FB2026_02 , released June 18, 2026
Physical Interaction report
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General Information
Interaction Type
Interacting Genes
FlyBase ID
FBig0000102443
Interaction Network
Interactions Browser links
sqd network
Hrb27C network
Reported Interactions
FBrf0056440-3.coIP.MW.A
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
sqd 

hrp40

bait

[35]S label

hrp48

prey

[35]S label

Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was cell extract of S2 cell line; bait produced from endogenous gene; prey produced from endogenous gene.

This interaction is RNA-dependent (disrupted by treatment with micrococcal nuclease).

Proteins were labeled with [35]S and immunoprecipitated using the 8G6 monoclonal antibody.

FBrf0059060-6.coIP.MW
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
sqd 

hrp40

bait

hrp48

prey
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Bound proteins separated by two dimensional electrophoresis and detected by silver staining.

Source was cell extract of S2 cell line; bait produced from endogenous gene; prey produced from endogenous gene.

FBrf0174571-1.Y2H
Description
physical association
Assay
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
sqd 

Sqd

bait

fused to LexA DNA-binding domain

sqd 
sqd 

Hrb27C

prey

fused to GAL4 activation domain

Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
sqd 
C-terminal region
sufficient binding region
aa 214-321

spans M9-like nuclear transport motif and glycine rich region

interaction domain
sufficient binding region
aa 110-422
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was yeast cell line; bait produced as transgenic fusion protein; prey produced as transgenic fusion protein (prey from ovary cDNA expression library).

Two-hybrid system: yeast LexA-BD/GAL4-AD

Four of 183 positive clones interacting with sqd bait corresponded to Hrb27C clones.

FBrf0174571-2.coIP.WB
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
sqd 

Sqd

bait

Hrb27C

prey
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was adult female ovaries of wild-type fly line; bait produced from endogenous gene; prey produced from endogenous gene.

Hrb27C specifically coimmunoprecipitates with sqd (but not spn-F) in an RNA-dependent way (interaction disrupted by RNaseA).

FBrf0203066-4.coIP.MS
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
sqd 

Sqd

bait

Hrb27C

prey
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was adult female ovaries of wild-type fly line; bait produced from endogenous gene; prey produced from endogenous gene.

Copurified proteins were identified only in sqd immunoprecipitation, and not in the negative control (dl immunoprecipitation).

External Crossreferences and Linkouts ( 1 )
Linkouts
MIST - An integrated Molecular Interaction Database
References (4)