FB2026_02 , released June 18, 2026
Physical Interaction report
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General Information
Interaction Type
Interacting Genes
FlyBase ID
FBig0000095623
Interaction Network
Interactions Browser links
Su(z)12 network
E(z) network
Reported Interactions
FBrf0151814-3.CH.WB
Description
physical association
Collection
Cell line used
Participants
Corresponds to
Reported as
Role
Note

Su(z)12

neutral component

Su(z)12

neutral component

Su(z)12

neutral component
E(z) 

E(z)

neutral component
E(z) 

E(z)

neutral component
E(z) 

E(z)

neutral component
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was embryonic nuclear extract wild-type fly line; proteins produced from endogenous genes.

The complex of Su(z)12, E(z), Rpd3, esc and Caf1 has an apparent size of 600-650 kDa (gel filtration).

A histone methyltransferase activity was purified from embryonic nuclear extracts.

FBrf0151815-15.ENZ.A
Reference
Description
Assay
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
E(z) 

E(Z)

enzyme
E(z) 

E(Z)

enzyme

SU(Z)12

enzyme target

[3]H label

SU(Z)12

enzyme target

[3]H label

Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction
FBrf0151815-6.coIP.WB
Description
physical association
Collection
Cell line used
Participants
Corresponds to
Reported as
Role
Note

SU(Z)12

bait
E(z) 

E(Z)

prey
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was embryonic nuclear extract of transgenic fly line; bait produced from endogenous gene; prey produced from endogenous gene.

Su(z)12 and E(z) cofractionate in a complex of about 600 kDa (as determined by gel filtration).

FBrf0151815-8.coIP.WB
Description
physical association
Collection
Cell line used
Participants
Corresponds to
Reported as
Role
Note
E(z) 

E(Z)

bait

SU(Z)12

prey
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was embryonic nuclear extract of transgenic fly line; bait produced from endogenous gene; prey produced from endogenous gene.

Su(z)12 and E(z) cofractionate in a complex of about 600 kDa (as determined by gel filtration).

FBrf0159213-17.coIP.WB
Reference
Description
physical association
Collection
Cell line used
Participants
Corresponds to
Reported as
Role
Note

SU(Z)12

bait
E(z) 

E(Z)

prey
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was embryonic nuclear extract of wild-type fly line; bait produced from endogenous gene; prey produced from endogenous gene.

Su(z)12 and E(z) are present in complexes of about 600 kDa or 1 MDa. The larger 1 MDa PRC2 complex is only observed in 0-16 hr embryos, not in 18-24 hr embryos.

Immunoprecipitation of Su(z)12 from size fractionated extracts containing complexes of about 600 kDa or 1 MDa in size.

FBrf0159213-9.coIP.WB
Reference
Description
physical association
Collection
Cell line used
Participants
Corresponds to
Reported as
Role
Note
E(z) 

E(Z)

bait

SU(Z)12

prey
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was embryonic nuclear extract of wild-type fly line; bait produced from endogenous gene; prey produced from endogenous gene.

FBrf0187520-1.coIP.MW
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
E(z) 

E(z)

bait

FLAG tag

Su(z)12

prey
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Purified proteins visualized by Coomassie staining.

The E(z), Caf1, Su(z)12 and esc proteins interact as part of the tetrameric Polycomb repressive complex 2 (PRC2) complex.

Analysis of direct interactions suggests that E(z), Caf1, Su(z)12 proteins form a core trimeric complex (all paiwise interactions detected) to which esc protein binds via direct interaction with E(z).

Source was extract of Sf9 cell line; bait produced from transfected construct; prey produced from transfected construct.

FBrf0187520-4.coIP.MW
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note

Su(z)12

bait

FLAG tag

E(z) 

E(z)

prey
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Purified proteins visualized by Coomassie staining.

The E(z), Caf1, Su(z)12 and esc proteins interact as part of the tetrameric Polycomb repressive complex 2 (PRC2) complex.

Analysis of direct interactions suggests that E(z), Caf1, Su(z)12 proteins form a core trimeric complex (all paiwise interactions detected) to which esc protein binds via direct interaction with E(z).

Source was extract of Sf9 cell line; bait produced from transfected construct; prey produced from transfected construct.

FBrf0188105-4.PD.MW
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note

Su(z)12

bait

FLAG tag

E(z) 

E(z)

prey
E(z) 
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
E(z) 
domain II residue 363
mutation decreasing interaction
aa 363
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Affinity purification of the esc-E(z) complex in Fig2 and 3 was carried out from a mixture of esc, E(z), Su(z)12, and Caf1-55 recombinant proteins. Affinity purification in Fig3 was from a pairwise mixture of E(z) and Su(z)12. E(z) II domain C363Y results in loss of esc and reduction of E(z) from the complex.

Interaction in vitro; bait and prey produced recombinant fusion proteins in baculovirus and insect cell system.

FBrf0188105-7.PD.MW
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
E(z) 

E(z)

bait

FLAG tag

Su(z)12

prey
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Affinity purification of the esc-E(z) complex was carried out from a mixture of esc, E(z), Su(z)12, and Caf1-55 recombinant proteins.

Interaction in vitro; bait and prey produced recombinant fusion proteins in baculovirus and insect cell system.

FBrf0201936-22.CH.WB
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
E(z) 

E(Z)

neutral component
E(z) 

E(Z)

neutral component
E(z) 

E(Z)

neutral component

SU(Z)12

neutral component

SU(Z)12

neutral component

SU(Z)12

neutral component
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was cell extract of Kc cell line; proteins produced from endogenous genes.

FBrf0201936-28.CH.WB
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
E(z) 

E(Z)

neutral component
E(z) 

E(Z)

neutral component
E(z) 

E(Z)

neutral component

SU(Z)12

neutral component

SU(Z)12

neutral component

SU(Z)12

neutral component
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was embryos of wild-type fly line; bait produced from endogenous gene; prey produced from endogenous gene.

FBrf0201936-32.CH.WB
Description
physical association
Collection
Cell line used
Participants
Corresponds to
Reported as
Role
Note
E(z) 

E(Z)

neutral component
E(z) 

E(Z)

neutral component
E(z) 

E(Z)

neutral component

SU(Z)12

neutral component

SU(Z)12

neutral component

SU(Z)12

neutral component
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was larvae of wild-type fly line; bait produced from endogenous gene; prey produced from endogenous gene.

FBrf0205395-1.coIP.MW
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
E(z) 

E(z)

bait

FLAG tag

Su(z)12

prey

His tag

Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was cell extract of Sf9 cell line; bait produced from baculovirus construct; prey produced from baculovirus construct.

PRC2 complexes were reconstituted from cells infected with baculoviruses for E(z), Su(z)12, Caf1-55 and esc or escl.

FBrf0208990-1.coIP.MW
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
E(z) 

E(Z)

bait

FLAG tag

SUZ12

prey
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was cell extract of Sf9 cell line; bait produced from recombinant baculovirus construct; prey produced from recombinant baculovirus construct.

FBrf0218406-7.coIP.WB
Reference
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note

SU(Z)12

bait
E(z) 

E(Z)

prey
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Positive control.

Bait endogenous to embryonic nuclear extract.

Prey endogenous to embryonic nuclear extract.

FBrf0219425-1.CH.MW
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note

Su(z)12

neutral component

Su(z)12

neutral component

Su(z)12

neutral component
E(z) 

E(z)

neutral component
E(z) 

E(z)

neutral component
E(z) 

E(z)

neutral component
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
VEFS-BOX
sufficient binding region
aa 507-630
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Su(z)12, E(z), Caf1 and esc were coexpressed in Sf9 cells and purified as a complex.

Source was baculovirus-infected Sf9 cell extract; proteins produced from transfected constructs.

Su(z)12, E(z), Caf1 and esc form the PRC2 (Polycomb repressive complex 2).

Residues 507-630 of Su(z)12 are sufficient for the formation of a PRC2 complex lacking Caf1.

FBrf0223458-5a.ENZ.A
Reference
Description
Assay
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
E(z) 

E(Z)

enzyme

GST tag

E(z) 

E(Z)

enzyme

GST tag

SU(Z)12

enzyme regulator

SU(Z)12

enzyme regulator
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction
FBrf0223458-6.coIP.WB
Reference
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
E(z) 

E(Z)

bait

SU(Z)12

prey

HA tag

Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Zinc Finger
necessary binding region
aa 405-444
Zinc Finger P414 W415
mutation disrupting interaction
aa 414-415

P414A, W415A

Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was embryos of transgenic fly line; bait produced from endogenous gene; prey produced from tagged transgenic construct.

The Su(z)12 zinc finger is not required for PRC2 complex assembly or HMTase activity in vitro, but it is required for interaction in vivo, and for Su(z)12 mutant rescue. PRC2 complexes lacking the Su(z)12 Zinc Finger show diminished chromatin binding as determined by ChIP.

FBrf0227292-565.TFIN
Description
physical association
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
E(z) 
unspecified role
E(z) 
unspecified role
E(z) 
unspecified role
unspecified role
unspecified role
unspecified role
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was cell extract of S2R+ cell line; proteins produced from transfected construct or endogenous gene.

HGScore = 37.889209

FBrf0228678-15.TAP.MS
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
E(z) 

E(z)

bait

BioTAP tag

Su(z)12

prey

113 peptide counts

Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was embryos of transgenic fly line; bait produced from tagged transgenic construct; prey produced from endogenous gene.

FBrf0238257-4.coIP.WB
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
E(z) 

E(Z)

bait

HA tag

SU(Z)12

prey
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was cell extract of S2 cell line; bait produced from transfected construct; prey produced from endogenous gene.

External Crossreferences and Linkouts ( 1 )
Linkouts
MIST - An integrated Molecular Interaction Database
References (14)