FB2026_03 , released September 17, 2026
Transcript: Dmel\Cnot4-RB
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General Information
Symbol
Dmel\Cnot4-RB
Species
D. melanogaster
Annotation Symbol
CG31716-RB
FlyBase ID
FBtr0080013
Feature type
mRNA
Associated gene
Dmel\Cnot4
Evidence Rank
Length (nt)
3644
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 48 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        Contained within the annotated transcript, internally consistent
        End(s) extend beyond the annotated transcript, internally consistent
          Sequence
          Sequence Downloader
          AAACACTCGCATATGTGTGCGTATATAGTGGATTAACAAATTGCTGATGTACACATATTAAGTGCTTTTACAATGCATAC
GCAAATATCGATGCAAATTCTAGTAATTTTGCTTAATACCCACACGTATTTGCATGTCGCCATACTCACACACATGTTCG
GTTATTAAACTCTTGAAAATTGTACTTTCTTTTTGATTGTGTTTTAAAGAGAGCTTCCGTTTTAAATTTGAGAACTTATT
GATGTACGCAGGTAGTGCGTATATTTCCGAGCTGGTTTGATTTTTGTTATGAAAAGCTTGGTTCTCATCATTATCAACAA
TTTTATAAAAATTACAACTGCGAGTACTTCATCACTAATCAACAAATCACCTGAAAATGAACGGCCTGAGCAGCAATGAT
GATGCAGTCGAGTGCCCTTTGTGTATGGAGCCGCTTGAGGTGGACGATCTGACCTTCTTTCCGTGTACCTGCGGATATCA
GATTTGCCGATTCTGTTGGCATAGGATCCGCACGGATGAGAACAAGCTGTGTCCGGCATGCCGAAAGGAGTATCCCGAGA
ATCCAGCTGACTTCAAGCCGCTGTCGCAGGAGGAAATGATTGCCTTCAAGTCCCAGAAACGCCAAAGGGACCAACAACGA
AAACAAAAGATCACCGAGAACCGCAAACACTTGGCCAACGTTCGCGTTGTCCAAAAGAACTTGGTGTTCGTTGTGGGGCT
ACCGCCACGACTTGCTGATGCAGACATATTAAAGAAACACGAGTATTTCGGTAAATATGGGAAAATTCATAAAGTCGTTA
TAAATCCAAGTACCACGTATGCCGGGGTCCAGGGTCCATCTGCTTCTGCGTATGTCACATATGTTAATAACTCGGATGCC
TTGCGGGCCATTCAAAGCGTCAATAATATTATGATAGACGGTCGGCTTATAAAGACCAGCTTGGGGACAACCAAATACTG
TAGCCACTTCATGAAGAACCAGCAGTGTCCCAAGGGCGACTGCATGTACTTACATGAATTGGGCGATCCCGAGGCCAGTT
TCACAAAGGAGGAAATGCATCAGGGAAAGCACCTGGAGTACGAGAAGCGCCTGCACGATACTCTAATTGCGTCATTGGGA
CCGAATGCAACAGGTATTGTAAATGTCGCGATTCCATCGTCATCGTCAGCGTCATCCTCGTCCTCTGGATCGGGTACAAA
TGGTTCAAGTGCATCAGGTAATGCCCAGCAAAAGGAGGCCTGGCCAAGCTTATCGGTCTCGCCCATCAATGGCAAAGAGG
CGGCTGCCACTGCGACCAGTTCCAGTGGGAAAAGTAAACGGGAAAAGCTGCGCAACGAGAAGAGGCACGAGAAGAACAAG
GCGAAGAATAAGAACGGCAGCAATACAAACGCCAATGCCTCGAACAAGGAGAACTATGTTCCCGAAACGAGAAGCAGCAC
AAGTACTGAGACATTCGCAGAGGCTACGGCGGATGCACCGGCTTCCACCAAGGCAGAACCGCCGCAAGCCTCTAGCAATA
GAACGAGGGCGGATCGTGGAAAAGATCGGACCACGGCTAGTGCAAAGGAGCAGAAGAAGAGCAAGGAAGCTGCTCCAGCA
CCTGCAGCAAGTAAACCGGCGGAGCGGGTTGAAACAAGCGAGAGTACAATAAGACAAAAGAAGGCGGAAGTAACAGAAAG
CTGTGAAGATAACTTACCACAAAAGAGATTAGCGGGAACAAACGTTCAAAGATCTGTGAGCTCTTGTAGCGAAAATAGCG
AAGGACACGTCTCTGAGAGTAGCTTAAGTGAGAAGAGTTTAACTGGTGATTATGTGGAGGAAAAGTGCAATAGTGTGAAT
TCGGAAAGCCAGCAAGAAAGTGTAAAGTTTCAGGAGGAGCTCGAAAAGAGCAACGAGGCAATTGTCGAGGCCGAAACGAT
TCTGCCAACAGCTGAGTCCTCTGAGGACATCAGTCCCGCTGCAGTTGCGCCAGGCAATGGAGAAGTCGAAGGATGCTTAC
CCGTTGTTGATCCAGTCGAACCACCGAGTCTGGCGGATAATGGAAGCAGAGTAACAGATGCGCTATCTAAGCTGAACATT
TTCGATGACACGCCTAGCTTTTTCACATCGCCATCATTCCAGCAAGCACCCATATTAAAGAATAAGCTAGATTTGGAAAT
GCGACAGTCTCATTTACCTGACTTGGTCAACGACATTGATGGAATCCAAAAGGCATCCAATACAAACGAGTGGGAGGAAG
CCTTCAAAAATGTGATGATGGGCAACACGCAGCACATGGAGGAGCAACTGTTGCAGCAGCAACATTTGCAGCAGCATCAG
AATTTGCGCCACCAGCTGGTGTTGCAACAGGAGGAGTTCCTTCGCATGCAAGAATTACAGAAACGCAACAACTTTGCGAC
GCAAATCAACGGTCCTGCGAATGATTTCCTTAGAGCTTATGAGCTCAGAGCTCAAGCCAATGCAATCATTCAGCAACAAT
TATTACAACAGCACGCAGGCGAAAATCTATTTGGCGGCAACATGTCGAAGTTCTTCGATTTCCATAAAAGTCAGCCGCAG
TCACACCATCAGTATCTAAATGGACATCCGCCTCAAATCAATGGGAACGGTGCTGTGCCGGAGCCGCAAAGAGTGGCGGC
CTCTTTGGAAAGCAATCGACTGAATTCGCCTTTTGTCGAAAATGGACTTATTAACTCGCAGCAGCAGCAGCAGCAGCAGC
AACAGCAACAAAAGCAGAGAATGATGGGAATGTATGAATTTATGCCTCCAAACACGCAATCTCAGCAGAATCGGTTTACA
CAGAACTCGATAGTCGACGATGACTTAGGATTCGACCCGTTCGTTGAGACCCAAAAGGGACTTGCTGAACTTATGGAAAA
TGAGGTGGTCCAAAAACAGAGTATTAATAATGAGAACCCCTTGCCGAAGTTGCCGCCACAGCCTCAAGTTCCACCCCATC
CGCAATTGGTGGACAACCTGCAGCGAGCTCGCATGCCGCCGCCAGGCTTCAATCACGTCAACACATTGGGCTTGGGCGGT
GCATCCAGACTGCAGCTCACCAGCAAAATAATACCCTTCATGAACATGCCCGTCAATGGGGTGGGCAACAGCGGTGCCCA
GGGACAGCACCAAATGCCAATGGGTGTCAACTGGAATGCGCCGATGGGCATGCACCAGAACCCGGGACAGCCCGTGGGTG
ATTCGCAATTGCAGCATCCAATGGCTCACAACAAGGTTTACAACAACAGTGATTGGACTTCAATGGATCCGGCTATACTT
TCGTTTAGACAGTATTCTTCTTTTCCACAAAACCAAATTCCCCCACATCCTCAGCAGCAACAGGATTTATTTTTGCAGCA
TTTGGCTCAACAGCAAAATTCCCAGAGTGGTGGTTTCAACAACCAGGCACAGCAAATGCTTCCTATGGGGATGCCCAATA
GTTTGCTGAACGGACAACAAACGCAGCCGCCACAGGTCAATGCCAATGTTCAGGGCATGCTTGAGTTTTTAAAAAGCCGT
CAATTCGTTTAGCTACAATACATATAAATAATACATTTGTTTACCTGTACTCTTTATTAAATATTTCTTAAAGTAAATAT
AGGCAAAATAAAATTCGAATATAATGAAACTACATGATACAAAC
          Other Products of this Gene
          Other Transcripts
          Name
          FlyBase ID
          Length (nt)
          Cnot4-RA
          FBtr0080009
          3615
          Cnot4-RC
          FBtr0080010
          3552
          Cnot4-RD
          FBtr0080011
          3482
          Cnot4-RE
          FBtr0080012
          3554
          Cnot4-RG
          FBtr0080014
          3370
          Cnot4-RH
          FBtr0304112
          3963
          Cnot4-RI
          FBtr0304113
          3603
          Cnot4-RJ
          FBtr0331637
          3826
          Cnot4-RK
          FBtr0331638
          3972
          Cnot4-RL
          FBtr0331639
          3612
          Polypeptides
          Derived from THIS transcript
          Name
          FlyBase ID
          Length (aa)
          Cnot4-PB
          FBpp0079603
          1051
          Derived from OTHER transcripts
          Name
          FlyBase ID
          Length (aa)
          Cnot4-PA
          FBpp0079599
          1051
          Cnot4-PC
          FBpp0079600
          1051
          Cnot4-PD
          FBpp0079601
          1051
          Cnot4-PE
          FBpp0079602
          1051
          Cnot4-PG
          FBpp0079604
          1047
          Cnot4-PH
          FBpp0293055
          1059
          Cnot4-PI
          FBpp0293056
          1047
          Cnot4-PJ
          FBpp0304027
          1054
          Cnot4-PK
          FBpp0304028
          1062
          Cnot4-PL
          FBpp0304029
          1050
          Comments

          Only one EST supports this alternative transcript

          Transcript terminates at site supported by polyadenylated cDNA.

          External Crossreferences and Linkouts ( 1 )
          Crossreferences
          RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
          Synonyms and Secondary IDs (3)
          Reported As
          Symbol Synonym
          CG31716-RB
          (FlyBase, 1996-)
          CG5244-RB
          Cnot4-RB
          Secondary FlyBase IDs
            References (2)