FlyBase Aberration Report: Dmel\Df(2R)50C-129

General Information

Symbol

Df(2R)50C-129

Species

D. melanogaster

Name

FlyBase ID

FBab0026821

Feature type

chromosomal_deletion

Computed Breakpoints include

P{CaSpeR}Cp1^50C;[]

Features within 50C19--50C23 (Estimated cytology)Features within 50C21--50D5

Genomic Maps

JBrowse

Sequence coordinates

2R:13,964,325..13,964,325 (Df(2R)50C-129:bk1)

(Flores et al., 2009.10.15)

2R:13,991,325..13,991,325 (Df(2R)50C-129:bk2)

(Flores et al., 2009.10.15)

Member of large scale dataset(s)

Nature of Aberration

Cytological Order

Progenitor

P{CaSpeR}CtsL1^50C

(Flores, 2004.1.28, Preston et al., 1996)

Mutagen

Delta2-3 transposase

(Preston et al., 1996)

Class of aberration (relative to wild type)

chromosomal_deletion

Class of aberration (relative to progenitor)

chromosomal_deletion

(Flores, 2004.1.28, Preston et al., 1996)

Breakpoints

[];[]

(Preston et al., 1996)

P{CaSpeR}Cp1^50C;[]

(Flores, 2004.1.28)

Causes alleles

CtsL1^50C-129

(Flores, 2004.1.28)

Carries alleles

Transposon Insertions

P{CaSpeR}CtsL1^50C-129

(Flores, 2004.1.28)

Formalized genetic data

AGO1 << bk1 << Cp1 << l(2)50CDa << bk2 << mam

Genetic mapping information

Comments

Sequence coordinate is estimated.

(Flores et al., 2009.10.15)

Comments on Cytology

The deletion extends ca. 27 kb distally from the end of P{CaSpeR}Cp1^50C. Deletes from the middle of Cp1 to near the start of longer mam transcripts and all the genes between.

(Flores, 2004.1.28)

Cytologically invisible deletion.

(Preston et al., 1996)

Left limit of break 1 from non-inclusion of AGO1 (FBrf0091145) Right limit of break 1 from inclusion of Cp1 (FBrf0091145) Left limit of break 2 from inclusion of Cp1 (FBrf0091145) Right limit of break 2 from non-inclusion of l(2)00248 (FBrf0091145)

Sequence Crossreferences

DDBJ / EMBL / GenBank

DNA sequence

Protein sequence

DX355318

Gene Deletion and Duplication Data

Genes Deleted / Disrupted

Complementation Data

Completely deleted / disrupted

CtsL1

(Preston et al., 1996)

l(2)50CDa