FB2026_01 , released March 12, 2026
FB2026_01 , released March 12, 2026
Natural Transposon: Dmel\1360
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General Information
Symbol
1360
Species
D. melanogaster
Feature type
natural_transposable_element
FlyBase ID
FBte0000559
Sequences and Components
Complete element (bp)

1176

1177

(Kaminker et al., 2002)

4480

(Kapitonov and Jurka, 2003)
Terminal repeat (bp)

37

Reference sequence
transposon_sequence_set.fa.gz   transposon_sequence_set.gff.gz
Component genes
1360\T
Sequence Accessions
GenBank Nucleotide - A collection of sequences from several sources, including GenBank, RefSeq, TPA, and PDB.
Sequence Ontology (SO)
Insertions and Copy Number
Copy number and comments

>25

105 in euchromatin of Release 3 genome annotation, of which 10 are full length.

(Kaminker et al., 2002)

17

(Kapitonov and Jurka, 2003)
Search for
Target Site Duplication
Size (bp)

6

7

(Linheiro and Bergman, 2012)
Orthologs
Curated drosophilid orthologs
Comments

The "Dr. D" repetitive sequence (described in FBrf0048918) contains sequences of both INE-1 and 1360 transposable elements.

(Locke et al., 1999)

A 1360 element has been cloned and sequenced. It is flanked by short inverted repeats. The 1360 element is present in approximately 10-30 euchromatic sites and also in numerous heterochromatic sites (in the chromocenter, pericentric heterochromatin, the fourth chromosome and at the telomeres) in the D.melanogaster genome. At least 6 variant 1360 elements differing in the length of the central region have been detected. The 1360 element has ARS activity, similar to the P-element.

(Kurenova et al., 1990)

In situ hybridization to polytene chromosomes shows variable, strain-specific location in the euchromatic parts of the arms and heavy labelling of the 12E region of the X chromosome, chromosome bases (20A--20F, 40A--40F, 41A--41F, 80A--80C and 81F), the chromocentre and chromosome 4.

(Kholodilov et al., 1988)
Other Information
Etymology
External Crossreferences and Linkouts ( 16 )
Crossreferences
GenBank Nucleotide - A collection of sequences from several sources, including GenBank, RefSeq, TPA, and PDB.
Synonyms and Secondary IDs (36)
Reported As
Symbol Synonym
1360
(Huang et al., 2025, Wierzbicki et al., 2023, Rigal et al., 2022, Huang et al., 2021, Kalashnikova et al., 2021, Rech et al., 2019, Villanueva-Cañas et al., 2019, Huisinga et al., 2016, Kofler et al., 2015, Rahman et al., 2015, Senti et al., 2015, Huang et al., 2014, Darricarrère et al., 2013, Thomae et al., 2013, Kofler et al., 2012, Linheiro and Bergman, 2012, Sienski et al., 2012, Méndez-Lago et al., 2011, Pane et al., 2011, Petrov et al., 2011, Wang and Elgin, 2011, Zhang and Pugh, 2011, González et al., 2010, Lu and Clark, 2010, Moshkovich and Lei, 2010, Deloger et al., 2009, Hamilton et al., 2009, Li et al., 2009, González et al., 2008, Kawamura et al., 2008, Marzo et al., 2008, Mugnier et al., 2008, Riddle et al., 2008, Riddle et al., 2008, Shi et al., 2008, Bhadra et al., 2007, Brennecke et al., 2007, Brower-Toland et al., 2007, Chen and Li, 2007, Grewal and Elgin, 2007, Gunawardane et al., 2007, Huisinga et al., 2007, Smith et al., 2007, Bergman et al., 2006, Haynes et al., 2006, Otsuna and Ito, 2006, Slawson et al., 2006, De Lucia et al., 2005, de Wit et al., 2005, Lipatov et al., 2005, Mito et al., 2005, Boussy and Itoh, 2004, Dimitri et al., 2003)
1360 element
(Sidorenko et al., 2019, Liu and Zhang, 2015, Sun et al., 2004)
1360 transposon
(Sun et al., 2004)
1360/Hoppel
(Myster et al., 2004)
CR31011
CR31276
CR31553
CR40447
(FlyBase Genome Annotators, 2002-2003)
Dm1360
DmHoppel
(Marsano et al., 2003)
Dr. D
(Locke et al., 2000)
EG:23E12.4
Hoppel
(Figueiredo et al., 2014, Savva et al., 2013, Saito et al., 2006, Reiss et al., 2003, Tritto et al., 2003, Rizzon et al., 2002, Locke et al., 2000, Pardue and Debaryshe, 2000, Locke et al., 1999, Locke et al., 1998, FlyBase, 1996-, Almeida Coelho and Sunkel, 1995)
Hoppel-like
(Marsano et al., 2003)
PROTOP
(Saint-Leandre et al., 2020, Olivieri et al., 2012, Slawson et al., 2006)
PROTOP B
(Brennecke et al., 2007)
PROTOP_A
(Saint-Leandre et al., 2020, Figueiredo et al., 2014, Satyaki et al., 2014, Olivieri et al., 2012, Zhou et al., 2009, Slawson et al., 2006)
PROTOP_B
(Stoffel et al., 2020, Figueiredo et al., 2014, Olivieri et al., 2012, Zhou et al., 2009, Slawson et al., 2006)
ProtoP
(Ohtani et al., 2013, Malone et al., 2009, Brennecke et al., 2008, Kapitonov and Jurka, 2003)
ProtoPA
(Ohtani et al., 2013)
ProtoPB
(Ohtani et al., 2013, Malone et al., 2009)
ProtoP_B
(Kapitonov and Jurka, 2003)
Protop
(Sytnikova et al., 2014)
Protop-B
(Sytnikova et al., 2014)
Protop_A
(Sytnikova et al., 2014)
anon-CH(3)336
hopel
(Leibovich, 1991, Leibovich et al., 1991)
hoppel
(Bhadra et al., 2007, Talbert and Henikoff, 2006, Gvozdev et al., 2005, Kavi et al., 2005, Steinemann and Steinemann, 2005, Boussy and Itoh, 2004, Hodgetts, 2004, Lerat et al., 2003, Maggert and Golic, 2002, Tulin et al., 2002, Aravin et al., 2001, van Steensel et al., 2001, Aravin et al., 2000, Gvozdev et al., 2000, Wallrath, 2000, Bejarano and Gonzalez, 1999, Cryderman et al., 1999, Dimitri et al., 1999, Locke et al., 1999, Spradling et al., 1999, Cryderman et al., 1998, Wallrath et al., 1998, Deak et al., 1997, FlyBase, 1996-, Kurenova, 1994.5.6, Kurenova et al., 1990)
hoppel(1360)
(Zaratiegui, 2007)
hoppel-like
(Sunkel, 1997.7.15)
protoP
(Czech et al., 2013)
protoP B
(Brennecke et al., 2008)
protoP-A
(Czech et al., 2013, Handler et al., 2011)
protoP-B
(Czech et al., 2013)
protop
(Kapitonov and Jurka, 1997-)
protop_b
(Kapitonov and Jurka, 1997-)
Secondary FlyBase IDs
  • FBgn0051553
  • FBgn0051276
  • FBgn0051011
  • FBgn0013399
  • FBgn0004180
  • FBgn0005673
  • FBtp0011398
  • FBgn0058447
References (146)