A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Dmel\P{EP}drprEP522 Insertion

General Information
Symbol Dmel\P{EP}drprEP522 Species D. melanogaster
Name FlyBase ID FBti0007842
Feature type transposable_element_insertion_site
Description
Inserted element P{EP} Expression data
Affected gene(s) drpr, Oseg4 Viability / fertility
Causes allele(s) drprEP522, Oseg4EP522 Stock availability 1 publicly available
LINE ID EP(3)0522
Genomic Location
Chromosomal location 3L ( 62B1 ) Sequence location 3L:1,731,069..1,731,069 [-]
Map ( GBrowse ) detailed view FBti0020020 FBti0074863 FBti0051766 FBti0065752 FBti0049655 FBti0112551 FBti0048385 FBti0067949 FBti0044723 FBti0007842 FBti0100892 FBti0067384 FBti0044126 FBti0112825 FBti0025195 FBti0011398 FBti0105828 FBti0102657 FBti0125478 FBti0052121
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Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
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FB2012_01
FB2011_10
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hide Detailed Mapping Data
Chromosome (arm)
3
(BDGP Project Members, 1994-1999)
Sequence Location
3L:1,731,069..1,731,069 [-]
(BDGP Project Members, 2000-)
Orientation
Cytological location
(computed by FlyBase)
62B1 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
62B1-62B1 (reported as inferred from sequence location)
(BDGP Project Members, 2000-)
Comments concerning
location
hide Sequence Data
Flanking sequence
AQ025104
(FlyBase, 1992-,  
hide Inserted Element
Construct P{EP}
Location-dependent
role
mobile activating element (UASG)
(Rorth, 1996)
Size 7.987Kb
Associated alleles
Scer\UAS14x.hs
TrlBRcRa
w+mC
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
drpr
(BDGP Project Members, 2000-, Bejarano et al., 2008)
Oseg4
(FlyBase, 1996-)
hide Alleles and Phenotypes
Causes alleles
drprEP522
(Gene Disruption Project members, 2001-, Freeman et al., 2003, FlyBase, 1996-, Bejarano et al., 2008)
Oseg4EP522
(FlyBase, 1996-)
Lethality
References
lethal | larval stage
(Freeman et al., 2003)
Sterility
References
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
Homozygous larvae show extremely reduced motility compared to control heterozygous larvae and are profoundly uncoordinated.
(Freeman et al., 2003)
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
hide External Images
FlyView (LinkOut)
hide Data on Genetic Line
Line ID
EP(3)0522
(Gene Disruption Project members, 2001-)
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 1 )
Bloomington
17175
w1118; P{EP}drprEP522 Oseg4EP522
hide Linkouts
hide Comments
Location 3L:1714601-1714602 confirmed by FlyBase alignment of dbGSS accession AQ025104 to D. melanogaster arm Release_4 and heterochromatin Release_3.2b. Insertion orientation confirmed.
(FlyBase, 2005)
insertion of mobile activating element
(BDGP Project Members, 1994-1999)
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
EP522
(Bejarano et al., 2008)
ep(3)0522
(FlyBase, 1992-)
EP(3)0522
(FlyBase, 1992-)
P{EP}BcDNA:GH03529EP522
(FlyBase, 1992-)
P{EP}drprEP522
(FlyBase, 2005, FlyBase, 1992-)
P{EP}EP522
(FlyBase, 1992-)
Secondary FlyBase IDs
hide References ( 11 )
Research paper
Bejarano et al., 2008, Genetics 178(1): 307--323
A gain-of-function suppressor screen for genes involved in dorsal-ventral boundary formation in the Drosophila wing. [FBrf0202749]
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Freeman et al., 2003, Neuron 38(4): 567--580
Unwrapping glial biology: gcm target genes regulating glial development, diversification, and function. [FBrf0160527]
Spradling et al., 1999, Genetics 153(1): 135--177
The Berkeley Drosophila genome project gene disruption project. Single P-element insertions mutating 25% of vital Drosophila genes. [FBrf0111489]
Rorth, 1996, Proc. Natl. Acad. Sci. USA 93(22): 12418--12422
A modular misexpression screen in Drosophila detecting tissue-specific phenotypes. [FBrf0090768]
FlyBase analysis
FlyBase, 2005, Assessment of transgenic construct insertion sites.
Assessment of transgenic construct insertion sites. [FBrf0184339]
FlyBase, 1996-, FlyBase inference based on genome sequence analysis.
FlyBase inference based on genome sequence analysis. [FBrf0104946]
FlyBase, 1992-, FlyBase curation
FlyBase curation. [FBrf0105495]
Computer file
Gene Disruption Project members, 2001-, [title not yet available]
[title not yet available] [FBrf0132177]
BDGP Project Members, 2000-, Berkeley Drosophila Genome Project.
Berkeley Drosophila Genome Project. [FBrf0125078]
BDGP Project Members, 1994-1999, Berkeley Drosophila Genome Project.
Berkeley Drosophila Genome Project. [FBrf0067338]