Category 5: genes that have a jam page but it doesn't give a CG, and for which I can't find a replacement in the final xml Sima analyzed by taking fasta of protein from aa_embl.dros and BLASTing at BDGP against aa_gadfly.dros. Those that did not match, I tried the nucleic acid sequence from na_embl.dros against na_gadfly.dros and then against genomic scaffolds at NCBI. > BcDNA:LD22218 (4601bp) emb|AF132192|AF132192 BcDNA:LD22218 FBgn0027510 AF132192:117..4367 =no gene in GadFly, but matches Celera AE003809 63060-63161, 63247-65728, 65786-66076, 66164-67544 (no gene annotated at these coordinates) CT21748 no CG >bl(490aa) emb|AF142631|AF142631 bancal FBgn0015907 AF142631:220..1692 =CG13425|FBan0013425|CT40495|FBan0013425 last_updated:000321 (499aa) CT32782 with no CG >Eip63F-1(582bp) emb|U25882|DM25882_2 Eip63F-1 FBgn0004910 SWISS- PROT:P48593 U25882:359..940 =CG15855|FBan0015855|CT40256|FBan0015855 last_updated:000321 (222bp) matches Celera AE003479 246905-246870, 244623-244581, 244479-244436, 233654-233506, 227596-227440, 227366-227214, 225503-225480 CT36601 with no CG >Gprk2(714aa) emb|AF004674|DMAF4674_2 Gprk2 FBgn0004834 AF004674:1119..326 =CG17998|FBan0017998|CT40234|FBan0017998 last_updated:000321 (714aa) CT4320 with no CG >Klp54D(133aa) emb|M74427|DMKINA Klp54D FBgn0004377 SPTREMBL:Q00082 M74427:1..399 =CG15844|FBan0015844|CT40108|FBan0015844 last_updated:000321 (844aa) CT15768 no CG >lt(841aa) emb|AF034571|AF034571 lt FBgn0002566 AF034571:83..2608 =CG18028|FBan0018028|CT40348|FBan0018028 last_updated:000321 (841aa) CT38727 with no CG >LysA(140aa, 423nts) emb|Z22223|DMLYSPREA_2 LysA FBgn0011201 SWISS- PROT:P37157 Z22223:2..424 =CG9118|FBan0009118|CT9902|FBan0009118 last_updated:000321 (423nt)(406/409nt ids) CT9339 with no CG [note that very similar gene is >LysE emb|AC005847|FBpp0000780 LysE FBgn0004428 FLYBASE:FBpp0000780 AC005847:4355..4777 =CG1179|FBan0001179|CT2078|FBan0001179 last_updated:000321 (452nt)(406/423nt ids) (confirmed with CLUSTALW comparing all Lys gene nt sequences)] >M(2)21AB(405aa) emb|X77392|DMSAMS_2 M(2)21AB FBgn0005278 SWISS- PROT:P40320 X77392:232..1449 =CG2674|FBan0002674|CT31899|FBan0002674 last_updated:000321 (408aa) =CG2674|FBan0002674|CT31907|FBan0002674 last_updated:000321 (408aa) CT9065 with no CG >mys(846aa) emb|J03251|DMMYSP_3 mys FBgn0004657 SWISS- PROT:P11584 J03251:140..2680 =CG1560|FBan0001560|CT40473|FBan0001560 last_updated:000321 (845aa) CT4046 with no CG >noe(74aa) emb|AF077736|AF077736 noe FBgn0026197 AF077736:269..493 =no gene in GadFly, but matches Celera AE003524 93261-93387, but no gene annotated at these coordinates (in intron of blot gene) CT40002 no CG >Rya-r44F(5141aa) emb|D17389|DMRYRH_2 Rya-r44F FBgn0011286 SPTREMBL:Q24498 =CG10844|FBan0010844|CT30357|FBan0010844 last_updated:000321 (5107aa) CT25270 no CG >shi(883aa) emb|X59449|DMDDYN4_2 shi FBgn0003392 SWISS- PROT:P27619 X59449:52..2703 =CG18102|FBan0018102|CT40657|FBan0018102 last_updated:000321 (819aa) CT35729 with no CG and CT25562 with no CG