FlyBase Allele Report: Dmel\asRNA:CR43467[HMJ22886]

General Information

Symbol

Dmel\asRNA:CR43467^HMJ22886

Species

D. melanogaster

Name

FlyBase ID

FBal0357252

Feature type

allele

Associated gene

Dmel\asRNA:CR43467

Associated Insertion(s)

Carried in Construct

P{TRiP.HMJ22886}

Key Links

Genomic Maps

JBrowse

Transgenic product class

RNAi_reagent

(Shimada et al., 2020)

Mutagen

in vitro construct

Nature of the Allele

Transgenic product class

RNAi_reagent

(Shimada et al., 2020)

Mutagen

in vitro construct

(Shimada et al., 2020)

Progenitor genotype

Carried in construct

P{TRiP.HMJ22886}

Cytology

Description

UAS regulatory sequences drive expression of a short inverted repeat.

(Shimada et al., 2020)

Allele components

Component

Use(s)

Regulatory region(s)

UAS

binary expression system - regulatory region

Encoded product / tool

dsRNA-HMJ22886

Also carries

loxP

recombinase target site

Mutations Mapped to the Genome

Curation Data

Type

Location

Additional Notes

References

Variant Molecular Consequences

Associated Sequence Data

DDBJ / EMBL / GenBank

DNA sequence

Protein sequence

UniProtKB/Swiss-Prot

UniProtKB/TrEMBL

Expression Data

Reporter Expression

Additional Information

Statement

Reference

Marker for

Reflects expression of

Reporter construct used in assay

Human Disease Associations

Disease Ontology (DO) Annotations

Models Based on Experimental Evidence ( 0 )

Disease

Evidence

References

Modifiers Based on Experimental Evidence ( 1 )

Disease

Interaction

References

ameliorates Charcot-Marie-Tooth disease type 4J

modeled by FIG4^KK102943

(Shimada et al., 2020)

Comments on Models/Modifiers Based on Experimental Evidence ( 0 )

Disease-implicated variant(s)

Phenotypic Data

Phenotypic Class

Phenotype Manifest In

Detailed Description

Statement

Reference

External Data

Linkouts

Interactions

Show genetic interaction network for Enhancers & Suppressors

Phenotypic Class

Suppressor of

Statement

Reference

asRNA:CR43467^HMJ22886, Scer\GAL4^GMR.PU is a suppressor | partially of visible | adult stage phenotype of Mtpβ^HMS01017, Scer\GAL4^GMR.PU

(Shimada et al., 2020)

asRNA:CR43467^HMJ22886, Scer\GAL4^GMR.PU is a suppressor | partially of visible | adult stage phenotype of Pdhb^KK107865, Scer\GAL4^GMR.PU

(Shimada et al., 2020)

asRNA:CR43467^HMJ22886, Scer\GAL4^GMR.PU is a suppressor | partially of visible | adult stage phenotype of Coa7^GD8140, Scer\GAL4^GMR.PU

(Shimada et al., 2020)

asRNA:CR43467^HMJ22886, Scer\GAL4^GMR.PU is a suppressor | partially of visible | adult stage phenotype of Coa7^HMJ22518, Scer\GAL4^GMR.PU

(Shimada et al., 2020)

asRNA:CR43467^HMJ22886, Scer\GAL4^GMR.PU is a suppressor | partially of visible | adult stage phenotype of Mtpβ^KK109341, Scer\GAL4^GMR.PU

(Shimada et al., 2020)

asRNA:CR43467^HMJ22886, Scer\GAL4^GMR.PU is a suppressor of visible | adult stage phenotype of FIG4^KK102943, Scer\GAL4^GMR.PU

(Shimada et al., 2020)

asRNA:CR43467^HMJ22886, Scer\GAL4^nSyb.PU is a suppressor | partially of abnormal neuroanatomy | third instar larval stage phenotype of FIG4^KK102943, Scer\GAL4^nSyb.PU

(Shimada et al., 2020)

Phenotype Manifest In

Suppressor of

Statement

Reference

asRNA:CR43467^HMJ22886, Scer\GAL4^GMR.PU is a suppressor | partially of eye phenotype of Mtpβ^HMS01017, Scer\GAL4^GMR.PU

(Shimada et al., 2020)

asRNA:CR43467^HMJ22886, Scer\GAL4^Lsp2.PH is a suppressor of embryonic/larval fat body | third instar larval stage phenotype of FIG4^KK102943, Scer\GAL4^Lsp2.PH

(Shimada et al., 2020)

asRNA:CR43467^HMJ22886, Scer\GAL4^GMR.PU is a suppressor of eye phenotype of Pdhb^KK107865, Scer\GAL4^GMR.PU

(Shimada et al., 2020)

asRNA:CR43467^HMJ22886, Scer\GAL4^GMR.PU is a suppressor | partially of eye phenotype of Coa7^GD8140, Scer\GAL4^GMR.PU

(Shimada et al., 2020)

asRNA:CR43467^HMJ22886, Scer\GAL4^GMR.PU is a suppressor | partially of eye phenotype of Coa7^HMJ22518, Scer\GAL4^GMR.PU

(Shimada et al., 2020)

asRNA:CR43467^HMJ22886, Scer\GAL4^GMR.PU is a suppressor | partially of eye phenotype of Mtpβ^KK109341, Scer\GAL4^GMR.PU

(Shimada et al., 2020)

asRNA:CR43467^HMJ22886, Scer\GAL4^GMR.PU is a suppressor of eye phenotype of FIG4^KK102943, Scer\GAL4^GMR.PU

(Shimada et al., 2020)

asRNA:CR43467^HMJ22886, Scer\GAL4^nSyb.PU is a suppressor | partially of embryonic/larval neuromuscular junction | third instar larval stage phenotype of FIG4^KK102943, Scer\GAL4^nSyb.PU

(Shimada et al., 2020)

asRNA:CR43467^HMJ22886, Scer\GAL4^nSyb.PU is a suppressor | partially of NMJ bouton | third instar larval stage phenotype of FIG4^KK102943, Scer\GAL4^nSyb.PU

(Shimada et al., 2020)

asRNA:CR43467^HMJ22886, Scer\GAL4^Lsp2.PH is a suppressor of lysosome | third instar larval stage phenotype of FIG4^KK102943, Scer\GAL4^Lsp2.PH

(Shimada et al., 2020)

Additional Comments

Genetic Interactions

Statement

Reference

Xenogenetic Interactions

Statement

Reference

Complementation and Rescue Data

Comments

Images (0)

Mutant

Wild-type

Stocks (2)

Bloomington

60492

y¹ v¹; P{TRiP.HMJ22886}attP40

NIG-Fly

HMJ22886

y¹ v¹; P{TRiP.HMJ22886}attP40/CyO

Notes on Origin

Discoverer

Comments

P{TRiP.HMJ22886} targets both asRNA:CR43467 and Or46a as they are located on the same genomic position, though code in opposite directions.

(Shimada et al., 2020)

External Crossreferences and Linkouts ( 0 )

Synonyms and Secondary IDs (1)

Reported As

Symbol Synonym

asRNA:CR43467^HMJ22886

Name Synonyms

Secondary FlyBase IDs

References (1)

Report Sections

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