FB2026_03 , released September 17, 2026
Transcript: Dmel\sqd-RA
Open Close
General Information
Symbol
Dmel\sqd-RA
Species
D. melanogaster
Annotation Symbol
CG16901-RA
FlyBase ID
FBtr0082854
Feature type
Associated gene
Evidence Rank
Length (nt)
5551
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 713 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
    End(s) extend beyond the annotated transcript, internally consistent
    cDNA Clones, End Sequence Only (ESTs)
    Contained within the annotated transcript, internally consistent
    Sequence
    ATTCGTACGCGCGACTTTTTGGCGAGTGTGTATAAAAATCTCCGGCTCTGCGTAAAAAACGAATATCGTGCTGCCTAGCC
    CCCGAAATTAGTAGATCAGTCGAAAACACACAAAATGGCCGAGAACAAGCAAGTGGATACAGAAATAAACGGCGAGGATT
    TCACCAAGGACGTGACTGCCGACGGTCCGGGATCTGAAAATGGTGATGCGGGCGCCGCCGGCTCGACCAACGGCAGTTCG
    GACAACCAATCGGCCGCATCCGGCCAGCGGGACGACGACAGGAAACTGTTTGTCGGTGGTCTGAGCTGGGAAACGACTGA
    GAAGGAACTCCGCGATCACTTCGGCAAATATGGCGAGATCGAGAGCATCAATGTCAAGACAGATCCCCAGACCGGTCGGT
    CCCGAGGATTCGCCTTCATCGTGTTTACAAACACCGAGGCCATTGACAAAGTCAGCGCCGCGGATGAGCACATAATCAAC
    AGCAAGAAGGTCGATCCCAAGAAGGCCAAGGCCAGGCACGGCAAGATCTTTGTCGGCGGCCTCACCACAGAGATCAGCGA
    TGAGGAGATTAAGACCTACTTTGGACAGTTCGGCAATATCGTCGAGGTGGAGATGCCATTCGACAAGCAAAAGTCGCAGC
    GCAAAGGATTCTGCTTCATCACCTTCGATTCGGAGCAGGTGGTGACAGATTTGCTGAAGACGCCCAAGCAGAAGATCGCC
    GGCAAGGAGGTCGATGTTAAGCGTGCGACGCCCAAGCCGGAGAACCAGATGATGGGCGGTATGCGTGGTGGACCACGCGG
    TGGTATGCGCGGCGGACGCGGTGGCTACGGAGGACGAGGTGGCTACAACAACCAGTGGGACGGACAGGGATCATACGGCG
    GCTATGGCGGCGGCTACGGCGGATATGGTGCCGGTGGTTATGGCGACTACTATGCCGGCGGCTACTATAATGGATATGAC
    TACGGTTATGGTAAATACAACAAACAACAAAGTAGTGCTCAAAACAATTATTACAATAACAACACGTCGAGTAATTACCA
    TCAAAACAAGAACAATAGCAACAACTATCAGCAGTTCTAAGTAGAGCCTCAGCCGCATAGAGCTGGCCTGGCCAGCAACA
    AAATCAGAAAGAAATAATCAAACAAAGCAAACAACAACAACCGCAGAATATAAAAACCTTCTAATTTTTGCCATAGACCT
    GATCTGATCCAAAATTTCCACGTTGTTGTGTTTCCCATTCAAACAAAACTGAGAGAAAAACAAAAACAAAAAGTTTAGCT
    GCATTTCGATATATAGTACCATATATATATATATATATATATTTATATATGCTTATATACCGCATGCATTGTCTATATGC
    ATATTTGCATATAAATCATGTTGGTATATGATGTCAATGAACAACAACATCAAAAACAACAACAAGAACAAGAACAACTA
    CGAAAGCAACGTCGCTAAAAACAAGAAAACTTTTAAAAATTGTAGATTTGAAAGAGAGAAAACAAGAAACATTTCTTTAA
    TGCTAACATATAAATTTTAATCTAATCGTTCATTTTATATTGAAAAAAATGTGTATTTTGACAGACAATTTTCATCATTT
    AATAATAACAAGCAAAATCGCAATTTTTATATACACATTTATATCTATCTTATTAAATATAAACCTACGTATAATTTTAA
    AGGCATATAATTGATGTTTAAAATTTTAAAGCGTACCTTTTAAACGAGAATTCATTTAAACGAAACATTTAATTACCAAT
    TATTAGTTGAGTAGCATTTAAACATAAAACTGACGAAGCGTGTGTAAAAAAAAAGATGTGTTGTTAATAGAGTGAGAAGG
    AGCGATGAGAAAAGTAGACGTGACGTTCAAGTCGAGGCATATATAATGCTACCATCCTGCCATTTATATGCGACCACCAC
    CAGACCGGACCAACCAACAAACAACAACAACAACCAGAACAACATCAACAACAACTTGGTTGCCTTCAACAGACTTTCCA
    AAGATGACAAATACCTCAAACGCAAGGGCAGCAAACAAACAACCAGAAGAACAGAAAGAAACCCCAGACATAACAACAAA
    CAAAGAAACATGAAACACAAGAGAGGAGCATGTGCCAATTATGTGAAACTGTGTGAAACGCCAGTGTTTTTGGCCTTTTG
    CGCAATTGCAACTTGTGCCTTTTTTTAATTGTTAACTAAACTGTTATTGTTTGAACACACTGAAATCAAAATCTGTTGAA
    ACACACAAACACCCACACTACACACACACACCCACTTTCCCGCCAGCAATCCCATAAAATAGTTATTTAAATAGTTTCAC
    CTTTTGTTTTGTTTAACAAAACACTAAACAACAAGCAACCAGAACAGAAACGACAACAAACAAACAAAAAACAAAACACA
    CGAAACGCGTAATCAAAGCTTTGATTCAATGTCTATTTAAATATATATATACCTTATATATAGCATATAAATATATTTTT
    AGATACATATTATTATTCCGGCAACGGGATAATATTCACGTTCTTTGCAATGCATATGTTTTCGTATGCACCATACGTCA
    ATATACCTACCATATATATTTATATCAAATATATACAAATGTTATATATTTATACATAAAACGTAACATTTAACTATGGT
    ACTATTTTTGATAGTATTATTTTAAGGCAAATCCTTGTAAAAAACAACTACAATACGATAAGAGCACAACAACCAGAAGC
    TCTGAAAAGATCTGAAGGCCCCGGGGGGTCCAAAAAAGTCAGTGCAGTGCATCCGGGATATTATCATTCCGGTGGAACCA
    CTGCTGCAGCACCCCCCCGCAGCCTCATTCGTTAGATCGTTCTTTTATTTGCTTTATTTGCATTTCCGCTGCACTTTCTT
    GACCAAAACGTAACGTAATGTCCGAAGCAATCCATTTTTGAGGCTTGTCTTCAGTTGCACCGCTAGCGCATTGCGGCATT
    CTGCATGTTCATACGTTGATTCCAGGATAAAAAACCACAAACAAACAACTAACTAACTTACTGAACAACGACAAGTAATT
    ACAACTGCAATAGCAACATCAACAACATCTTAATTGTAGCAGTACAAAAATGCAACTTTTCCAACAAAAAAAAAAAAAAA
    AAAAGAAAGAAAGAAAAACGATTCATAAAAACACACTTCGTCAATTTTAGTAATTTTAATTCAAGCATATATACATATAT
    AATTTTTTCTTATGGTTTCACATACACAAGCATTGCTAATCGCAAATGTATATATAAATACCTCTTATAATTCGTATATC
    TTTGAATTTGAAATTTAGCAGAACCTTGAAATGAACTTTTTGCTAATAATTATCCTATCAAATGTTGTCAATGTGCGTCG
    ACAATTTGACTGTATACCAATTATATATACATTTGTACATTTACATACACCTTTAATCATAAACTTTGAGTAAATTGTTT
    TACAAAGAAATTGCATGTTTCTCAATGTTTTTAGCAAGTTGTCTGTATACAAAGAAAACCAAACAAAAAAATCTAGGCAA
    GATAAGAAAAAAATTTATTGACATTTATATTAAAGTTATCCCAGAAAGAAAAGTTTTTATATAAATTTTATGCTATATTT
    TTATTAATTAATATACCGATTATTATGATGTTTAAATGTGTAAACAAATTTTTTTGATATAAACAAAATTTTTGTATACC
    TTTACATATACTTACCATACAATTATAGCAATAATTTTGTGCCCCCACTTTATATTAAAACCCTAATAACAATATATTCT
    TAGACTTTATAATTTCCTATTCCGTTACTACTCTACAACTACAACTTGAAATTCTAAAACTAACCAACCAGACCACAAAA
    ATAAAAGTGCGGGGAGCTGTAGCTTAAGCACCGAGTTAGATCTGTTGAATAAATTAATGCCAAGTACGCAGATCGGGTGT
    TTCGGTTCCCACTCCCCGCATTTGTACCCGTTAATTATGTAATATTACTTTCGTAACTATGATTTTTGAACATATTTATA
    TACGATTATATGATTGTAAAACCGAATTTTCCGATGTTTCGCCTCACAAAAACGAAAAAAAAAAGAAATCAAACTAAACG
    AACCCAAAACATAAGTAAAAGAAACCCCAATGAGAGTTCAACTCAAAACACAGCCACCAACCACCCAAAAGCGAATATCC
    AAAAACGATCGCAAGCTGCGCGCCTTTGTCTTGTCCAAGCTTCTCGCAAGCGGTTAACCGATTGCCCGGCCGACCCGGTA
    ACCGATACAACCGGTGACCGAGGGTCCTTGGTGAGAACAACACCAGTAGAGCCACTATATCCATCTACTATCCACCGACA
    TCCGAACAAAGCAATCAATCAGGCAATCAAGCAACCAAGCGACCAGAGATCGAGCAATCGAGCGATCCGCCATGCAAAAC
    CGCACCAACAGTGTTAACTTTTCACTTAACTGTAACGTTTTTCATTTTTTACTTAAATCTTCCTTTTTCTATTACATTTA
    AAACGTATATATTTACAAGTAACTTAGCGTAATTAATATTTGTTTTTAGTAAAATGCATTGAAAAACTCTAAAAAAAAAA
    GAAGAAAGATGAAATGATAATATAATGGAACCACTAAAGTAATGAATGAATTAAAATATTGTCATACCGATTCTGAGACA
    ACTCTTAAGCTACAAATCCAGTTTTCTTGTTTTTAACAACAGCTACAACAACAACAGAAATGAACACGAAGAGTAATTAT
    TATAATCATTATATTAACTCGAGAGTATAAAGTAAAATTTGTTGACTATTTGCATTTGTTTTTGTTTTTCGCAAAACGTT
    TTCTATGACACGCAAAATAATAATATATTCGCGACAGACCACTCCGCATCCTCATCCCCCTTCCCTTCCCCCTTGACCAG
    CCTTGTAATTCCCGAAGATCCTTCAATGGGAGTGATATAAAAGAAAATTCACGAAAAATTCAAAATGATCATTTTATTAC
    TTTTTGCTGAGGTGAGACATTCAAAATACACACACACAAGAGCAGCAAATGAATTCACAAATTTTTTTGGCAAAAACCTT
    ACAAAATTATTTACCGAATATTTTCAATCGAACGTTTACAAAGTAATTAATTTGAAATTGAAATGCTGAAATTGTTGTGT
    GGAAAATGAGGTAAAAATTAAAAAACATAAATGCATAACGAGTGCTGTAAGGAAATGAGAAATCGAATGAATTGAAATAT
    CCATTGCAATACATTGTGAAACATGTTAATAAGTCGAGTCGCGTCCGGTCGACAACTAACCAAAATCTGAGACAACAACC
    AGAGTTATATTATATAATTATATATAACGAAGCGAAATAACAACCACCAATCCAATCGAGAACCGCATGTATGTGTGAGC
    GCCGCCTTGCGCCATTTTCCTCGACATTTGCAAGAGGAAAGCGAGTGAAAATTGTTTTTTAAATTTTTATTGTGTACCAG
    CAACCAACAGCTACAACAATCGACAACTACACATGTTAGAGCAACATTTTAACCATCAATCTTATAATCAAAATCCACAA
    ACAAGAAAAATGAGCAAATAAAAGAAAAACG
    
    Other Products of this Gene
    Other Transcripts
    Name
    FlyBase ID
    Length (nt)
    FBtr0082855
    2115
    FBtr0082856
    2239
    FBtr0082857
    1983
    FBtr0309094
    2844
    Polypeptides
    Derived from THIS transcript
    Name
    FlyBase ID
    Length (aa)
    FBpp0082319
    321
    Derived from OTHER transcripts
    Name
    FlyBase ID
    Length (aa)
    FBpp0082320
    344
    FBpp0082321
    308
    FBpp0089309
    178
    FBpp0301102
    308
    Comments

    Transcript terminates at site supported by polyadenylated cDNA.

    Extended 3' UTR based on EST, cDNA and RNA-Seq data.

    External Crossreferences and Linkouts ( 1 )
    Crossreferences
    RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
    Synonyms and Secondary IDs (4)
    Reported As
    Symbol Synonym
    CG16901-RA
    sqd+R1.5
    sqdA
    Secondary FlyBase IDs
    • FBtr0000581
    • FBtr0000582
    References (4)