FB2026_02 , released June 18, 2026
Human Disease Model Report: azoospermia (postulated), SNRPA1-related
Open Close
General Information
Name
azoospermia (postulated), SNRPA1-related
FlyBase ID
FBhh0000429
Disease Ontology Term
Parent Disease
OMIM
Overview

Identified in a GWAS analysis of Chinese men with non-obstructive azoospermia (FBrf0232613), the human gene SNRPA1 is proposed as a candidate gene for involvement in human male fertility. SNRPA1 encodes one of the protein constituents of the U2 snRNP (small nuclear ribonucleoprotein) component of the spliceosome. There is a single fly ortholog, U2A, for which a classical loss-of-function alleles and RNAi-targeting constructs have been generated.

An amorphic mutation of Dmel\U2A is a recessive lethal. Targeted loss of U2A during spermatogenesis results in accumulation of mitotic spermatogonia that fail to differentiate into spermatocytes and mature sperm.

UAS constructs of the human Hsap\SNRPA1 have been introduced into flies, including wild-type and mutant forms. Heterologous rescue (functional complementation) has been demonstrated: ubiquitous expression of wild-type Hsap\SNRPA1 rescues the lethal phenotype of a U2A null mutant. Variant(s) implicated in human disease tested (as transgenic human gene, SNRPA1): the Q148R variant form has been introduced into flies; this mutant form acts as a dominant negative in flies, disrupting spermatogenesis when expressed in germline cells.

Genetic and physical interactions of Dmel\U2A have been described; see below and in the U2A gene report.

[updated Jul. 2017 by FlyBase; FBrf0222196]

Disease Summary Information
Parent Disease Summary: azoospermia, non-obstructive
Symptoms and phenotype

Non-obstructive azoospermia (NOA) is defined as absence of any measurable level of sperm in semen, resulting from a defect in the production of spermatozoa in the testes. [from MedGen, Non-obstructive azoospermia; MedGen UID: 866757]

Non-obstructive azoospermia (NOA), or failure of spermatogenesis within the testis, is diagnosed in approximately 10% of infertile men. NOA may be due to a lack of appropriate stimulation by gonadotropins, in which case hormonal therapy is usually effective. A larger category of non-obstructive azoospermia consists of men with an intrinsic testicular impairment. In these cases, the primary approach is to improve the quantity and quality of sperm retrieved from the testis for use for in vitro fertilization (Kumar, 2013; PMCID:PMC3583162).

Specific Disease Summary: azoospermia (postulated), SNRPA1-related
OMIM report
Human gene(s) implicated
Symptoms and phenotype

Observation of non-obstructive azoospermia (NOA).

Genetics

Locus identified in a genome-wide association study (GWAS) of non-obstructive azoospermia.

Cellular phenotype and pathology

Based on phenotype in Drosophila (targeted loss of Dmel\U2A during spermatogenesis results in accumulation of mitotic spermatogonia that fail to differentiate into spermatocytes and mature sperm), it is postulated spliceosome defects and resulting defects in mRNA processing may contribute to nonobstructive azoospermia.

Molecular information

SNRPA1 encodes one of the specific protein constituents of the U2 snRNP (small nuclear ribonucleoprotein) component of the slicesome. [from MIM:603521; 2016.11.03]

External links
Disease synonyms
male infertility
non-obstructive azoospermia
spermatogenic failure
Ortholog Information
Human gene(s) in FlyBase
Human gene (HGNC)
D. melanogaster ortholog (based on DIOPT)
Comments on ortholog(s)

One to one: 1 human to 1 Drosophila.

Other mammalian ortholog(s) used
    D. melanogaster Gene Information (1)
    Gene Snapshot
    U2A (U2A) encodes a protein component of the U2 snRNP, which combines with other snRNPs on the pre-mRNA to assemble a spliceosome. [Date last reviewed: 2019-03-14]
    Molecular function (GO)
    Gene Groups / Pathways
    Comments on ortholog(s)

    Ortholog of human SNRPA1 (1 Drosophila to 1 human). Dmel\U2A shares 52% identity and 67% similarity with human SNRPA1.

    Orthologs and Alignments from DRSC
    DIOPT - DRSC Integrative Ortholog Prediction Tool - Click the link below to search for orthologs in Humans
    Other Genes Used: Viral, Bacterial, Synthetic (0)
      Summary of Physical Interactions (17 groups)
      protein-protein
      Interacting group
      Assay
      References
      pull down, western blot
      experimental knowledge based
      anti tag coimmunoprecipitation, peptide massfingerprinting
      experimental knowledge based
      experimental knowledge based
      experimental knowledge based
      anti bait coimmunoprecipitation, western blot, nuclear magnetic resonance, anti tag coimmunoprecipitation, peptide massfingerprinting, isothermal titration calorimetry, predetermined participant, pull down, two hybrid, experimental knowledge based, x-ray crystallography
      experimental knowledge based
      pull down, western blot, two hybrid, anti bait coimmunoprecipitation
      anti tag coimmunoprecipitation, peptide massfingerprinting
      RNA-protein
      Interacting group
      Assay
      References
      anti tag coimmunoprecipitation, primer specific pcr
      anti bait coimmunoprecipitation, northern blot
      anti bait coimmunoprecipitation, northern blot
      anti bait coimmunoprecipitation, northern blot
      anti bait coimmunoprecipitation, northern blot
      anti bait coimmunoprecipitation, northern blot
      anti bait coimmunoprecipitation, northern blot
      Alleles Reported to Model Human Disease (Disease Ontology) (1 alleles)
      Models Based on Experimental Evidence ( 1 )
      Allele
      Disease
      Evidence
      References
      Modifiers Based on Experimental Evidence ( 0 )
      Allele
      Disease
      Interaction
      References
      Alleles Representing Disease-Implicated Variants
      Genetic Tools, Stocks and Reagents
      Sources of Stocks
      Contact lab of origin for a reagent not available from a public stock center.
      Bloomington Stock Center Disease Page
      Related mammalian, viral, bacterial, or synthetic transgenes
      Allele
      Transgene
      Publicly Available Stocks
      Selected Drosophila transgenes
      Allele
      Transgene
      Publicly Available Stocks
      RNAi constructs available
      Allele
      Transgene
      Publicly Available Stocks
      Selected Drosophila classical alleles
      Allele
      Allele class
      Mutagen
      Publicly Available Stocks
      loss of function allele
      ethyl methanesulfonate
      References (5)