Isolation and characterization of Df(2L)BSC107
Jennifer Deal and Kevin Cook
Bloomington Stock Center
Indiana University
Df(2L)BSC107 was isolated as a FLP recombinase-induced recombination event involving P{XP}d00080 and PBac{WH}Ipk2f05607. The deletion was isolated as a chromosome lacking miniwhite markers in progeny of P{hsFLP}1, y1 w1118; P{XP}d00080/ PBac{WH}Ipk2f05607 males crossed to w1118; P{w+mC=hs-hid}2, wgSp-1/CyO females. These males were heat shocked as larvae as described in Parks et al., Nature Genetics 36: 288-292, 2004 (FBrf0175003). This cross and crosses in preceding and succeeding generations maintained the original genetic background of the Exelixis insertion stocks (Thibault et al, Nature Genetics 36: 283-287, 2004; FBrf0175002). The recombination event generated the genetic element P+PBac{XP5.WH5}BSC107 from the segment of P{XP}d00080 to the left of its FRT site and the segment of PBac{WH}Ipk2f05607 to the right of its FRT site. Its presence was verified using the PCR methods and primers described in Parks et al. Exelixis, Inc. determined the insertion site of P{XP}d00080 to be at Release 3 genomic coordinate 432761 on chromosome arm 2L and the insertion site of PBac{WH}Ipk2f05607 to be at Release 3 genomic coordinate 576298 on arm 2L. The Gene Disruption project determined the insertion site of PBac{WH}Ipk2f05607 to be at Release 3 genomic coordinate 576406 on arm 2L. The cytological breakpoints of Df(2L)BSC107 predicted from these coordinates are 21C5;21D1. It failed to complement ex1, ush2 and P{lacW}Nlek13714 for lethality.