A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Dmel\P{EPgy2}ArfipEY11874 Insertion

General Information
Symbol Dmel\P{EPgy2}ArfipEY11874 Species D. melanogaster
Name FlyBase ID FBti0057674
Feature type transposable_element_insertion_site
Description
Inserted element P{EPgy2} Expression data
Affected gene(s) Arfip Viability / fertility fertile, viable
Causes allele(s) ArfipEY11874 Stock availability 1 publicly available
LINE ID EY11874
Genomic Location
Chromosomal location 3R ( 86D8 ) Sequence location 3R:7,060,890..7,060,890 [-]
Map ( GBrowse ) GBrowse View Help detailed view FBti0060913 FBti0128443 FBti0130185 FBti0042237 FBti0126035 FBti0128315 FBti0055469 FBti0042809 FBti0029220 FBti0057674 FBti0128408 FBti0130153 FBti0126036 FBti0042503 FBti0041346 FBti0050032 FBti0030233 FBti0045811 FBti0104306 FBti0102690 FBti0055818 FBti0059017 FBti0103528 FBti0059569 FBti0023571 FBti0039868 FBti0107892 FBti0072767 FBti0113293 FBti0102759 FBti0030091 FBti0013611
Member of Large Scale Dataset(s)
Dataset

A set of transgenic insertion stocks derived by TE mobilization using the P-element construct P{EPgy2}; created and vetted by the Gene Disruption Project (GDP). The P{EPgy2} construct carries two visible markers, the mini-white marker w[+mC] and the mini-yellow marker y[+mDint2], and Scer\UAS binding sites for the Scer\GAL4 transcriptional regulator. The GAL4-UAS system allows regulated expression of genes proximate to the site of the insertion: genes properly oriented with respect to the Scer\UAS sequences can be conditionally expressed via transgene-derived Scer\GAL4 activity.
Additional P{EPgy2} insertion lines were generated, mapped, and assessed for inclusion in the Gene Disruption Project collection; flanking sequence data were submitted to GenBank.
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Description
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FB2013_03
FB2013_02
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hide Detailed Mapping Data
Chromosome (arm)
Sequence Location
3R:7,060,890..7,060,890 [-]
Orientation
Cytological location
(computed by FlyBase)
86D8 ( inferred by FlyBase from sequence location )
Cytological location
(reported)
86D10 (reported as inferred from sequence location)
Comments concerning
location
hide Sequence Data
Flanking sequence
hide Inserted Element
Construct P{EPgy2}
Location-dependent
role
mobile activating element (UASG)
Size 10.908Kb
Associated alleles
Molecular map
hide Affected Gene(s)
Insertion may
affect gene
hide Alleles and Phenotypes
Causes alleles
Lethality
References
Sterility
References
hide Phenotype Manifest In
hide Detailed Description
Statement
Reference
Expression of CG17184[EY11874] under the control of Scer\GAL4[GMR.PF] has no effect on the reduced red eye pigment phenotype of blos1[ex2] flies.
Primary cultured haemocytes from homozygous larvae internalise maleylated bovine serum albumin (mBSA) normally.
hide Expression Data
Reporter Expression
Additional Information
Statement
Reference
Marker for
Reflects
expression of
Reporter construct
used in assay
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FlyView (LinkOut)
hide Data on Genetic Line
Line ID
Origin as a multiple insertion line
hide Progenitor(s) within the Genome
hide Related Aberration or Balancer
Aberration
Balancer
hide Stocks ( 1 )
Bloomington
hide Linkouts
hide Comments
Location 3R:7060890-7060891 confirmed by FlyBase alignment of dbGSS accession CL868525 to D. melanogaster arm Release_4 and heterochromatin Release_3.2b. Insertion orientation confirmed.
hide Synonyms & Secondary IDs
Reported As
Symbol Synonym
P{EPgy2}ArfipEY11874
 
P{EPgy2}CG17184EY11874
P{EPgy2}EY11874
P{Epgy2}EY11874
Secondary FlyBase IDs
hide References ( 8 )
Research paper
Bellen et al., 2011, Genetics 188(3): 731--743
The Drosophila gene disruption project: progress using transposons with distinctive site specificities. [FBrf0214229]
Cheli et al., 2010, Hum. Mol. Genet. 19(5): 861--878
Genetic modifiers of abnormal organelle biogenesis in a Drosophila model of BLOC-1 deficiency. [FBrf0209903]
Korolchuk et al., 2007, J. Cell Sci. 120(24): 4367--4376
Drosophila Vps35 function is necessary for normal endocytic trafficking and actin cytoskeleton organisation. [FBrf0202367]
Bellen et al., 2004, Genetics 167(2): 761--781
The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. [FBrf0179132]
Personal communication to FlyBase
Gene Disruption Project members, 2001-, (Computer file)
(Computer file) [FBrf0132177]
FlyBase analysis
FlyBase Curators, 2013, Members of GDP insertion collections: P{GT1}, P{SUPor-P}, P{EPgy2}, Mi{ET1}, Mi{MIC}.
Members of GDP insertion collections: P{GT1}, P{SUPor-P}, P{EPgy2}, Mi{ET1}, Mi{MIC}. [FBrf0220667]
FlyBase, 2005, Assessment of transgenic construct insertion sites.
Assessment of transgenic construct insertion sites. [FBrf0184339]
FlyBase, 1992-, FlyBase curation.
FlyBase curation. [FBrf0105495]