FB2026_01 , released March 12, 2026
FB2026_01 , released March 12, 2026
Allele: Dmel\Alk1
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General Information
Symbol
Dmel\Alk1
Species
D. melanogaster
Name
FlyBase ID
FBal0157358
Feature type
allele
Associated gene
Associated Insertion(s)
Carried in Construct
Key Links
Genomic Maps

Nature of the Allele
Progenitor genotype
Cytology
Description

Amino acid replacement: Q306term.

The stop mutation causes truncation of the Alk protein at the beginning of the first 'MAM' domain

Mutations Mapped to the Genome
Curation Data
Type
Location
Additional Notes
References
Nucleotide change:

C16633654T

Amino acid change:

Q306term | Alk-PA; Q306term | Alk-PB

Reported amino acid change:

Q306term

Comment:

Site of nucleic acid difference inferred by FlyBase based on reported amino acid change

Variant Molecular Consequences
Associated Sequence Data
DNA sequence
Protein sequence
 
Expression Data
Reporter Expression
Additional Information
Statement
Reference
 
Marker for
Reflects expression of
Reporter construct used in assay
Human Disease Associations
Disease Ontology (DO) Annotations
Models Based on Experimental Evidence ( 0 )
Disease
Evidence
References
Modifiers Based on Experimental Evidence ( 1 )
Disease
Interaction
References
ameliorates  neurofibromatosis
Comments on Models/Modifiers Based on Experimental Evidence ( 0 )
 
Disease-implicated variant(s)
 
Phenotypic Data
Phenotypic Class
Phenotype Manifest In
Detailed Description
Statement
Reference

Alkts/Alk1 flies raised at 18[o] do not have significant changes in body length.

When sleep is measured using single beam monitors at the permissive temperature (18[o]C), Alkts/Alk1 females have a mild but significant increase in total sleep compared to controls (no significant changes in males); acute inhibition of Alk at the restrictive temperature (29[o]C) in Alkts/Alk1 flies leads to significant increases in sleep amount compared to controls (no effect in Alkts/+ females, a small but significant increase in males).

When sleep is measured using multi-beam monitors at 18[o]C, Alkts/Alk1 flies have similar total sleep amount as controls, but at 29[o]C show significant total sleep increases (both day and night). At 29[o]C both Alkts/Alk1 and Alk1/+ females have significant decreases in waking activity and show normal geotaxis activity.

Alkts/Alk1 raised at 18[o]C maintain locomotor rhythms at 29[o]C in darkness.

Alkts fails to complement Alk1 lethality at 29[o]C and shows a mutant midgut phenotype. Alk1/Alkts animals show larval lethality at 25[o]C.

Alk1/Alkts animals can be effectively maintained to third instar or pupal stages by initial rearing at 18[o]C for 48-72 hours from egg laying, followed by subsequent rearing at 25[o]C to the third larval instar. Excitatory junctional current (EJC) amplitude is increased by 210% compared to controls in Alk1/Alkts third instar larvae raised under these conditions.

Homozygous Alk1 mutant longitudinal visceral muscle (LVM) founder cells in stage 12 embryos migrate normally towards the trunk visceral mesoderm (TVM) and very few dying cells are seen. At stage 13 the front migrating cells reach the anterior end of the trunk visceral mesoderm as in wild type. However during late stage 13 the migration becomes disordered and progressive founder cell death is seen.

Alk1 heterozygous pupae are normal in size.

The central nervous system of Alk1 mutants appears morphologically normal in terms of segmental nerve branching and segmental muscle patterning. Neuropil synaptic differentiation appears normal in these mutants, with comparable labeling intensity, density and distribution of presynaptic and postsynaptic labels.

Alk1 mutant neuromuscular junctions appear correctly and stereotypically formed and elaborated, with no examples of muscle innervation failure or synaptic targeting errors. mutant presynaptic active zones appear normally formed and with wild-type size.

Homozygous Alk1 mutants exhibit reduced hatching and mutant larval movement is typically sluggish and highly limited. Locomotory movement in Alk1 mutants is decreased to 35% of the control level, characterised by slower contractions and extended pauses. Severely impaired and motionless larvae remain capable of briefly resuming movement when stimulated, suggesting a defect in the central circuit output driving locomotion.

Alk1 mutant neuromuscular junctions exhibit visible glutamate-driven muscle contractions, and consistently large and robust postsynaptic current amplitudes compared to controls.

In Alk1 mutant neuromuscular junctions, no large or patterned EJCs are recorded (maximum amplitude 429nA), and overall EJC frequency is below 1Hz in 80% of active cells.

R cells, target neurons and glia are normal in Alk1 eye mosaic clones.

Third instar larvae that have Alk function removed in the lamina target neurons, by the presence of Alk1 clones, show normal R cell guidance. Additionally, adults with eyes made mutant for Alk1 by the presence of clones show no R cell guidance defects.

Adult mosaic Alk1 animals, in which lamina target neurons are mutant for Alk1, show R8 axon guidance defects. R8 cells exhibit thickened terminals and frequently fail to terminate in their appropriate layer. These axons either project into the R7 layer (7%), stop at the distal border of the medulla neuropil (12%), or project to neighbouring columns (9%). The vast majority of R7 terminals target normally but a small proportion extend into an adjacent medulla column.

At the pupal stage, animals with lamina target neuron Alk1 clones exhibit normal R cell projections up to 40 hours after puparium formation. At around 55 hours, R cell projection defects become apparent. These include thickened terminals, fasciculation with neighbouring columns and stalling of the axons at the distal medulla neuropil border ot projection into an adjacent column.

In adults carrying Alk1 clones in the lamina target neurons, the array of cartridges consisting of R1-R6 terminals in the lamina is disrupted and the size and shape of lamina cartridges is variable. Cartridges containing homozygous mutant target lamina are likely to be distributed randomly throughout the lamina.

The visceral mesoderm is disrupted in stage 14 Alk1 embryos.

Alk1 homozygous larvae do not ingest food, and lack discernible intestinal structures. In stage 13 Alk1 homozygous embryos, the visceral mesoderm is disorganized. At stage 11, the earliest stage at which a mutant phenotype in the visceral mesoderm can clearly be observed, these embryos lack muscle founder cells. However, myoblasts do form in the visceral mesoderm, and go on to contribute to somatic muscle (i.e.- they are fusion competent.)

55% of Alk1/+ mutants die as embryos and the rest die as first-instar larvae.

Alk1 first-instar larvae are unable to eat as the visceral mesoderm is severely disrupted and no functional midgut is formed.

External Data
Interactions
Show genetic interaction network for Enhancers & Suppressors
Phenotypic Class
Suppressor of
Statement
Reference

Alk1/Alk[+] is a suppressor | partially of abnormal size | pupal stage phenotype of Nf1E2

Alk1/Alk[+] is a suppressor | partially of abnormal learning | adult stage phenotype of Nf1E2

NOT Suppressor of
Statement
Reference
Other
Statement
Reference
Phenotype Manifest In
Additional Comments
Genetic Interactions
Statement
Reference

Nf1P1/Nf1P2 mutations suppress (to different degrees) the long sleep phenotype seen in Alkts/Alk1 males and females at different temperatures (18, 25 or 29[o]C). In male flies, Alkts/Alk1;Nf1P1/Nf1P2 double mutants even sleep significantly less than wild type flies.

Alkts/Alk1 does not suppress arrhythmicity (in dark conditions) in Nf1P1/Nf1P2 flies.

One copy of Alk1 partially suppresses the small pupae phenotype seen in Nf1E2 homozygotes by increasing cell size. The Nf1E2 olfactory learning phenotype is also partially rescued.

Xenogenetic Interactions
Statement
Reference
Complementation and Rescue Data
Comments

Alkts fails to complement Alk1 lethality at 29[o]C and fully complements Alk1 at 18[o]C. At 25[o]c, Alk1/Alkts animals show larval lethality.

Images (0)
Mutant
Wild-type
Stocks (0)
Notes on Origin
Discoverer

Induced on: P{neoFRT}42D chromosome.

Selected as: a mutant that fails to complement the Df(2R)Alk-21 deficiency.

External Crossreferences and Linkouts ( 0 )
Synonyms and Secondary IDs (3)
References (18)