FB2026_03 , released September 17, 2026
Transcript: Dmel\Cnot4-RD
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General Information
Symbol
Dmel\Cnot4-RD
Species
D. melanogaster
Annotation Symbol
CG31716-RD
FlyBase ID
FBtr0080011
Feature type
mRNA
Associated gene
Dmel\Cnot4
Evidence Rank
Length (nt)
3482
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 48 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        Contained within the annotated transcript, internally consistent
        End(s) extend beyond the annotated transcript, internally consistent
          Sequence
          Sequence Downloader
          CGATAGTTTGAGCTGTGGAAAAAAATCGAATGTTTCTTGTGGAAAAAATTGGAGTCTTTAATTTGGCGAATCCATTCGTT
TACTTTGCGTTTATTTTTAGCCTTAGTACTTTCGTTTGATACGTTTGCTACCAACTTGGTTCTCATCATTATCAACAATT
TTATAAAAATTACAACTGCGAGTACTTCATCACTAATCAACAAATCACCTGAAAATGAACGGCCTGAGCAGCAATGATGA
TGCAGTCGAGTGCCCTTTGTGTATGGAGCCGCTTGAGGTGGACGATCTGACCTTCTTTCCGTGTACCTGCGGATATCAGA
TTTGCCGATTCTGTTGGCATAGGATCCGCACGGATGAGAACAAGCTGTGTCCGGCATGCCGAAAGGAGTATCCCGAGAAT
CCAGCTGACTTCAAGCCGCTGTCGCAGGAGGAAATGATTGCCTTCAAGTCCCAGAAACGCCAAAGGGACCAACAACGAAA
ACAAAAGATCACCGAGAACCGCAAACACTTGGCCAACGTTCGCGTTGTCCAAAAGAACTTGGTGTTCGTTGTGGGGCTAC
CGCCACGACTTGCTGATGCAGACATATTAAAGAAACACGAGTATTTCGGTAAATATGGGAAAATTCATAAAGTCGTTATA
AATCCAAGTACCACGTATGCCGGGGTCCAGGGTCCATCTGCTTCTGCGTATGTCACATATGTTAATAACTCGGATGCCTT
GCGGGCCATTCAAAGCGTCAATAATATTATGATAGACGGTCGGCTTATAAAGACCAGCTTGGGGACAACCAAATACTGTA
GCCACTTCATGAAGAACCAGCAGTGTCCCAAGGGCGACTGCATGTACTTACATGAATTGGGCGATCCCGAGGCCAGTTTC
ACAAAGGAGGAAATGCATCAGGGAAAGCACCTGGAGTACGAGAAGCGCCTGCACGATACTCTAATTGCGTCATTGGGACC
GAATGCAACAGGTATTGTAAATGTCGCGATTCCATCGTCATCGTCAGCGTCATCCTCGTCCTCTGGATCGGGTACAAATG
GTTCAAGTGCATCAGGTAATGCCCAGCAAAAGGAGGCCTGGCCAAGCTTATCGGTCTCGCCCATCAATGGCAAAGAGGCG
GCTGCCACTGCGACCAGTTCCAGTGGGAAAAGTAAACGGGAAAAGCTGCGCAACGAGAAGAGGCACGAGAAGAACAAGGC
GAAGAATAAGAACGGCAGCAATACAAACGCCAATGCCTCGAACAAGGAGAACTATGTTCCCGAAACGAGAAGCAGCACAA
GTACTGAGACATTCGCAGAGGCTACGGCGGATGCACCGGCTTCCACCAAGGCAGAACCGCCGCAAGCCTCTAGCAATAGA
ACGAGGGCGGATCGTGGAAAAGATCGGACCACGGCTAGTGCAAAGGAGCAGAAGAAGAGCAAGGAAGCTGCTCCAGCACC
TGCAGCAAGTAAACCGGCGGAGCGGGTTGAAACAAGCGAGAGTACAATAAGACAAAAGAAGGCGGAAGTAACAGAAAGCT
GTGAAGATAACTTACCACAAAAGAGATTAGCGGGAACAAACGTTCAAAGATCTGTGAGCTCTTGTAGCGAAAATAGCGAA
GGACACGTCTCTGAGAGTAGCTTAAGTGAGAAGAGTTTAACTGGTGATTATGTGGAGGAAAAGTGCAATAGTGTGAATTC
GGAAAGCCAGCAAGAAAGTGTAAAGTTTCAGGAGGAGCTCGAAAAGAGCAACGAGGCAATTGTCGAGGCCGAAACGATTC
TGCCAACAGCTGAGTCCTCTGAGGACATCAGTCCCGCTGCAGTTGCGCCAGGCAATGGAGAAGTCGAAGGATGCTTACCC
GTTGTTGATCCAGTCGAACCACCGAGTCTGGCGGATAATGGAAGCAGAGTAACAGATGCGCTATCTAAGCTGAACATTTT
CGATGACACGCCTAGCTTTTTCACATCGCCATCATTCCAGCAAGCACCCATATTAAAGAATAAGCTAGATTTGGAAATGC
GACAGTCTCATTTACCTGACTTGGTCAACGACATTGATGGAATCCAAAAGGCATCCAATACAAACGAGTGGGAGGAAGCC
TTCAAAAATGTGATGATGGGCAACACGCAGCACATGGAGGAGCAACTGTTGCAGCAGCAACATTTGCAGCAGCATCAGAA
TTTGCGCCACCAGCTGGTGTTGCAACAGGAGGAGTTCCTTCGCATGCAAGAATTACAGAAACGCAACAACTTTGCGACGC
AAATCAACGGTCCTGCGAATGATTTCCTTAGAGCTTATGAGCTCAGAGCTCAAGCCAATGCAATCATTCAGCAACAATTA
TTACAACAGCACGCAGGCGAAAATCTATTTGGCGGCAACATGTCGAAGTTCTTCGATTTCCATAAAAGTCAGCCGCAGTC
ACACCATCAGTATCTAAATGGACATCCGCCTCAAATCAATGGGAACGGTGCTGTGCCGGAGCCGCAAAGAGTGGCGGCCT
CTTTGGAAAGCAATCGACTGAATTCGCCTTTTGTCGAAAATGGACTTATTAACTCGCAGCAGCAGCAGCAGCAGCAGCAA
CAGCAACAAAAGCAGAGAATGATGGGAATGTATGAATTTATGCCTCCAAACACGCAATCTCAGCAGAATCGGTTTACACA
GAACTCGATAGTCGACGATGACTTAGGATTCGACCCGTTCGTTGAGACCCAAAAGGGACTTGCTGAACTTATGGAAAATG
AGGTGGTCCAAAAACAGAGTATTAATAATGAGAACCCCTTGCCGAAGTTGCCGCCACAGCCTCAAGTTCCACCCCATCCG
CAATTGGTGGACAACCTGCAGCGAGCTCGCATGCCGCCGCCAGGCTTCAATCACGTCAACACATTGGGCTTGGGCGGTGC
ATCCAGACTGCAGCTCACCAGCAAAATAATACCCTTCATGAACATGCCCGTCAATGGGGTGGGCAACAGCGGTGCCCAGG
GACAGCACCAAATGCCAATGGGTGTCAACTGGAATGCGCCGATGGGCATGCACCAGAACCCGGGACAGCCCGTGGGTGAT
TCGCAATTGCAGCATCCAATGGCTCACAACAAGGTTTACAACAACAGTGATTGGACTTCAATGGATCCGGCTATACTTTC
GTTTAGACAGTATTCTTCTTTTCCACAAAACCAAATTCCCCCACATCCTCAGCAGCAACAGGATTTATTTTTGCAGCATT
TGGCTCAACAGCAAAATTCCCAGAGTGGTGGTTTCAACAACCAGGCACAGCAAATGCTTCCTATGGGGATGCCCAATAGT
TTGCTGAACGGACAACAAACGCAGCCGCCACAGGTCAATGCCAATGTTCAGGGCATGCTTGAGTTTTTAAAAAGCCGTCA
ATTCGTTTAGCTACAATACATATAAATAATACATTTGTTTACCTGTACTCTTTATTAAATATTTCTTAAAGTAAATATAG
GCAAAATAAAATTCGAATATAATGAAACTACATGATACAAAC
          Other Products of this Gene
          Other Transcripts
          Name
          FlyBase ID
          Length (nt)
          Cnot4-RA
          FBtr0080009
          3615
          Cnot4-RB
          FBtr0080013
          3644
          Cnot4-RC
          FBtr0080010
          3552
          Cnot4-RE
          FBtr0080012
          3554
          Cnot4-RG
          FBtr0080014
          3370
          Cnot4-RH
          FBtr0304112
          3963
          Cnot4-RI
          FBtr0304113
          3603
          Cnot4-RJ
          FBtr0331637
          3826
          Cnot4-RK
          FBtr0331638
          3972
          Cnot4-RL
          FBtr0331639
          3612
          Polypeptides
          Derived from THIS transcript
          Name
          FlyBase ID
          Length (aa)
          Cnot4-PD
          FBpp0079601
          1051
          Derived from OTHER transcripts
          Name
          FlyBase ID
          Length (aa)
          Cnot4-PA
          FBpp0079599
          1051
          Cnot4-PB
          FBpp0079603
          1051
          Cnot4-PC
          FBpp0079600
          1051
          Cnot4-PE
          FBpp0079602
          1051
          Cnot4-PG
          FBpp0079604
          1047
          Cnot4-PH
          FBpp0293055
          1059
          Cnot4-PI
          FBpp0293056
          1047
          Cnot4-PJ
          FBpp0304027
          1054
          Cnot4-PK
          FBpp0304028
          1062
          Cnot4-PL
          FBpp0304029
          1050
          Comments

          Only one EST supports this alternative transcript

          Transcript terminates at site supported by polyadenylated cDNA.

          External Crossreferences and Linkouts ( 1 )
          Crossreferences
          RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
          Synonyms and Secondary IDs (3)
          Reported As
          Symbol Synonym
          CG31716-RD
          (FlyBase, 1996-)
          CG5244-RD
          Cnot4-RD
          Secondary FlyBase IDs
            References (2)