FB2026_01 , released March 12, 2026
FB2026_01 , released March 12, 2026
Aberration: Dmel\Dp(1;Y)BSC5
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General Information
Symbol
Dp(1;Y)BSC5
Species
D. melanogaster
Name
FlyBase ID
FBab0029206
Feature type
interchromosomal_duplication
Computed Breakpoints include
Features within 11B18--11D8 (Observed cytology)
Sequence coordinates
Member of large scale dataset(s)
Dps(X)BSC_set1

After generating all the Dp(1;Y)BSC chromosomes as described in FBrf0212582, we calculated the minimal euchromatic coverage of the X chromosome provided by these duplications as 97.0%.

Series of Dp(1;Y) stocks carrying segments of the X chromosome on the tip of Y chromosome; in an isogenic background. At the time of publication (FBrf0212582), the Dp(1;Y) collection provided a minimum of 78% coverage with duplication breakpoints spaced a median of nine genes apart.

(Cook, 2012.8.8, Cook et al., 2010)
Nature of Aberration
Cytological Order
Progenitor
C(1;Y)sc260-14
(Gornek et al., 2000.2.4)
Mutagen
gamma ray
(Gornek et al., 2000.2.4)
Class of aberration (relative to wild type)
interchromosomal_duplication
Class of aberration (relative to progenitor)
chromosomal_deletion
(Gornek et al., 2000.2.4)
Breakpoints

11B17;h26-h32

(Gornek et al., 2000.2.4)
Causes alleles
Carries alleles
Transposon Insertions
Formalized genetic data
Genetic mapping information
Comments
Comments on Cytology

The complementation of Df(1)IE35 by Dp(1;Y)BSC5 indicates that the distal breakpoint of Dp(1;Y)BSC5 lies between the distal end of Tis11 (11B9, X:12553395 (R5)) and the distal end of Smr (11B10, X:12578236 (R5)). This is consistent with Comparative Genomic Hybridization (CGH) microarray data which places the breakpoint between sequences in CkIα (11B7, X:12548008..12548076 (R5)) and CG15725 (11B12, X:12602220..12602288 (R5)).

(Fedic et al., 2012.12.18)

The proximal Dp(1;Y)BSC5 breakpoint lies within CG12716 (FBgn0030439) or CG32643 (FBgn0052643) or in the region between these genes in the range 11D5-6, X:12869529..12878892 (R5) based on CGH microarray data showing the duplication of sequences within CG12716 ( X:12869470..12869529 (R5)), but no duplication of sequences within CG32643 ( X:12878892..12878960 (R5)).

(Fedic et al., 2012.12.18)

The cytologically observed breakpoints may not represent the full extent of the duplicated segment, because euchromatic bands juxtaposed to centric heterochromatin may not be visible.

(Cook et al., 2010)

The polytene bands closest to the chromocenter in squashes appear to be from region 11.

(Gornek et al., 2000.2.4)
Sequence Crossreferences
DDBJ / EMBL / GenBank
DNA sequence
Protein sequence
Gene Deletion and Duplication Data
Genes Deleted / Disrupted
Complementation Data
Completely deleted / disrupted
Partially deleted / disrupted
Molecular Data
Completely deleted
Tis11
(Choi et al., 2014)
Partially deleted
Genes NOT Deleted / Disrupted
Complementation Data
 
Molecular Data
 
Genes Duplicated
Complementation Data
Completely duplicated
Smr
(Heck et al., 2012, Gornek et al., 2000.2.4)
y
(Gornek et al., 2000.2.4)
Partially duplicated
Molecular Data
Completely duplicated
Smr
(Cook et al., 2010)
Partially duplicated
Genes NOT Duplicated
Complementation Data
 
tsg
(Gornek et al., 2000.2.4)
Molecular Data
 
Affected Genes Inferred by Location (0)
    If no genes are listed here, it may be because the affected region is very large. The JBrowse insert above may show an error for the same reason, and other FlyBase tools such as CytoSearch may also fail for large regions. You can contact FlyBase for more help.
    In these cases, there will be no "Export to Hitlist" button to the left.
    Phenotypic Data
    In combination with other aberrations

    The lethality of Df(1)IE35 is rescued by Dp(1;Y)BSC5.

    (Fedic et al., 2012.12.18)
    NOT in combination with other aberrations

    Male fertile.

    (Gornek et al., 2000.2.4)
    Stocks (2)
    Notes on Origin
    Discoverer
     
    Balancer / Genotype Variants of the Aberration
     
    Separable Components
     
    Other Comments
     
    Synonyms and Secondary IDs (3)
    Reported As
    Symbol Synonym
    BSC5
    (Choi et al., 2014)
    Dp(1;Y)BSC5
    (Choi et al., 2014, Fedic et al., 2012.12.18, Heck et al., 2012, Cook et al., 2010)
    Y-BSC5
    (Heck et al., 2012)
    Name Synonyms
    Secondary FlyBase IDs
      References (7)