAATGATCAAAATAGAAATAACATTTAAACCTAACAAAAGTATT
            AGAATTATGTTAAAACTTTTCCGCTACAAAAAGAACTTGAAATGCATCAGAAACTGATCGAGATACTGAAAACCAGCTAC
            CGATAAGATATGGAAAGGCAATTCTGAGTGACTAATTCCAAGTAAAGGGCGATTGAGGTGCGGTTAATCCGAGCCACTTA
            AAAGCACTTGTCATAAATTAACAAACGTTATTTCTAATCTAACTAAATAACAATTTCAATTAATTGCCACGTTAAGATAA
            TGTTGGATTTGTGGATGCTCTGTCCCGCTCTACATATTTACAAACGTATAGCCATCTCTTTCACCGGCTAAATGGCATCC
            ACTTTGAATTTGTTAGTTGGTAAAGCAGCTAATGGCAATTGTTTTCTTCTTGATTGGTGGTTTAGTACGGGGATAACTGT
            TTAAACGTAATTTAGTAATGGAGATTACTTGGAAAGGGTTTCAAGAAGCATATTTATAGCATGGCATTTCTACATGAAAA
            GTTTTCTACAAGAAAAGTTTTCTACTTGCTTGAAACGTAAACATTCCATACGATATTTGTGAAGAATTTCTCGGACTTGG
            ATACCAAAATACCACAAAAACCATTGTCAAAAATCATTAAACACAATATGACTGTCGACTGTCTGGACGACAAGATATGG
            AGTACAAACGGACTGAACACAGTCGATAGGAGAAATGCATGCCATTTTTATTTCATTTTATTGTACTTATTTTTCGCTAT
            GCCCGATAAGCAGCAAAATAAAAAATAATAACGCAAACGGCACACACACAATTTGCAGTGACACACCAAAGGCCACAATG
            ATAATTTTATCAACTCGAAAAAAAAAATGTATATGTATTTAAAACGGAGGGAGAGAGAAAAATATAAAAAATATATATTT
            GCTTTATCGTGCAAAAATGGGAATGAAACGAGCAAACGGCTTCCTTGTGGCTTTCGCAATTTTCGCAGCATATTTGCCAC
            TGTCAGTTTGGCCAAAAGGATTGTTGGCCAGGCCAGCAACCAAACGGCAGCAGCATTGCACCGCTGATTTCAACGCTTTT
            AAATTCCTTCACTTCTGCACTGCTGTTGCAGCAGTTAATTTAATTTCAGCTCATAAATCAAAACTGTGCCGCGCAACAAA
            ATGTTTGCTTTTGACGCGCCGTTTTTGTCGCCAGACTACCGACATCACTGGACATGGACGTGGGACACTGGACAAGTGGA
            ACGGACATGCAGGACGGCAGCTGGAGGATCGGGAGTAGGAGCATGCCAACAGGATCTGGAGAGCTGACTAAGTCCGATTC
            ACAGCCACCTGATGTTTGGCAAACAGCGACAGAATGTAGCCGCAATTGGCTGGGGAATACTAATGAGCCAATTTTCTAGC
            TGCCACAGCAAAATAGCGAAAATTAATGGCTTTGGTAAAAGTGATAGGAAACTGTAAAATTCGATTAATTATATCAACTA
            TAAAGGACTAATACCAGATATAGTCATAGTCTAGATTATGATATACATATATTGTACTATTTCTATAATAAATAGATTAT
            TTTCAAAATGTTCAAGCTTAAAATGTGTTTTGTAGTAC
            
            Other Products of this Gene
            Other Transcripts
            Name
            FlyBase ID
            Length (nt)
            FBtr0347136
            8869
            FBtr0347137
            9895
            FBtr0347138
            9396
            FBtr0347140
            3432
            Comments

            Transcriptional initiation is supported by RAMPAGE TSS data (FBrf0220331).

            External Crossreferences and Linkouts ( 2 )
            Crossreferences
            RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
            RNAcentral - A comprehensive ncRNA sequence collection representing all ncRNA types from a broad range of organisms
            Synonyms and Secondary IDs (2)
            Reported As
            Symbol Synonym
            CR46006-RD
            lncRNA:CR46006-RD
            Secondary FlyBase IDs
              References (0)