FB2020_06, released Dec 22, 2020

Aberration: Dmel\Df(3R)ED6265

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General Information
Symbol
Df(3R)ED6265
Species
D. melanogaster
Name
FlyBase ID
FBab0037485
Feature type
chromosomal_deletion
Computed Breakpoints include

[97E2-97E2];[98A7-98A7];

Features within 97E2--98A7
Genomic Maps
Sequence coordinates
3R:27,112,259..27,112,259 (Df(3R)ED6265:bk1)
(DrosDel Project, 2007.6.25)
3R:27,579,770..27,579,770 (Df(3R)ED6265:bk2)
(DrosDel Project, 2007.6.25)
Member of large scale dataset(s)
Dfs_DrosDel_set1

A set of isogenic deficiency stocks created by FLP-induced recombination between FRT-carrying transgenic insertions; molecularly defined deletion endpoints correspond to initial location of the progenitor insertions. Initial core set of 209 isogenic deletions provides ~60% euchromatic genome coverage.

(Ryder et al., 2007)
Nature of Aberration
Cytological Order
Progenitor
P{RS3r}CB-0823-3
(Ryder and Roote, 2005.11.4)
P{RS5r}5-HA-1887
(Ryder and Roote, 2005.11.4)
Mutagen
FLPase
(Ryder and Roote, 2005.11.4)
Class of aberration (relative to wild type)
chromosomal_deletion
(FlyBase, 2007)
Class of aberration (relative to progenitor)
chromosomal_deletion
(Ryder and Roote, 2005.11.4, Ryder, 2003.6.17)
Breakpoints

97E2;98A7

(FlyBase Curators, 2008)
Causes alleles
Carries alleles
Transposon Insertions
P{3'.RS5+3.3'}ED6265
(Ryder and Roote, 2005.11.4)
Formalized genetic data
Genetic mapping information
Comments
Comments on Cytology

Confirmed by 3-step PCR confirmation as shown in http://www.drosdel.org.uk/del_confirm.php

(Ryder and Roote, 2005.11.4)

Limits computationally determined from location of progenitor P insertion on genome sequence between P{PZ}sda03884 and P{PZ}btzrL203

Sequence Crossreferences
DDBJ / EMBL / GenBank
DNA sequence
Protein sequence
Gene Deletion and Duplication Data
Genes Deleted / Disrupted
Complementation Data
Completely deleted / disrupted
l(3)mbt
(Ambrus et al., 2009)
Partially deleted / disrupted
Molecular Data
Completely deleted
Partially deleted
Genes NOT Deleted / Disrupted
Complementation Data
 
Molecular Data
 
Genes Duplicated
Complementation Data
Completely duplicated
Partially duplicated
Molecular Data
Completely duplicated
Partially duplicated
Genes NOT Duplicated
Complementation Data
 
Molecular Data
 
Affected Genes Inferred by Location
Phenotypic Data
In combination with other aberrations

Inferred to overlap with: Df(3R)BSC686.

(Cook et al., 2008.12.28)
NOT in combination with other aberrations
Stocks (2)
Notes on Origin
Discoverer
 

Potential deficiency; could be generated as the recombinant product between the reduced derivatives of P{RS3}CB-0823-3 and P{RS5}5-HA-1887.

(Ryder, 2003.6.17)
Balancer / Genotype Variants of the Aberration
 
Separable Components
 
Other Comments
 
Synonyms and Secondary IDs (3)
References (13)