FlyBase Aberration Report: Dmel\In(3R)Ubx[7LL]ats[R]

General Information

Symbol

In(3R)Ubx^7LLats^R

Species

D. melanogaster

Name

FlyBase ID

FBab0005717

Feature type

inversion_derived_deficiency_plus_duplication

Also Known As

Df(3R)XS

Computed Breakpoints include

Features within 96A1--96A25 (Observed cytology)Features within 89C--89E2

Sequence coordinates

Member of large scale dataset(s)

Nature of Aberration

Cytological Order

Progenitor

In(3R)ats-D

(Gonzalez et al., 1989)

In(3R)Ubx^7L

(Gonzalez et al., 1989)

Mutagen

recombination

(Gonzalez et al., 1989)

Class of aberration (relative to wild type)

inversion_derived_deficiency_plus_duplication

Class of aberration (relative to progenitor)

Breakpoints

Causes alleles

Carries alleles

Transposon Insertions

Formalized genetic data

Genetic mapping information

Comments

Comments on Cytology

96A1-96A7;96A21-96A25

(Bilder and Scott, 1995)

Deficient for 96A1-96A7;96A21-96A25

(Harbecke and Lengyel, 1995, Saenz-Robles et al., 1995)

Sequence Crossreferences

DDBJ / EMBL / GenBank

DNA sequence

Protein sequence

Gene Deletion and Duplication Data

Genes Deleted / Disrupted

Complementation Data

Completely deleted / disrupted

aor

(Cobb, 1996)

ash2

(Gonzalez et al., 1989)

creeper

(Ghabrial et al., 2011)

mld

(Neubueser et al., 2005)

sd-1

(Babcock et al., 2003)

slo

(Cobb, 1996)

Partially deleted / disrupted

Molecular Data

Completely deleted

Partially deleted

Genes NOT Deleted / Disrupted

Complementation Data

asp

(Saunders et al., 1997, Cobb, 1996, Gonzalez et al., 1989)

crb

(Cobb, 1996)

Csr

(Pereira et al., 1995)

Indf

(Cobb, 1996)

shps

(Tomaru et al., 2018)

Molecular Data

Genes Duplicated

Complementation Data

Completely duplicated

Partially duplicated

Molecular Data

Completely duplicated

Partially duplicated

Genes NOT Duplicated

Complementation Data

Molecular Data

Affected Genes Inferred by Location (0)

If no genes are listed here, it may be because the affected region is very large. The JBrowse insert above may show an error for the same reason, and other FlyBase tools such as CytoSearch may also fail for large regions. You can contact FlyBase for more help.
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Related Comments

Phenotypic Data

In combination with other aberrations

NOT in combination with other aberrations

The In(3R)Ubx^7LLats^R chromosome does not act as a dominant suppressor of telomeric silencing (assayed using the effect of the chromosome on the eye colour phenotype of flies carrying "P{w^var}KR3-2", a stable "brown-red" variant of the P{3'WP-2,w^var}2Lt insertion).

(Mason et al., 2004)

Does not cause unconditional lethality in hybrid females when heterozygous with D.simulans chromosome.

(Coyne et al., 1998)

No second site non-complementing phenotype with zip^Ebr and zip^mhc-c6.1.

(Halsell and Kiehart, 1998)

Shows no maternal enhancement of dpp^hr4.

(Nicholls and Gelbart, 1998)

Wild type nonanol phenotype; repulsion.

(Cobb, 1996)

Midgut development of mutant embryos is wild type.

(Bilder and Scott, 1995)

Mutation changes the level of w expression in ph-p^lac+3 flies; eye colour is darker.

(Fauvarque et al., 1995)

Homozygous embryos show variable defects in germband retraction. Differentiation of the midgut epithelium, hindgut and Malpighian tubules is variable.

(Harbecke and Lengyel, 1995)

'Sloppy' ventral cord.

(Smith et al., 1993)

Heterozygous viable, homozygous lethal and fully complements all the phenotypic traits shown by asp homozygotes.

(Gonzalez et al., 1989)

Stocks (2)

Bloomington

1972

In(3R)Ubx^7LLats^R, asp¹ ats¹ p^p/TM6B, Tb¹ ca¹; y¹/Dp(1;Y)y⁺

Kyoto

106608

In(3R)Ubx^7LLats^R, asp¹ ats¹ p^p/TM6B, Tb¹ ca¹; y¹/Dp(1;Y)y⁺

Notes on Origin

Discoverer

Balancer / Genotype Variants of the Aberration

Separable Components

Other Comments

Synonyms and Secondary IDs (9)

Reported As

Symbol Synonym

Df(3)XS

(Perrin et al., 2003)

Df(3R)Ubx^7LLats^R

(Mason et al., 2004)

Df(3R)XS

(Ghabrial et al., 2011, Brumby et al., 2004, Babcock et al., 2003, Bloyer et al., 2003, Amoros et al., 2002, Carrera et al., 1998, Coyne et al., 1998, Halsell and Kiehart, 1998, Bilder and Scott, 1995, Fauvarque et al., 1995, Harbecke and Lengyel, 1995, Pereira et al., 1995, Saenz-Robles et al., 1995, Smith et al., 1993)

Df(3R)XS Dp(3R)XS

(Cobb, 1996)

Df(3R)XS, Dp(3;3)XS

(Lee et al., 2001)

Df(3R)XS, Dp(3R)XS

Dp(3;3)XS

In(3LR)Ubx^7LLats^R

(Nicholls and Gelbart, 1998)

In(3R)Ubx^7LLats^R

(Tomaru et al., 2018)

Name Synonyms

Secondary FlyBase IDs

References (27)

Report Sections

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