FlyBase Allele Report: Dmel\scny[e00340]

General Information

Symbol

Dmel\scny^e00340

Species

D. melanogaster

Name

FlyBase ID

FBal0178775

Feature type

allele

Associated gene

Dmel\scny

Associated Insertion(s)

PBac{RB}scny^e00340

Carried in Construct

Key Links

Genomic Maps

JBrowse

Allele class

Mutagen

piggyBac activity

Nature of the Allele

Allele class

Mutagen

piggyBac activity

(Gene Disruption Project members and Exelixis, 2005)

Progenitor genotype

Associated Insertion(s)

PBac{RB}scny^e00340

Cytology

Description

Allele components

Component

Use(s)

Inserted element

PBac{RB}

gene trap

Also carries

FRT

recombinase target site

Mutations Mapped to the Genome

Curation Data

Type

Location

Additional Notes

References

transposable_element_insertion_site

3L:5,769,265..5,769,266 [-]

(Ribaya et al., 2009, Gene Disruption Project members and Exelixis, 2005)

Variant Molecular Consequences

Associated Sequence Data

DDBJ / EMBL / GenBank

DNA sequence

Protein sequence

UniProtKB/Swiss-Prot

UniProtKB/TrEMBL

Expression Data

Reporter Expression

Additional Information

Statement

Reference

Marker for

Reflects expression of

Reporter construct used in assay

Human Disease Associations

Disease Ontology (DO) Annotations

Models Based on Experimental Evidence ( 0 )

Disease

Evidence

References

Modifiers Based on Experimental Evidence ( 0 )

Disease

Interaction

References

Comments on Models/Modifiers Based on Experimental Evidence ( 0 )

Disease-implicated variant(s)

Phenotypic Data

Phenotypic Class

female sterile (with scny^roo)

(Ribaya et al., 2009)

lethal (with Df(3L)ZN47)

(Buszczak et al., 2009)

lethal (with scny⁰²³³¹)

(Buszczak et al., 2009)

lethal | recessive

(Buszczak et al., 2009, Ribaya et al., 2009)

male sterile (with scny^roo)

(Ribaya et al., 2009)

viable (with scny^d06513)

(Buszczak et al., 2009)

viable (with scny^f01742)

(Buszczak et al., 2009)

Phenotype Manifest In

female germline stem cell | somatic clone

(Buszczak et al., 2009)

Detailed Description

Statement

Reference

The half life of female germline stem cells in Usp36^e00340 somatic clones is sharply reduced compared to wild-type.

(Buszczak et al., 2009)

External Data

Linkouts

Interactions

Show genetic interaction network for Enhancers & Suppressors

Phenotypic Class

Phenotype Manifest In

Additional Comments

Genetic Interactions

Statement

Reference

Xenogenetic Interactions

Statement

Reference

Complementation and Rescue Data

Fails to complement

scny^GS13655

(Ribaya et al., 2009)

scny^EY08858

(Ribaya et al., 2009)

scny⁰²³³¹

(Ribaya et al., 2009)

Comments

Images (0)

Mutant

Wild-type

Stocks (1)

Bloomington

85523

w¹¹¹⁸; PBac{RB}scny^e00340/TM6B, Tb¹

Notes on Origin

Discoverer

External Crossreferences and Linkouts ( 0 )

Synonyms and Secondary IDs (4)

Reported As

Symbol Synonym

Usp36^e00340

et^e00340

(Ribaya et al., 2009)

mule^e00340

scny^e00340

(Morillo Prado et al., 2013, Buszczak et al., 2009, Buszczak et al., 2009)

Name Synonyms

Secondary FlyBase IDs

References (5)

Report Sections

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