A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Dmel\P{EP}EP2419EP2419 Insertion

General Information
Symbol Dmel\P{EP}EP2419EP2419 Species D. melanogaster
Name FlyBase ID FBti0011114
Feature type transposable_element_insertion_site
Description
Inserted element P{EP} Expression data
Affected gene(s) EP2419, RapGAP1 Viability / fertility
Causes allele(s) EP2419EP2419 Stock availability none publicly available
LINE ID EP(2)2419
Genomic Location
Chromosomal location 2L ( 28B1 ) Sequence location 2L:7,576,408..7,576,408 [-]
Map ( GBrowse ) GBrowse View Help detailed view FBti0019133 FBti0051993 FBti0044108 FBti0070241 FBti0071000 FBti0069431 FBti0046255 FBti0067068 FBti0044461 FBti0114998 FBti0035804 FBti0011114 FBti0113262 FBti0034265 FBti0102914 FBti0106045 FBti0033941 FBti0104766 FBti0112246 FBti0025677 FBti0110904 FBti0103081 FBti0103181 FBti0036924 FBti0105447 FBti0113041 FBti0103136 FBti0107258 FBti0110009 FBti0104362 FBti0113501 FBti0007729 FBti0010898 FBti0011291 FBti0007630 FBti0006508 FBti0077983 FBti0024895 FBti0028840 FBti0057389 FBti0036392 FBti0016428 FBti0036441 FBti0103815 FBti0069550 FBti0111281 FBti0025884 FBti0104331 FBti0026399 FBti0108340 FBti0104153 FBti0028898 FBti0109370 FBti0072748 FBti0029166 FBti0030367 FBti0068782 FBti0028285 FBti0033420 FBti0034347 FBti0034479 FBti0033613 FBti0034482 FBti0034574 FBti0108675 FBti0104816 FBti0054669 FBti0107780 FBti0111376 FBti0103063 FBti0103649 FBti0103652 FBti0055539 FBti0100782 FBti0045767 FBti0109009 FBti0146026 FBti0017191 FBti0145192
Member of Large Scale Dataset(s)
Dataset

A set of transgenic insertion stocks derived by TE mobilization using the P-element construct P{EP}. The P{EP} construct construct carries a w[+mC] mini-white visible marker, Scer\UAS binding sites for the Scer\GAL4 transcriptional regulator, and bacterial sequences that allow plasmid rescue. The GAL4-UAS system allows regulated expression of genes proximate to the site of the insertion: genes properly oriented with respect to the Scer\UAS sequences can be conditionally expressed via transgene-derived Scer\GAL4 activity.
Insertion lines from this collection were mapped and assessed for inclusion in the Gene Disruption Project collection; flanking sequence data were submitted to GenBank.
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Description
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FB2013_03
FB2013_02
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide Detailed Mapping Data
Chromosome (arm)
Sequence Location
2L:7,576,408..7,576,408 [-]
Orientation
Cytological location
(computed by FlyBase)
28B1 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
28A6-28A6 (reported as inferred from sequence location)
28B1-28B2 (in situ hybridization reported)
Comments concerning
location
hide Sequence Data
Flanking sequence
hide Inserted Element
Construct P{EP}
Location-dependent
role
mobile activating element (UASG)
Size 7.987Kb
Associated alleles
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
hide Alleles and Phenotypes
Causes alleles
Lethality
References
Sterility
References
hide Phenotype Manifest In
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Statement
Reference
pnrMD237/+ adults expressing EP2419EP2419 under the control of Scer\GAL4pnr-MD237 have a deformed scutellum.
Expression of EP2419EP2419 under the control of Scer\GAL4ey.PH results in rough eyes. Flies expressing EP2419EP2419 under the control of Scer\GAL4hs.2sev have rough eyes. Flies expressing EP2419EP2419 under the control of Scer\GAL4en-e16E have wild-type wings.
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
Reporter construct
used in assay
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FlyView (LinkOut)
hide Data on Genetic Line
Line ID
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 0 )
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Location 2L:7576408-7576409 confirmed by FlyBase alignment of dbGSS accession AQ254861 to D. melanogaster arm Release_4 and heterochromatin Release_3.2b. Insertion orientation confirmed.
insertion of mobile activating element
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
P{EP}EP2419
P{EP}EP2419EP2419
Secondary FlyBase IDs
hide References ( 10 )
Research paper
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Pena-Rangel et al., 2002, Genetics 160(3): 1035--1050
A misexpression study examining dorsal thorax formation in Drosophila melanogaster. [FBrf0147055]
Tseng and Hariharan, 2002, Genetics 162(1): 229--243
An overexpression screen in Drosophila for genes that restrict growth or cell-cycle progression in the developing eye. [FBrf0152035]
Rorth, 1996, Proc. Natl. Acad. Sci. U.S.A. 93(22): 12418--12422
A modular misexpression screen in Drosophila detecting tissue-specific phenotypes. [FBrf0090768]
Personal communication to FlyBase
Gene Disruption Project members, 2001-, (Computer file)
(Computer file) [FBrf0132177]
BDGP Project Members, 2000-, Berkeley Drosophila Genome Project. (Computer file)
Berkeley Drosophila Genome Project. (Computer file) [FBrf0125078]
BDGP Project Members, 1994-1999, BDGP Project Members, 1994-1999, Berkeley Drosophila Genome Project. (Computer file)
BDGP Project Members, 1994-1999, Berkeley Drosophila Genome Project. (Computer file) [FBrf0067338]
FlyBase analysis
FlyBase Curators, 2013, Members of TE insertion collections.
Members of TE insertion collections. [FBrf0220668]
FlyBase, 2005, Assessment of transgenic construct insertion sites.
Assessment of transgenic construct insertion sites. [FBrf0184339]
FlyBase, 1992-, FlyBase curation.
FlyBase curation. [FBrf0105495]