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General Information
Symbol
Df(2L)BSC187
Species
D. melanogaster
Name
FlyBase ID
FBab0044946
Feature type
Computed Breakpoints include

[26F3-26F3];[27A1-27A1];

Sequence coordinates
2L:6,644,119..6,644,119 (Df(2L)BSC187:bk1)
2L:6,709,113..6,709,113 (Df(2L)BSC187:bk2)
Member of large scale dataset(s)
Dfs_BSC_set2

A set of ~800 largely isogenic deficiency stocks created by FLP-induced recombination between FRT-carrying transgenic insertions; molecularly defined deletion endpoints correspond to initial location of the progenitor insertions. Designed to fill gaps in deletion coverage and breakpoint placement; also used to replace older available deficiencies that have not been molecularly mapped.

Nature of Aberration
Cytological Order
Class of aberration (relative to wild type)
Class of aberration (relative to progenitor)
Breakpoints
Causes alleles
Carries alleles
Formalized genetic data
Genetic mapping information
Comments

Breakpoint based on release 3 sequence coordinate from Thibault et al., 2004, Supplementary Table 2 (FBrf0174227) or 3 (FBrf0174228), converted to release 5 coordinate.

Breakpoint from FlyBase's release 5 sequence location of progenitor insertion.

Comments on Cytology

Exelixis, Inc. have determined the insertion site of P{XP}d10866 to be at Release 3 genomic coordinate 6701329 on chromosome arm 2L, a site predicted to be within 27A1 on both the Release 3 and Release 4 genome maps. (Note that this is not a chromosomal position predicted by the flanking sequence given in the current P{XP}d10866 insertion entry, FBti0070515.) The predicted position of PBac{WH}CG31635f04216 on the Release 4 map is 26F3. Consequently, the predicted cytological breakpoints of Df(2L)BSC187 are 26F3;27A1.

Sequence Crossreferences
DNA sequence
Protein sequence
Gene Deletion and Duplication Data
Genes Deleted / Disrupted
Complementation Data
Partially deleted / disrupted
Molecular Data
Completely deleted
Partially deleted
Genes NOT Deleted / Disrupted
Complementation Data
 
Molecular Data
 
Genes Duplicated
Complementation Data
Completely duplicated
Partially duplicated
Molecular Data
Completely duplicated
Partially duplicated
Genes NOT Duplicated
Complementation Data
 
Molecular Data
 
Affected Genes Inferred by Location
Phenotypic Data
In combination with other aberrations
NOT in combination with other aberrations
Stocks (1)
Notes on Origin
Discoverer
 
Balancer / Genotype Variants of the Aberration
 
Separable Components
 
Other Comments
 

The presence of P+PBac{XP5.WH5}BSC187 was verified using the PCR methods and primers described in FBrf0175003.

Synonyms and Secondary IDs (2)
References (10)