FB2026_01 , released March 12, 2026
FB2026_01 , released March 12, 2026
Transcript: Dmel\nAChRα4-RD
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General Information
Symbol
Dmel\nAChRα4-RD
Species
D. melanogaster
Annotation Symbol
CG12414-RD
FlyBase ID
FBtr0308330
Feature type
Associated gene
Evidence Rank
Length (nt)
5464
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 52 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
    End(s) extend beyond the annotated transcript, internally consistent
      cDNA Clones, End Sequence Only (ESTs)
      End(s) extend beyond the annotated transcript, internally consistent
      Sequence
      TATCTAGTTTCAACCGACAATTCAATGGTTTGATAATCAATTCGCGACTCCATGACAAAATTCTATATTTAATGATGTAA
      CAATTACACGTTTCTGTGTATAAATAATTAAATTGTATGTTGCTTATCCTGAGTATTGTGCAATGCGGACGGTACATTTA
      ATAATTCGCTTACGTGATAAATAAGTGGCATGAAAAATATTTGCAAGCAATAATACATTGCCATTTTAGGCTTAGTCCGC
      TACCTAACTGAAAGTGTTATTGACCAAAATAAGAATAGGAATACATAGTTCTAAAAAGGCACTTCGTATATTAAAAATTA
      TACATTCTTCACAAACTATTGGTCGCTAAAGGACATCCTAAATAAGACGATAAACTATACGTATTTTAAGCAAGGAATTA
      AAGTTGGAGACCACAGCACAATGAAGTTTTTATTTGAAATATTAAGACTTTTTATTAAAAAGCCGTCTTCGGGCGGAACC
      CTCAGAGCTTGGATACTTTCCGCACTCATGGTACATGGAGCAGTGGCTGGAAACCCGGACGCAAAACGGTTATATGATGA
      TCTTTTAAGCAACTACAACAAATTAGTTAGACCTGTTGTTAATACGACAGATGTTCTAAAAGTTTGCATTAAATTAAAAC
      TTTCACAGCTTATAGATGTGAACCTAAAAAATCAAATTATGACCACCAATCTTTGGGTCGAGCAGTCGTGGTATGATTAC
      AAACTTCGTTGGGAACCTAAAGAATATGGTGGAGTTCATATGCTGCATGTTCCTTCAGATCATATATGGAGACCGGATAT
      TGTCCTTTATAATAAGTTGATCTGAGGCACATGGATGAACAACAGGGCAGCAACGTTGTTGCTGTGGGTGTGGACCTATC
      TGAATTTTATATGTCTGTGGAATGGGACATTCTCGAAGTTCCAGCTGTTAGGAATGAAAAGTTTTATACTTGTTGCGACG
      AACCATACTTGGACATCACATTTAATATAACAATGAGAAGGAAGACGCTTTTTTATACTGTTAATATAATAATACCGTGC
      ATGGGAATATCATTTTTAACTGTATTAACATTTTACCTTCCATCGGATAGTGGAGAAAAGGTCACACTATCTATCTCCAT
      TCTTATTAGTCTTCACGTGTTCTTTCTTTTGGTGGTTGAAATTATACCACCAACGTCATTGGTTGTTCCTTTGCTGGGAA
      AATACCTAATATTTGCCATGATACTTGTGTCTATCAGTATCTGCGTGACGGTTGTTGTTTTGAACGTTCATTTTCGTTCA
      CCTCAAACTCATAAAATGGCACCCTGGGTTAAGCGCGTCTTTATTGACTTTTTGCCAGCGTTTTTATTCATTAAAAGGCC
      GACGTACAACTTTGAAACGAGTAAATTACTTTTAAAGGACACACATGCTTGCTTTTATCCTTATTATTCTGCAACAAATA
      TCGATCGACTCGTGTCTTCAGGATACAACAATAGTCTGCCAAAAGAAGATTTATCGCAAAGCATTACGGCGAATGGACCA
      TTTGGAGGAAGTTGTCAGGTTCATGGCCCAGTGCCGCCACTCACCCATTGTAGTTCAGACGAAATAGCCGCCGTCCCCGA
      TATGGATATCGGACCCTTAGGGATGAAAAGTCCCATTTTAAATAATCCAGCATTTTCCCACTCTAAATGCCTTCCTAAAA
      TTCACAAAAGCTGTTTTTGTGTGCGCTTTATTGCAGAGCATACAAAAATGCAAGAGGACTCAACTAAAGTTAAAGAGGAT
      TGGAAATACGTTGCTATGGTATTGGATAGACTTTTTTTGTGGATATTCACGTTGGCAGTTGTGGTTGGGACCGCCGGAAT
      AATTTTACAAGCTCCTACGTTATATGACGACCGCATCCCGATTATTGAGCAAAAGGATTTGGACTTTTCAGGAACATCAG
      CCGGTCGCTGTAGACCTCCACAATAACATTATTATATTAAAAGAATTTAATTTTAAACTGAGGTGTATCAGATTATTATT
      ACAAAATGAACTTTAACTAATATTTTCTGCAGGAAAAAATGTTAAAAATTACATATGTGTGTATTGAAGGCTTTAAGTAA
      CAAATTACCTATTTTTTATTTTTGACCACATTTAGATATTCCAAAGTAATTTGGTATTCTTAGGCACTTCAAACCACGAC
      ATTTTTTTTATTTATCCTTGTCAACGAACTTAAAGAATAAAATTTTAACATTTTAATCTTAAACCAGAAATGCAGAAATG
      TTGATTACGATCTTACATATTCGAAAGAGCACACAAAACAACAAATCCATAAAGTGTTCAGCTTTTCAAATATACATTTA
      CAAGAAAAACGGTTTAGTGTGAAAATAGCTTCGAAGAAGTGCAATCATCCGTTACTCGTAGAAAAAAAGGGTACACTAGA
      TTCGATGAAGGAAAAGGCTTAATCGCATAAGGAGTATTAATTCGATGCAATGTCCGTCGGTTAGTCTGTATAAATGTCAA
      GATGTCTCAGCTTAAGTTTGTTTAAGATTGTTGCCATGCCCGCATTAACGAATAAAACCCGCTCAAAACTGTCACCCAAA
      TAATTTTCAGCTCTACGACGCATATTAAAAAAAGATGTCTTGTACATTTTTTTTAGAGCAAAGGCTATTGAGGCATTCAC
      CAGTCGCATGTCGACTACCCCATGCAAATAAATGAAACTGTAAACTTGTTGTGCAGATTCTACCGTACTTTTTTTTCAGT
      CGGAGAATACCGACTGGCTACGCTTCATGAGGATACAAATTTTTATGAGATGATTAGTATTTATTTCATATTTAATTAGT
      AATAGCATCATTTAAAAATTAATATCTTTGTGAGTTCGATGTAGTTGAGTTTCCCAACTATTAGATACCTGTTACTCAAC
      TAGTAGAAGTGCGAACAAGAAATTTTAAAAACTTTATTGCATATGGATAAAAATTGGGAAAAAATAAAATGAAGAAAACA
      AATTTTTTAATTTTTCAAAAGAATGGGCGATATAGTTCTGGACGGTTTGTTTGTCTTCGAAAAGGCGTGGCCAAAATGTT
      ATAAAACAAAAAATTGGCAGGACAAATAATAAACGAAAAAACACCAAAACATTTGTCAGAATGTTGGGCGAGGCAGTCTT
      ACCTGGATCGTGGGCGTATAAAGATCAACTTAAAAATTAACTTTCTAGCTATCATGGCCACATCGAGTCGGATATTGAGA
      AAAATACTTAACAGGGTCTGAGACGATTCCAACTACTTGATACCTACTTTATATCGAATCTAGTACACTCCTTTATTCAA
      AGGGTATTAAAATTCCGAAATAGGCAAATTATTTCAATATGTCAATAGACAGTTTACAAAAACTCTTATATATAATATAC
      AATGTATGGTATTGTTTTCAACTTGCATTTTCAATCACTTATTCGTACACTTAAGTTCACTTATGTGCGTACAATTTTTT
      TCCAGGACAATATTAATTGACATAGCATAACATTTTGGAGGCGTTACACATGTCGTGAGCATTAAGTATTTCCGGCGGTT
      CTATTTATTTTGTTTATGACAATATTCAATTTTAATTTTAAACACGAATGGATATATATTTTCTAGCCATATCCGTTTGC
      TCGAAAGCTTGTCTGCTGCTCTTTTTTCCGCCCGAAAGAATCTTGAGAGGTTACGAACTTTACATTTCGGCAAGACGATT
      ATTATATATCCTTGAATGGGTGTGCCGAAAATAAACAGTTTTTATGTTGAATATCTTCAAATAATTATTCGACGGTTCAT
      ATGACAGCTACATAAGTATTCGAAATAGTTTTGAGATTATAATTGAAATAAACCCGAAATGTTCAAATAGCTGGTATATA
      CCGAACTGAAGCCTATCATGATCAGAAACAACGAAGCTTAGATTTCATTCCCATTATTTATTTTATATAGTGGTCGTCTT
      TAACCCATATTGAAGCAAAAATAATTAATGACAAAACGCAGAACAAAACAAATTATGATCAAAACAAAGGAAGAACCTTT
      TATTTTCTTACGATTATTCTTATTCCAGCTATTTTATGAGTGGTCCGATCCAGCCCCTTCCGACTTTTTTATAATAAAAA
      GAGACTTGTTCACAAATTGTATGCAGATAATTTGCGTAGAAAATGACAGACAGACGGATCTACGGTCATAGCTATATCGA
      CTCGGCTGTTAACTCTTGATACTGATGACCGAAATCAATATGCAACGGTATAAAAATAACATTATTACATTTACATTAAC
      ATTTACATTATAAGAAATATGAGATCACATCTCAGACAAATAGTCTAACCCTACGAGGCACGTAAACTTTCCGTCGTACT
      GAAGTCTTAAACTCTGCAAAGTCCTGTCACCCTACCCTTGTACGGGTGGTTGTAAATCAATCGTATAACTTTGTTTCTTC
      TCCCGCCCACTTAGCGAACCGAAACCGCCAACAACGCTCAGTGCAGTCGCCCACACTTCTTTTATGTTTGACGCACACGA
      ACCGCCCAAAACTCCAACGCCCACACTTATAAACATTTCATTTATTTTTGTCATTTTAATCCACAATATCTATCGATATG
      ACAGAAAAACTATGAAATTTCGCGTTGGCAATTCCGCTAGCTGAGTAACGGGTATCTGCAAGTCAAGCATTAGCATTAGT
      CGTTCTCTCTTGCAAACAATCTAATTTTCCTTTTCCATGCCCCAAGGAATTACAATAAATGAAACCCCTCGAATTGCCAA
      TCTCGAAAAAATTAGTTTTTTCTGCCGTTTTTGAATATCTGCACTTCCTTCGTAATCCCACTGGGTATCTCGCATATGAT
      GGTCAAAGAAATTTACTGTTTTTTTGATTTGTTTTAGAAATACTATTTTAAATTTGTCTCCCTGCCTTTGTTGTTTTAAA
      TAAATGGATGGAGAAGGCAAAAGAGCCGACGAGCCATGGTATTTATACATTTTAAATTGATCCAAAAAGTAAAATAAAAG
      TAGTTTGCTATATCTAGATGGCGTTGAATATTACTGTCCAACTAACCAAAGTTCACTTGTCTCAGATTTTAACTTAATTT
      GGAGCTTTATACAGTATACAGAAGATTTTATTTCACCACCTATCATAATTCAAATTAAAATTGTTTTTGAAATAGTAAAG
      CGGTAAATTAAAAACTATATGTCTATGAAAATCTGTCTATAAAAATATGTATAATTTGATTAAATTAATTTTTCATTTGT
      AAGAATTACTATAATTATTTAAAATTTAAAAACTCTTGTACGGCTTTTTGACTCAAAATCTTTGCTTACAAAAAAGATTT
      GTCCCCGCATAAGTCAACACGGTGTTGACATGGTGTTCTCATGGTACTCAAAAATAATTAAGTATGTATCAAAGTATTAG
      TGCGAAAAAATGTGAAATAGAAAGTTAACATTTTAGCATATAGGAATACAACTATTAAAATGAATTTAAATGTATGAATT
      TGTTACAAAATAAAGTTAATTTAT
      
      Other Products of this Gene
      Other Transcripts
      Name
      FlyBase ID
      Length (nt)
      FBtr0300118
      5645
      FBtr0308331
      1509
      FBtr0308332
      2354
      FBtr0332872
      2281
      FBtr0346707
      5645
      Polypeptides
      Derived from THIS transcript
      Name
      FlyBase ID
      Length (aa)
      FBpp0300649
      371
      Derived from OTHER transcripts
      Name
      FlyBase ID
      Length (aa)
      FBpp0289395
      539
      FBpp0300650
      384
      FBpp0300651
      371
      FBpp0305094
      499
      FBpp0312320
      539
      Comments

      Based on cDNA(s) that contain premature stop codon and/or downstream start; may or may not produce functional polypeptide.

      Unconventional splice site postulated (GA-AG); supported by multiple cDNAs, RNA-seq data, and conservation across close Drosophila species.

      Extended 3' UTR based on RNA-Seq and/or EST data.

      transcript_exception: non_canonical_splice_site

      External Crossreferences and Linkouts ( 1 )
      Crossreferences
      RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
      Synonyms and Secondary IDs (2)
      Reported As
      Symbol Synonym
      nAChRα4-RD
      nAcRα-80B-RD
      Secondary FlyBase IDs
        References (0)