FB2025_04 , released October 2, 2025
Allele: Dmel\Rcd-1r07717
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General Information
Symbol
Dmel\Rcd-1r07717
Species
D. melanogaster
Name
FlyBase ID
FBal0156838
Feature type
allele
Associated gene
Associated Insertion(s)
Carried in Construct
Also Known As
P{PZ}ms(2)29F07717
Key Links
Genomic Maps

Nature of the Allele
Progenitor genotype
Associated Insertion(s)
Cytology
Description

The P{PZ}Rcd-1r07717 insertion (in the 5' UTR of Rcd-1r) results in broad (somatic and testes) expression of Rcd-1r rather than the testis-specific expression observed in wild type. In P{PZ}Rcd-1r07717 flies, the transcription start site of the most abundant Rcd-1r transcript now starts within the P{PZ} element.

The P{PZ}ms(2)29F07717 insertion maps within both CG13102 and CG9573 (overlapping genes on opposite strands).

Allele components
Component
Use(s)
Inserted element
Encoded product / tool
Mutations Mapped to the Genome
Curation Data
Variant Molecular Consequences
Associated Sequence Data
DNA sequence
Protein sequence
 
Expression Data
Reporter Expression
Additional Information
Statement
Reference
 
Marker for
Reflects expression of
Reporter construct used in assay
Human Disease Associations
Disease Ontology (DO) Annotations
Models Based on Experimental Evidence ( 0 )
Disease
Evidence
References
Modifiers Based on Experimental Evidence ( 0 )
Disease
Interaction
References
Comments on Models/Modifiers Based on Experimental Evidence ( 0 )
 
Disease-implicated variant(s)
 
Phenotypic Data
Phenotypic Class
Phenotype Manifest In
Detailed Description
Statement
Reference
External Data
Interactions
Show genetic interaction network for Enhancers & Suppressors
Phenotypic Class
Phenotype Manifest In
Additional Comments
Genetic Interactions
Statement
Reference

Male flies homozygous for the P{PZ}Rcd-1r07717 insertion, which creates alleles Rcd-1r07717 and CG1310207717, are sterile, but males heterozygous for the P{PZ}Rcd-1r07717 insertion over Df(2L)N22-14 or Df(2L)Exel6021 are fertile.

Xenogenetic Interactions
Statement
Reference
Complementation and Rescue Data
Comments
Images (0)
Mutant
Wild-type
Stocks (1)
Notes on Origin
Discoverer

Associated with: CG1310207717. Associated with: ms(2)29F07717. It is not known whether the homozygous male sterile phenotype caused by the P{PZ}ms(2)29F07717 insertion is due to an effect on CG13102 or CG9573 (or both).

Comments
Comments

P{PZ}Rcd-1r07717 is inserted in the 5' UTR of Rcd-1r. It is associated with a recessive male sterility phenotype (associated with allele ms(2)29F07717), and affects the transcription of both Rcd-1r (associated with allele Rcd-1r07717) and the neighbouring gene CG13102 (associated with allele CG1310207717). Male flies heterozygous for P{PZ}Rcd-1r07717 and a deficiency uncovering the insertion site (Df(2L)N22-14 or Df(2L)Exel6021) are fertile, suggesting that the male sterility is not caused by the P{PZ} insertion. However, homozygosity for P{PZ}Rcd-1r07717 causes mis-expression of the testis-specific Rcd-1r gene and the production of dsRNA corresponding to the overlapping region of Rcd-1r and CG13102 which may have an RNAi effect on either mRNA. Thus, mis-expression of Rcd-1r and/or RNAi-mediated knock-down of Rcd-1r/CG13102 at sufficient levels (ie. in homozygotes) could be the basis for the recessive male sterility. In summary, it is currently unclear whether or not the P{PZ}Rcd-1r07717 insertion is the cause of the male sterility associated with the chromosome.

External Crossreferences and Linkouts ( 0 )
Synonyms and Secondary IDs (2)
Reported As
Symbol Synonym
Rcd-1r07717
Name Synonyms
Secondary FlyBase IDs
    References (3)