FB2026_03 , released September 17, 2026
Transcript: Dmel\f-cup-RE
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General Information
Symbol
Dmel\f-cup-RE
Species
D. melanogaster
Annotation Symbol
CG9611-RE
FlyBase ID
FBtr0112939
Feature type
mRNA
Associated gene
Dmel\f-cup
Evidence Rank
Length (nt)
2219
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 24 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
      cDNA Clones, End Sequence Only (ESTs)
      Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
      Sequence
      Sequence Downloader
      AGCTGAGCGCCATCGGTTGTGTGACTCTACCGAAGCATCTCCCAAGATTGCGTCCTCCAGGAAACAGCTCACTTCGTTCT
GCATGTGCGGTCCTTATCCGCGGAGGCGTCGCTACTACCAGATTCGCGAATTCCAGATGGCCTCCTCGGCGGACGAGCTG
GAAAGCGAGGATCCGGACGATGAGCTGGAACTGGACGATTCCGAACCTCCAACCCGCGCTGAAGACTTGCCCAAGCGACT
GTACGACATTAACGAGGCGGATGCGGACAGCAAGGCCGTAAATCTAGAGCAGCTAACGATTAAAGAGGAGGATGCCTGGT
GGAACCAAGTGCCATTGAACAACCTGGACCTGAGCTCAAACACCTTAACGCACATATCGCCAAAGATCGAGAATCTGCAA
TCACTTACCGTGCTTACGCTGCACGATAATGCTTTGGTGGAGTTACCACCGGAGATCGGCAAGCTGGAAAAGCTAGTGCG
CCTTAATGTGAGCCACAACAAACTCAGCCAGCTGCCGCGTGCGATGTACAGTCTACCGGAGCTGCGGCACCTCAACATCT
CGTACAACGAGTTCGTCGAACTTAATCCGGACATCAGTGACCTTCACATGCTTGAGTTTTTGGACGGTGGGCATAACAAT
ATTCAATCCCTGCCCGGTGGCATTGGGTTCCTGGTGCGTCTAACTGCGCTCTTGTTGCCCTATAATCACATCAAGGAACT
GCCGCCCGATCTTGTTAACATGCGCTCTTTGCAAAAGATTGATCTGATGCATAATGATCTGACCAGCTTGCCGGAGGATA
TGGGCCTTTTGAGAAAGCTGGATTGCCTTTATCTGCAGCATAACGACATACTGGAACTGCCCGAGTTCGAGGGAAACGAG
GCCTTGAACGAGCTACATGCCAGCAATAATTTCATCAAGATCATACCAAAAGCTATGTGTAGTAACTTGCCACACCTGAA
GATACTGGATTTGCGGGACAATAAGATCACGGAGCTGCCCGACGAGCTGTGCCTGCTGCGCAATCTAAACCGTCTCGATG
TGTCCAATAATACGATCAGCGTGCTGCCAGTCACATTGTCCTCCTTGGCTCATCTGATTAGCCTGCAGGTGGAGGGAAAT
CCCATAAAGACAATCAGACGCGACATCCTACAGTGTGGAACAACGAGGATCTTAAAGACTCTGCACGATAGAGCTGTGGC
GAAGGCCAAGGAGGAGGGAGGTGGCGTCGACGACGCTTCCACGTCAGCGGGCATCAGTGTTACCCGTTTGCGTGGTGGCC
AAATGGACGATGGTGATATACCCGGAAACTTTCCGGATAGATACAAACTACGACATACACGTACATTAGCTGTCAATCTG
GAGGAGCTCACGTCAGTGCCTGACCAGGTGTTCCAGATCGCCAGGGATGAGGGTGTGCATGTGGTGGACTTTGCGCGCAA
CCAGCTGAGCACTTTGCCCAATGGACTGCAGCACATGAAAGATTTAGTTACGGAACTAGTTTTATCCAACAATGTCATCG
GCTATGTGCCACAGTTCATCTCCCAGTTTACACGTATATCTTTCTTGAATTTGTCCAACAATCTGTTGAATGACCTGCCC
ACGGAGTTTGGTGTCTTGAATACACTGCGTGAACTAAACATTGCAAACAATCGCTTTCCGTGTATTCCCAACTGTGTGTA
CGAGCTGCAAGGCCTGGAGATCCTCATTGCCAGTGAGAACCACATAAAAATGTTAAATGTATCGGGTCTGCAGAACATGC
GACGTTTGAGCACATTGGATTTGCGCAATAACGACATCGAGACAGTGCCACCAATTTTGGGGAACCTGACAAACATAACT
CACTTGGAGCTGGTGGGCAATCCATTTCGACAGCCCCGCCACCAAATCCTGATGAAGGGCACTGACGCCATCATGTCGTA
TTTGCGCGATCGCATACCCACATAGAAGAGCAATTCACACCGTTTTTTGAGAAACACTTCACTAGCAATATGTTTATTTT
GAGGAATAGCGTAATGGAAATTGATAGATCCGCTCGACCATGCCCACAAACAATCAATCTATGGATTGGCTGTTTGTGGA
CATGGATGAGGGGTGGCGTTACAAGTACAACATACGACACACACCGTGCATCAACCAACCAAACTAGTCTGCATGCCACA
ATACCTAATGCACGTTGTTAATCCTGGCTGAGTATCTGCAATAAATGGGAATAGTAGGG
      Other Products of this Gene
      Other Transcripts
      Name
      FlyBase ID
      Length (nt)
      f-cup-RA
      FBtr0082846
      2558
      f-cup-RB
      FBtr0082847
      2470
      f-cup-RC
      FBtr0112937
      3407
      f-cup-RD
      FBtr0112938
      2532
      f-cup-RF
      FBtr0334526
      2885
      f-cup-RG
      FBtr0334527
      2797
      f-cup-RH
      FBtr0334528
      2795
      f-cup-RI
      FBtr0334529
      3319
      Polypeptides
      Derived from THIS transcript
      Name
      FlyBase ID
      Length (aa)
      f-cup-PE
      FBpp0111852
      620
      Derived from OTHER transcripts
      Name
      FlyBase ID
      Length (aa)
      f-cup-PA
      FBpp0082311
      693
      f-cup-PB
      FBpp0082312
      650
      f-cup-PC
      FBpp0111850
      522
      f-cup-PD
      FBpp0111851
      474
      f-cup-PF
      FBpp0306593
      802
      f-cup-PG
      FBpp0306594
      759
      f-cup-PH
      FBpp0306595
      571
      f-cup-PI
      FBpp0306596
      522
      Comments

      Transcript terminates at site supported by polyadenylated cDNA.

      External Crossreferences and Linkouts ( 1 )
      Crossreferences
      RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
      Synonyms and Secondary IDs (2)
      Reported As
      Symbol Synonym
      CG9611-RE
      f-cup-RE
      Secondary FlyBase IDs
        References (0)