FB2026_02 , released June 18, 2026
Physical Interaction report
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General Information
Interaction Type
Interacting Genes
FlyBase ID
FBig0000097169
Interaction Network
Interactions Browser links
N network
Delta network
Reported Interactions
FBrf0051377-1.BA.FM
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
N 

N

bait
N 
N 

Dl

prey
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
N 
EGF repeats 11 and 12
sufficient binding region
N 
EGF repeats 11 and 12
necessary binding region
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was intact S2 cells; bait produced from transfected construct; prey produced from transfected construct.

The N-Dl interaction requires Ca[2+].

S2 cells expressing N were mixed with S2 cells expressing Dl, and the formation of cell clusters containing both N and Dl expressing cells was assayed by immunofluorescence.

FBrf0051377-2.coIP.WB
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note

Dl

bait
N 

N

prey
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was cell extract of S2 cell line; bait produced from transfected construct; prey produced from transfected construct.

FBrf0051377-3.coIP.WB
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note

Dl

bait
N 

N

prey
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was embryos of wild-type fly line; bait produced from endogenous gene; prey produced from endogenous gene.

FBrf0053391-1.BA.FM
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
N 

N

bait
N 
N 

Dl

prey
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
N 
EGF repeats 11 and 12
sufficient binding region
N 
EGF repeats 11 and 12
necessary binding region
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was intact S2 cells; bait produced from transfected construct; prey produced from transfected construct.

The N-Dl interaction requires Ca[2+].

S2 cells expressing N were mixed with S2 cells expressing Dl, and the formation of cell clusters containing both N and Dl expressing cells was assayed by immunofluorescence.

FBrf0111069-1.coIP.WB
Reference
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note

Dl

bait
N 

N

prey
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was cell extract of S2 cell line; bait produced from transfected construct; prey produced from transfected construct.

FBrf0111069-6.coIP.WB
Reference
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note

Dl

bait
N 

N

prey
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Full-length N interacts with Dl in 0-3 hr embryos.

Source was embryos of wild-type fly line; bait produced from endogenous gene; prey produced from endogenous gene.

FBrf0127388-1.coIP.WB
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note

Dl

bait
N 

N

prey
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was embryos of wild-type fly line; bait produced from endogenous gene; prey produced from endogenous gene.

FBrf0129748-1.AT.AP
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
N 

Notch

bait

Delta

prey

AP tag

Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Interaction in vitro; bait produced from transfected construct; prey produced from conditioned medium of stably transfected cell line.

Binding of Dl to N was greatly increased by cotransfection of N with fng.

S2 cells expressing N were incubated with Dl-conditioned medium, then analyzed for surface-bound alkaline phosphatase activity.

FBrf0129748-2.AT.AP
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note

Delta

bait
N 

Notch

prey

AP tag

Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Interaction in vitro; bait produced from transfected construct; prey produced from conditioned medium of stably transfected cell line.

Binding of N to Dl was greatly increased by cotransfection of N with fng during production of conditioned medium.

S2 cells expressing Dl were incubated with N-conditioned medium, then analyzed for surface-bound alkaline phosphatase activity.

FBrf0184061-1.AFM
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
N 

N

neutral component
N 

N

neutral component
N 
N 
N 
N 
N 
N 

N

neutral component
N 
N 
N 
N 
N 

Dl

neutral component

Dl

neutral component

Dl

neutral component
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
N 
Dl binding site
necessary binding region
aa 1-18
N 
EGF like repeat region
mutation decreasing interaction
aa 105aa 972

C105F

C972YS

N 
Carboxyl terminal half
mutation decreasing interaction
aa 2156-2703

protein truncated at aa 2156.

N 
extracellular domain
mutation decreasing interaction
aa 19-36

deletion of aa 19-36

N 
intracellular domain
mutation decreasing interaction
aa 1790-2648

deletion of intracellular domain.

Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was live S2 cells; proteins produced from transfected constructs.

N did not interact with itself in this experiment.

FBrf0184061-2.BA.FM
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
N 

N

neutral component
N 

N

neutral component
N 
N 
N 
N 

N

neutral component
N 
N 
N 

Dl

neutral component

Dl

neutral component

Dl

neutral component
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
N 
Carboxyl terminal half
mutation decreasing interaction
aa 2156-2703

protein truncated at aa 2156.

N 
EGF like repeat region
mutation decreasing interaction
aa 105

C105F

N 
Dl binding site
necessary binding region
aa 1-18
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was live S2 cells; proteins produced from transfected constructs.

Physical interaction of proteins expressed on the surface of cells is inferred from the aggregation of live cells.

FBrf0193509-1.BA.FM
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note

Dl

neutral component

Dl

neutral component

Dl

neutral component
N 

N

neutral component
N 

N

neutral component
N 

N

neutral component
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
N terminal deletions
necessary binding region
aa 32-198aa 192-331
N terminal portion
sufficient binding region
aa 22-618
Delta residue A132
mutation disrupting interaction
aa 132

Replacement of A132 with the pentapeptide sequence GKIFP.

Insertion mutations at aa 198-199
mutation disrupting interaction
aa 198-199

Insertion of the tetrapeptide sequence KIFR between R198 and P199.

ELR2 motif
mutation disrupting interaction
aa 288

C288Y

Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was live S2 cells; proteins produced from transfected constructs.

Physical interaction of proteins expressed on the surface of cells is inferred from the aggregation of live cells.

FBrf0202801-1.PD.TV
Reference
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
N 

Notch

bait

FLAG tag

N 

Dl

prey

AP tag

Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
N 
36 EGF domains
sufficient binding region
aa 66-1452
DSL motif and all EGF domains
sufficient binding region
aa 1-592
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Interaction in vitro; bait and prey produced as a recombinant fusion proteins in S2 cells

Binding of N to Dl is increased in the presence of expressed fng.

FBrf0202801-3.AT.TV
Reference
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note

Dl

bait
N 

Notch

prey

AP tag

N 
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
N 
EGF domains
sufficient binding region
aa 1-1467
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

ligand expressed on the surface of S2 cells (bait), AP tagged N purified from transfected S2 cells (prey).

Binding of N to Dl is increased in the presence of expressed fng.

FBrf0204682-1.ELISA
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
N 

N

bait

V5, His tag

N 

Dl

prey

Fc tag

Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
N 
interaction domain
sufficient binding region
aa 447-605

EGF repeats 11-14

interaction domain
sufficient binding region
aa 19-560
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Interaction in vitro; bait purified from media of transfected S2 cells; prey purified from media of transfected S2 cells.

The N-Dl interaction is stronger at pH 5.4 than at pH 7.4.

FBrf0204793-1.PBD
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
N 

N

bait

Alkaline Phosphatase tag

Dl

prey
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was cell extract of S2 cell line; bait produced from transfected construct; prey produced from transfected construct.

FBrf0220110-2.AT.TV
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
N 

N

bait

fused to mammalian CD2 transmembrane domain

N 
N 

Dl

prey

alkaline phosphatase tag

Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
N 
extracellular domain
sufficient binding region
N 
EGF repeat-8
mutation increasing interaction
aa 361

V361M, corresponds to N[jigsaw] allele

extracellular domain
sufficient binding region
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was cell extract of S2 cell line; bait produced from transfected construct; prey produced from transfected construct.

Binding of N to Dl is slightly increased by the N V361M mutation, which disrupts the N-Ser interaction.

Alkaline-phosphatase-tagged Dl was collected from conditioned media and mixed with S2 cells expressing N. After extensive washing of cells, the amount of alkaline phosphatase bound to cells was measured.

FBrf0244020-1.AT.FM
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
N 

N

bait

fused to CD2

N 

Dl

prey

Myc, His tag

Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
N 
EGF repeats 1-36
sufficient binding region
extracellular domain
sufficient binding region
aa 1-592
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was live S2 cells; bait produced from transfected construct; prey purified from medium of transfected cells.

Co-expression of fng with N enhanced Dl binding; fng glycosyltransferase activity was required for enhancement; mutation of N O-fucosylation sites, T348V, T386V, S502A, decrease fng mediated enhancement of N-Dl binding.

FBrf0244020-3.BA.FM
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
N 

N

neutral component
N 
N 

N

neutral component
N 
N 

N

neutral component

Dl

neutral component

Dl

neutral component

Dl

neutral component
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
N 
EGF repeat 12 residue 502
mutation decreasing interaction
aa 502

S502A

Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was live S2 cells; proteins produced from transfected constructs.

Physical interaction of proteins expressed on the surface of cells is inferred from the aggregation of live cells. Co-expression of fng enhanced N-Dl binding; mutation of N O-fucosylation sites, T348V and S502A, together abolishes fng mediated enhancement of N-Dl binding.

External Crossreferences and Linkouts ( 1 )
Linkouts
MIST - An integrated Molecular Interaction Database
References (12)