FlyBase Allele Report: Dmel\lncRNA:CR40469[KO]

General Information

Symbol

Dmel\lncRNA:CR40469^KO

Species

D. melanogaster

Name

FlyBase ID

FBal0405203

Feature type

allele

Associated gene

Dmel\lncRNA:CR40469

Associated Insertion(s)

TI{TI}lncRNA:CR40469^KO

Carried in Construct

Key Links

Genomic Maps

JBrowse

Allele class

loss of function allele

Mutagen

ends-out gene targeting

Nature of the Allele

Allele class

loss of function allele

(Camilleri-Robles et al., 2024)

Mutagen

ends-out gene targeting

(Camilleri-Robles et al., 2024)

Progenitor genotype

Associated Insertion(s)

TI{TI}lncRNA:CR40469^KO

Cytology

Description

1089bp including lncRNA:CR40469 is replaced by an mCherry cassette.

(Camilleri-Robles et al., 2024)

Allele components

Component

Use(s)

Tagged with

mCherry

red fluorescent protein

Mutations Mapped to the Genome

Curation Data

Type

Location

Additional Notes

References

delins

X:121,830..122,918 [+]

Comment:

1089bp deletion that removes lncRNA:CR40469 and replaces it with an mCherry cassette.

(Camilleri-Robles et al., 2024)

Variant Molecular Consequences

Associated Sequence Data

DDBJ / EMBL / GenBank

DNA sequence

Protein sequence

UniProtKB/Swiss-Prot

UniProtKB/TrEMBL

Expression Data

Reporter Expression

Additional Information

Statement

Reference

Marker for

Reflects expression of

Reporter construct used in assay

Human Disease Associations

Disease Ontology (DO) Annotations

Models Based on Experimental Evidence ( 0 )

Disease

Evidence

References

Modifiers Based on Experimental Evidence ( 0 )

Disease

Interaction

References

Comments on Models/Modifiers Based on Experimental Evidence ( 0 )

Disease-implicated variant(s)

Phenotypic Data

Phenotypic Class

decreased size | adult stage, with Ecol\lexA^GAD.salm.EPv, rpr^lexAop.cSa

(Camilleri-Robles et al., 2024)

viable

(Camilleri-Robles et al., 2024)

visible | adult stage, with Ecol\lexA^GAD.salm.EPv, rpr^lexAop.cSa

(Camilleri-Robles et al., 2024)

Phenotype Manifest In

wing, with Ecol\lexA^GAD.salm.EPv, rpr^lexAop.cSa

(Camilleri-Robles et al., 2024)

Detailed Description

Statement

Reference

External Data

Linkouts

Interactions

Show genetic interaction network for Enhancers & Suppressors

Phenotypic Class

Suppressed by

Statement

Reference

Ecol\lexA^GAD.salm.EPv, lncRNA:CR40469^KO, rpr^lexAop.cSa has visible | adult stage phenotype, suppressible | partially by Scer\GAL4^nub.PK/lncRNA:CR34335^UAS.cCa

(Camilleri-Robles et al., 2024)

NOT suppressed by

Statement

Reference

Ecol\lexA^GAD.salm.EPv, lncRNA:CR40469^KO, rpr^lexAop.cSa has decreased size | adult stage phenotype, non-suppressible by Scer\GAL4^nub.PK/lncRNA:CR34335^UAS.cCa

(Camilleri-Robles et al., 2024)

Phenotype Manifest In

Suppressed by

Statement

Reference

Ecol\lexA^GAD.salm.EPv, lncRNA:CR40469^KO, rpr^lexAop.cSa has wing phenotype, suppressible | partially by Scer\GAL4^nub.PK/lncRNA:CR34335^UAS.cCa

(Camilleri-Robles et al., 2024)

Additional Comments

Genetic Interactions

Statement

Reference

Xenogenetic Interactions

Statement

Reference

Complementation and Rescue Data

Partially rescued by

lncRNA:CR40469^KO is partially rescued by Scer\GAL4^nub.PK/lncRNA:CR40469^UAS.cCa

(Camilleri-Robles et al., 2024)

Comments

Images (0)

Mutant

Wild-type

Stocks (0)

Notes on Origin

Discoverer

External Crossreferences and Linkouts ( 0 )

Synonyms and Secondary IDs (1)

Reported As

Symbol Synonym

lncRNA:CR40469^KO

Name Synonyms

Secondary FlyBase IDs

References (1)

Report Sections

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