FB2026_03 , released September 17, 2026
Physical Interaction report
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General Information
Interaction Type
Interacting Genes
FlyBase ID
FBig0000099514
Interaction Network
Interactions Browser links
pho network
Sfmbt network
Reported Interactions
FBrf0190547-10.coIP.WB
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
pho 

Pho

bait

TAP tag

dSfmbt

prey
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

pho coimmunoprecipitated Ino80, Sfmbt, rept and pont, but not the polycomb group proteins (E(z), Pc, Su(z)12, Scm) or the nucleosome remodeling factor dom.

Gradient sedimentation of nuclear extracts indicates that Sfmbt and Ino80 exist in distinct pho-containing complexes.

Source was embryonic nuclear extract of transgenic fly line; bait produced from tagged transgenic construct; prey produced from endogenous gene.

FBrf0190547-13.coIP.WB
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note

dSfbmt

bait
pho 

Pho

prey
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Sfbmt coimmunoprecipitates pho and phol, but not Ino80 or other polycomb group proteins (Ph, Pc, Scm or Su(z)12). Sfbmt and pho are part of the Pho-repressive complex (PhoRC).

Source was embryonic nuclear extract of wild-type fly line; bait produced from endogenous gene; prey produced from endogenous gene.

FBrf0190547-15.coIP.MW
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
pho 

Pho

bait

FLAG tag

dSfbmt

prey
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was cell extract of baculovirus-infected Sf9 cell line; bait produced from transfected construct; prey produced from transfected construct.

In this assay, pho and Sfmbt form a stable complex with each other, but not with other proteins identified by mass spectrometry with TAP-tagged pho : rept or pont.

FBrf0190547-2.coIP.MS
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
pho 

Pho

bait

TAP tag

dSfmbt

prey

10 unique peptides identified

Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was embryonic nuclear extract of transgenic fly line; bait produced from tagged transgenic construct; prey produced from endogenous gene.

FBrf0213360-27.coIP.WB
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
pho 

Pho

bait

dSfmbt

prey
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was embryos of wild-type fly line; bait produced from endogenous gene; prey produced from endogenous gene.

FBrf0223175-1.PD.MW
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
pho 

Pho

bait

GST tag

pho 

Sfmbt

prey
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
pho 
spacer domain
sufficient binding region
aa 145-172
4MBT domain
sufficient binding region
aa 531-980
Pho spacer binding surface
mutation disrupting interaction
aa 635aa 638

G635K, coordinates relative to Sfmbt-PB

A638E, coordinates relative to Sfmbt-PB

Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Interaction in vitro; bait produced as a recombinant fusion protein in bacterial system; prey produced as a recombinant fusion protein in bacterial system.

pho interacts with Sfmbt, but not other MBT domain-containing proteins l(3)mbt or Scm.

FBrf0223175-2.CH.MW
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
pho 

Pho

neutral component
pho 

Pho

neutral component
pho 
pho 

Pho

neutral component
pho 

Sfmbt

neutral component

Sfmbt

neutral component

Sfmbt

neutral component
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
pho 
spacer domain
sufficient binding region
aa 145-172
4MBT domain
sufficient binding region
aa 531-980
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Interaction in vitro; proteins produced as a recombinant fusion protein in bacterial system.

A D917E mutation in Sfmbt does not affect binding to pho.

FBrf0223175-3.ITC
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
pho 

Pho

bait
pho 

Sfmbt

prey
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
pho 
spacer domain
sufficient binding region
aa 145-172
4MBT domain
sufficient binding region
aa 531-980
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Interaction in vitro; bait peptide synthesized in vitro; prey produced as a recombinant fusion protein in bacterial system.

pho and Sfmbt bind with nanomolar affinity, Kd = 18 nM.

FBrf0223175-4.XC
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
pho 

Pho

neutral component
pho 

Pho

neutral component
pho 
pho 

Pho

neutral component
pho 

Sfmbt

neutral component

Sfmbt

neutral component

Sfmbt

neutral component
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
pho 
spacer domain
sufficient binding region
aa 151-169
Pho spacer binding surface
sufficient binding region
aa 630-675
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Interaction in vitro; proteins produced as a recombinant fusion protein in bacterial system.

FBrf0223175-6.SPR
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
pho 

Pho

bait

biotin label

pho 

Sfmbt

prey
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
pho 
spacer domain
sufficient binding region
aa 145-172
4MBT domain
sufficient binding region
aa 531-980
Pho spacer binding surface
mutation disrupting interaction
aa 635aa 638

G635K, coordinates relative to Sfmbt-PB

A638E, coordinates relative to Sfmbt-PB

Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Interaction in vitro; bait peptide synthesized in vitro; prey produced as a recombinant fusion protein in bacterial system.

pho and Sfmbt bind with nanomolar affinity, Kd = 18 nM.

FBrf0223175-7.coIP.WB
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
pho 

Pho

bait

FLAG tag

Sfmbt

prey
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Pho spacer binding surface
mutation disrupting interaction
aa 635-638

G635K, A638E, coordinates relative to Sfmbt-PB

Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was cell extract of baculovirus-infected insect cell line; bait produced from transfected construct; prey produced from transfected construct.

FBrf0223175-8.coIP.WB
Description
physical association
Collection
Cell line used
Participants
Corresponds to
Reported as
Role
Note

Sfmbt

bait

TAP tag

pho 

Pho

prey
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Pho spacer binding surface
mutation decreasing interaction
aa 635-638

G635K, A638E, coordinates relative to Sfmbt-PB

MBT1 domain
mutation decreasing interaction

\'ΔMBT1\'

Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was embryos of transgenic fly line; bait produced from tagged transgenic construct; prey produced from endogenous gene.

Sfmbt coimmunoprecipitates pho but not another polycomb group protein, E(z).

FBrf0223175-9.coIP.MS
Description
physical association
Collection
Cell line used
Participants
Corresponds to
Reported as
Role
Note

Sfmbt

bait

TAP tag

pho 

Pho

prey

13 unique peptides identified

Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Sfmbt coimmunoprecipitates pho, Rpd3, HP1b, Nap1 and ocm in three independent purifications: the PhoRC-L complex.

Source was embryonic nuclear extract of transgenic fly line; bait produced from tagged transgenic construct; prey produced from endogenous gene.

FBrf0237429-1.coIP.WB
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note

dSfmbt

bait

FLAG tag

pho 

Pho

prey

HA tag

pho 
pho 
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
pho 
REPO domain
necessary binding region
aa 148-169
pho 
REPO domain
mutation disrupting interaction
aa 164

V164D

Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was cell extract of S2 cell line; bait produced from transfected construct; prey produced from transfected construct.

The Sfmbt-pho interaction decreases upon heat shock.

FBrf02585471-10.PD.MW
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note

Sfmbt

bait

FLAG tag

pho 

Pho

prey
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

The PhoRC complex consists of Sfmbt and pho.

Interaction in vitro; bait and prey produced recombinant fusion proteins in baculovirus and insect cell system.

External Crossreferences and Linkouts ( 1 )
Linkouts
MIST - An integrated Molecular Interaction Database
References (5)